RNA–Protein interactions for RNA: ENST00000443824.5

CTPS2-203, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTPS2, Length 4,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-203ENST00000443824 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
CTPS2-203ENST00000443824 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
CTPS2-203ENST00000443824 FYCO1Q9BQS8 1478 aa16.56■□□□□ 0.24
CTPS2-203ENST00000443824 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
CTPS2-203ENST00000443824 GTF3C3Q9Y5Q9 886 aa16.55■□□□□ 0.24
CTPS2-203ENST00000443824 WASHC2CQ9Y4E1 1318 aa16.55■□□□□ 0.24
CTPS2-203ENST00000443824 KANK1Q14678 1352 aa16.54■□□□□ 0.24
CTPS2-203ENST00000443824 HNRNPUQ00839 825 aaKnown RBP eCLIP16.53■□□□□ 0.24
CTPS2-203ENST00000443824 EFCAB5A4FU69 1503 aa16.52■□□□□ 0.24
CTPS2-203ENST00000443824 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
CTPS2-203ENST00000443824 STK26Q9P289 416 aa16.51■□□□□ 0.23
CTPS2-203ENST00000443824 HSPA5P11021 654 aaKnown RBP16.51■□□□□ 0.23
CTPS2-203ENST00000443824 RAPGEF3O95398 923 aa16.5■□□□□ 0.23
CTPS2-203ENST00000443824 CUL7Q14999 1698 aa16.5■□□□□ 0.23
CTPS2-203ENST00000443824 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
CTPS2-203ENST00000443824 SLC24A1O60721 1099 aa16.48■□□□□ 0.23
CTPS2-203ENST00000443824 UACAQ9BZF9 1416 aa16.47■□□□□ 0.23
CTPS2-203ENST00000443824 PCF11O94913 1555 aaKnown RBP16.47■□□□□ 0.23
CTPS2-203ENST00000443824 ACIN1Q9UKV3 1341 aaKnown RBP16.47■□□□□ 0.23
CTPS2-203ENST00000443824 TROQ12816 1431 aaPredicted RBP16.47■□□□□ 0.23
CTPS2-203ENST00000443824 TIAM1Q13009 1591 aa16.47■□□□□ 0.23
CTPS2-203ENST00000443824 KIF15Q9NS87 1388 aa16.46■□□□□ 0.23
CTPS2-203ENST00000443824 C14orf37Q86TY3 774 aa16.45■□□□□ 0.22
CTPS2-203ENST00000443824 POGKQ9P215 609 aa16.44■□□□□ 0.22
CTPS2-203ENST00000443824 RRBP1Q9P2E9 1410 aaKnown RBP16.43■□□□□ 0.22
CTPS2-203ENST00000443824 TNNT2P45379 298 aaPredicted RBP16.43■□□□□ 0.22
CTPS2-203ENST00000443824 TIMELESSQ9UNS1 1208 aa16.42■□□□□ 0.22
CTPS2-203ENST00000443824 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
CTPS2-203ENST00000443824 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
CTPS2-203ENST00000443824 CC2D1BQ5T0F9 858 aaKnown RBP16.39■□□□□ 0.21
CTPS2-203ENST00000443824 ANKRD50Q9ULJ7 1429 aa16.39■□□□□ 0.21
CTPS2-203ENST00000443824 WDR62O43379 1518 aa16.38■□□□□ 0.21
CTPS2-203ENST00000443824 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
CTPS2-203ENST00000443824 SCAPERQ9BY12 1400 aa16.38■□□□□ 0.21
CTPS2-203ENST00000443824 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
CTPS2-203ENST00000443824 BCL11AQ9H165 835 aa16.37■□□□□ 0.21
CTPS2-203ENST00000443824 ZBTB7CA1YPR0 619 aa16.36■□□□□ 0.21
CTPS2-203ENST00000443824 PPM1GO15355 546 aaPredicted RBP16.36■□□□□ 0.21
CTPS2-203ENST00000443824 HECW1Q76N89 1606 aa16.35■□□□□ 0.21
CTPS2-203ENST00000443824 KNSTRNQ9Y448 316 aa16.34■□□□□ 0.21
CTPS2-203ENST00000443824 ROCK2O75116 1388 aaKnown RBP16.34■□□□□ 0.21
CTPS2-203ENST00000443824 EHBP1L1Q8N3D4 1523 aa16.33■□□□□ 0.2
CTPS2-203ENST00000443824 TRAK1Q9UPV9 953 aa16.33■□□□□ 0.2
CTPS2-203ENST00000443824 ST20-MTHFSA0A0A6YYL1 179 aa16.32■□□□□ 0.2
CTPS2-203ENST00000443824 SRPK2P78362 688 aaKnown RBP16.31■□□□□ 0.2
CTPS2-203ENST00000443824 CCDC144AA2RUR9 1427 aa16.31■□□□□ 0.2
CTPS2-203ENST00000443824 NEFMP07197 916 aa16.31■□□□□ 0.2
CTPS2-203ENST00000443824 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
CTPS2-203ENST00000443824 NUTM2FA1L443 756 aa16.31■□□□□ 0.2
CTPS2-203ENST00000443824 SOX12O15370 315 aa16.3■□□□□ 0.2
CTPS2-203ENST00000443824 TMF1P82094 1093 aa16.3■□□□□ 0.2
CTPS2-203ENST00000443824 IRX6P78412 446 aaPredicted RBP16.3■□□□□ 0.2
CTPS2-203ENST00000443824 C9orf84Q5VXU9 1444 aa16.3■□□□□ 0.2
CTPS2-203ENST00000443824 THOC2Q8NI27 1593 aaKnown RBP16.29■□□□□ 0.2
CTPS2-203ENST00000443824 LMOD2Q6P5Q4 547 aa16.29■□□□□ 0.2
CTPS2-203ENST00000443824 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
CTPS2-203ENST00000443824 ATP10BO94823 1461 aa16.29■□□□□ 0.2
CTPS2-203ENST00000443824 MIA2Q96PC5 1412 aa16.28■□□□□ 0.2
CTPS2-203ENST00000443824 NUP153P49790 1475 aaKnown RBP16.27■□□□□ 0.19
CTPS2-203ENST00000443824 DAPK1P53355 1430 aa16.26■□□□□ 0.19
CTPS2-203ENST00000443824 FKBP8Q14318 412 aa16.26■□□□□ 0.19
CTPS2-203ENST00000443824 TARBP1Q13395 1621 aaKnown RBP16.26■□□□□ 0.19
CTPS2-203ENST00000443824 CDCA8Q53HL2 280 aa16.26■□□□□ 0.19
CTPS2-203ENST00000443824 NEUROD2Q15784 382 aa16.25■□□□□ 0.19
CTPS2-203ENST00000443824 NAIPQ13075 1403 aa16.24■□□□□ 0.19
CTPS2-203ENST00000443824 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
CTPS2-203ENST00000443824 SUPT6HQ7KZ85 1726 aaKnown RBP16.24■□□□□ 0.19
CTPS2-203ENST00000443824 CD109Q6YHK3 1445 aa16.23■□□□□ 0.19
CTPS2-203ENST00000443824 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
CTPS2-203ENST00000443824 ABCC5O15440 1437 aa16.22■□□□□ 0.19
CTPS2-203ENST00000443824 HFM1A2PYH4 1435 aa16.22■□□□□ 0.19
CTPS2-203ENST00000443824 TMEM132EQ6IEE7 984 aa16.21■□□□□ 0.19
CTPS2-203ENST00000443824 DISP1Q96F81 1524 aa16.21■□□□□ 0.19
CTPS2-203ENST00000443824 NUP160Q12769 1436 aa16.21■□□□□ 0.19
CTPS2-203ENST00000443824 PTPRKQ15262 1439 aa16.21■□□□□ 0.18
CTPS2-203ENST00000443824 HDGFP51858 240 aaKnown RBP16.21■□□□□ 0.18
CTPS2-203ENST00000443824 NBPF8Q3BBV2 869 aa16.2■□□□□ 0.18
CTPS2-203ENST00000443824 NBPF1Q3BBV0 1214 aa16.19■□□□□ 0.18
CTPS2-203ENST00000443824 CAMSAP2Q08AD1 1489 aa16.18■□□□□ 0.18
CTPS2-203ENST00000443824 UGGT2Q9NYU1 1516 aa16.18■□□□□ 0.18
CTPS2-203ENST00000443824 GPATCH8Q9UKJ3 1502 aaKnown RBP16.17■□□□□ 0.18
CTPS2-203ENST00000443824 PBRM1Q86U86 1689 aa16.17■□□□□ 0.18
CTPS2-203ENST00000443824 CFAP70Q5T0N1 1121 aa16.16■□□□□ 0.18
CTPS2-203ENST00000443824 CTTNBP2Q8WZ74 1663 aa16.16■□□□□ 0.18
CTPS2-203ENST00000443824 ERICH6Q7L0X2 663 aa16.15■□□□□ 0.18
CTPS2-203ENST00000443824 KIAA0556O60303 1618 aa16.15■□□□□ 0.18
CTPS2-203ENST00000443824 CEP170Q5SW79 1584 aa16.14■□□□□ 0.17
CTPS2-203ENST00000443824 MAP3K1Q13233 1512 aa16.14■□□□□ 0.17
CTPS2-203ENST00000443824 RAPGEF6Q8TEU7 1601 aa16.14■□□□□ 0.17
CTPS2-203ENST00000443824 PTPN23Q9H3S7 1636 aa16.14■□□□□ 0.17
CTPS2-203ENST00000443824 VGFO15240 615 aaPredicted RBP16.13■□□□□ 0.17
CTPS2-203ENST00000443824 EID1Q9Y6B2 187 aa16.13■□□□□ 0.17
CTPS2-203ENST00000443824 ASXL2Q76L83 1435 aa16.13■□□□□ 0.17
CTPS2-203ENST00000443824 NCOA1Q15788 1441 aa16.13■□□□□ 0.17
CTPS2-203ENST00000443824 U2SURPO15042 1029 aaKnown RBP16.13■□□□□ 0.17
CTPS2-203ENST00000443824 MINK1Q8N4C8 1332 aaPredicted RBP16.12■□□□□ 0.17
CTPS2-203ENST00000443824 USP47Q96K76 1375 aa16.12■□□□□ 0.17
CTPS2-203ENST00000443824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.1■□□□□ 0.17
CTPS2-203ENST00000443824 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
CTPS2-203ENST00000443824 ADGRL1O94910 1474 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms