RNA–Protein interactions for RNA: ENST00000443501.1

FNDC3B-206, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-206ENST00000443501 GOLGA3Q08378 1498 aa14.19□□□□□ -0.14
FNDC3B-206ENST00000443501 U3KPZ7 1027 aaPredicted RBP14.19□□□□□ -0.14
FNDC3B-206ENST00000443501 FANCAO15360 1455 aa14.18□□□□□ -0.14
FNDC3B-206ENST00000443501 ATP10BO94823 1461 aa14.16□□□□□ -0.14
FNDC3B-206ENST00000443501 IQSEC2Q5JU85 1478 aa14.16□□□□□ -0.14
FNDC3B-206ENST00000443501 TTC37Q6PGP7 1564 aa14.16□□□□□ -0.14
FNDC3B-206ENST00000443501 AKNAQ7Z591 1439 aa14.15□□□□□ -0.14
FNDC3B-206ENST00000443501 FHOD3Q2V2M9 1422 aa14.15□□□□□ -0.14
FNDC3B-206ENST00000443501 STRCQ7RTU9 1775 aa14.14□□□□□ -0.15
FNDC3B-206ENST00000443501 DENND4BO75064 1496 aaPredicted RBP14.13□□□□□ -0.15
FNDC3B-206ENST00000443501 ATXN8OSP0DMR3 200 aa14.13□□□□□ -0.15
FNDC3B-206ENST00000443501 PTPRTO14522 1441 aa14.13□□□□□ -0.15
FNDC3B-206ENST00000443501 PREX1Q8TCU6 1659 aa14.13□□□□□ -0.15
FNDC3B-206ENST00000443501 LTBP4Q8N2S1 1624 aa14.11□□□□□ -0.15
FNDC3B-206ENST00000443501 RICTORQ6R327 1708 aa14.1□□□□□ -0.15
FNDC3B-206ENST00000443501 ZMYM4Q5VZL5 1548 aa14.1□□□□□ -0.15
FNDC3B-206ENST00000443501 ARID3CA6NKF2 412 aa14.09□□□□□ -0.15
FNDC3B-206ENST00000443501 FAM9AQ8IZU1 332 aaPredicted RBP14.09□□□□□ -0.15
FNDC3B-206ENST00000443501 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
FNDC3B-206ENST00000443501 MAGI2Q86UL8 1455 aa14.09□□□□□ -0.15
FNDC3B-206ENST00000443501 SIGLEC1Q9BZZ2 1709 aa14.09□□□□□ -0.15
FNDC3B-206ENST00000443501 FER1L4A9Z1Z3 1794 aa14.09□□□□□ -0.15
FNDC3B-206ENST00000443501 MLECQ14165 292 aa14.08□□□□□ -0.16
FNDC3B-206ENST00000443501 ZFYVE16Q7Z3T8 1539 aa14.08□□□□□ -0.16
FNDC3B-206ENST00000443501 EFCAB5A4FU69 1503 aa14.07□□□□□ -0.16
FNDC3B-206ENST00000443501 ARHGEF12Q9NZN5 1544 aa14.07□□□□□ -0.16
FNDC3B-206ENST00000443501 UHRF1BP1Q6BDS2 1440 aa14.07□□□□□ -0.16
FNDC3B-206ENST00000443501 CTTNBP2Q8WZ74 1663 aa14.05□□□□□ -0.16
FNDC3B-206ENST00000443501 CEBPAP49715 358 aaPredicted RBP14.04□□□□□ -0.16
FNDC3B-206ENST00000443501 CFAP74Q9C0B2 1584 aa14.01□□□□□ -0.17
FNDC3B-206ENST00000443501 HECW1Q76N89 1606 aa13.99□□□□□ -0.17
FNDC3B-206ENST00000443501 ATP10AO60312 1499 aa13.99□□□□□ -0.17
FNDC3B-206ENST00000443501 UBAP1LF5GYI3 381 aa13.98□□□□□ -0.17
FNDC3B-206ENST00000443501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
FNDC3B-206ENST00000443501 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
FNDC3B-206ENST00000443501 SETD1BQ9UPS6 1966 aaKnown RBP13.97□□□□□ -0.17
FNDC3B-206ENST00000443501 C9orf84Q5VXU9 1444 aa13.97□□□□□ -0.17
FNDC3B-206ENST00000443501 NCOA1Q15788 1441 aa13.96□□□□□ -0.18
FNDC3B-206ENST00000443501 SAMD1Q6SPF0 538 aaPredicted RBP13.95□□□□□ -0.18
FNDC3B-206ENST00000443501 MED1Q15648 1581 aaPredicted RBP13.95□□□□□ -0.18
FNDC3B-206ENST00000443501 RAPGEF6Q8TEU7 1601 aa13.94□□□□□ -0.18
FNDC3B-206ENST00000443501 P3H3Q8IVL6 736 aa13.94□□□□□ -0.18
FNDC3B-206ENST00000443501 PLEKHD1A6NEE1 506 aa13.93□□□□□ -0.18
FNDC3B-206ENST00000443501 NUP153P49790 1475 aaKnown RBP13.93□□□□□ -0.18
FNDC3B-206ENST00000443501 SCAPERQ9BY12 1400 aa13.92□□□□□ -0.18
FNDC3B-206ENST00000443501 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.92□□□□□ -0.18
FNDC3B-206ENST00000443501 TRAPPC8Q9Y2L5 1435 aa13.9□□□□□ -0.18
FNDC3B-206ENST00000443501 PRXQ9BXM0 1461 aa13.89□□□□□ -0.19
FNDC3B-206ENST00000443501 HSPA1LP34931 641 aa13.89□□□□□ -0.19
FNDC3B-206ENST00000443501 ZNF335Q9H4Z2 1342 aaPredicted RBP13.89□□□□□ -0.19
FNDC3B-206ENST00000443501 SAMD9Q5K651 1589 aa13.88□□□□□ -0.19
FNDC3B-206ENST00000443501 C3P01024 1663 aa13.86□□□□□ -0.19
FNDC3B-206ENST00000443501 PLCH2O75038 1416 aa13.86□□□□□ -0.19
FNDC3B-206ENST00000443501 RNF39Q9H2S5 420 aa13.85□□□□□ -0.19
FNDC3B-206ENST00000443501 CAMSAP1Q5T5Y3 1602 aa13.84□□□□□ -0.19
FNDC3B-206ENST00000443501 REREQ9P2R6 1566 aa13.83□□□□□ -0.19
FNDC3B-206ENST00000443501 ESF1Q9H501 851 aaKnown RBP13.82□□□□□ -0.2
FNDC3B-206ENST00000443501 NCKAP5LQ9HCH0 1330 aa13.82□□□□□ -0.2
FNDC3B-206ENST00000443501 ZNF518AQ6AHZ1 1483 aa13.81□□□□□ -0.2
FNDC3B-206ENST00000443501 AGLP35573 1532 aa13.81□□□□□ -0.2
FNDC3B-206ENST00000443501 PKD2Q13563 968 aa13.81□□□□□ -0.2
FNDC3B-206ENST00000443501 EFCAB2Q5VUJ9 269 aa13.81□□□□□ -0.2
FNDC3B-206ENST00000443501 NPATQ14207 1427 aa13.81□□□□□ -0.2
FNDC3B-206ENST00000443501 CNTLNQ9NXG0 1405 aa13.8□□□□□ -0.2
FNDC3B-206ENST00000443501 TOM1O60784 492 aa13.79□□□□□ -0.2
FNDC3B-206ENST00000443501 PLA2R1Q13018 1463 aa13.79□□□□□ -0.2
FNDC3B-206ENST00000443501 KDM5CP41229 1560 aa13.79□□□□□ -0.2
FNDC3B-206ENST00000443501 PIP4K2BP78356 416 aa13.78□□□□□ -0.2
FNDC3B-206ENST00000443501 DIP2CQ9Y2E4 1556 aa13.78□□□□□ -0.2
FNDC3B-206ENST00000443501 TCOF1Q13428 1488 aaKnown RBP13.77□□□□□ -0.21
FNDC3B-206ENST00000443501 AFAP1Q8N556 730 aa13.77□□□□□ -0.21
FNDC3B-206ENST00000443501 MLH3Q9UHC1 1453 aa13.74□□□□□ -0.21
FNDC3B-206ENST00000443501 SPINK5Q9NQ38 1064 aaPredicted RBP13.72□□□□□ -0.21
FNDC3B-206ENST00000443501 MYT1LQ9UL68 1186 aa13.72□□□□□ -0.21
FNDC3B-206ENST00000443501 CPS1P31327 1500 aa13.72□□□□□ -0.21
FNDC3B-206ENST00000443501 ABCA6Q8N139 1617 aa13.72□□□□□ -0.21
FNDC3B-206ENST00000443501 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
FNDC3B-206ENST00000443501 ZMYM3Q14202 1370 aa13.71□□□□□ -0.22
FNDC3B-206ENST00000443501 MROH2AA6NES4 1674 aa13.7□□□□□ -0.22
FNDC3B-206ENST00000443501 PTPRKQ15262 1439 aa13.7□□□□□ -0.22
FNDC3B-206ENST00000443501 MYO5CQ9NQX4 1742 aa13.7□□□□□ -0.22
FNDC3B-206ENST00000443501 ZNF142P52746 1687 aaPredicted RBP13.69□□□□□ -0.22
FNDC3B-206ENST00000443501 RGS17Q9UGC6 210 aaPredicted RBP13.69□□□□□ -0.22
FNDC3B-206ENST00000443501 CDK13Q14004 1512 aaKnown RBP13.68□□□□□ -0.22
FNDC3B-206ENST00000443501 CEP170BQ9Y4F5 1589 aaPredicted RBP13.67□□□□□ -0.22
FNDC3B-206ENST00000443501 APLP2Q06481 763 aa13.67□□□□□ -0.22
FNDC3B-206ENST00000443501 SHANK2Q9UPX8 1470 aa13.67□□□□□ -0.22
FNDC3B-206ENST00000443501 MYO3AQ8NEV4 1616 aa13.66□□□□□ -0.22
FNDC3B-206ENST00000443501 ALKQ9UM73 1620 aa13.66□□□□□ -0.22
FNDC3B-206ENST00000443501 ARHGAP5Q13017 1502 aa13.65□□□□□ -0.22
FNDC3B-206ENST00000443501 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
FNDC3B-206ENST00000443501 CDK11AQ9UQ88 783 aaPredicted RBP13.62□□□□□ -0.23
FNDC3B-206ENST00000443501 SUPT6HQ7KZ85 1726 aaKnown RBP13.61□□□□□ -0.23
FNDC3B-206ENST00000443501 RANGAP1P46060 587 aaPredicted RBP13.61□□□□□ -0.23
FNDC3B-206ENST00000443501 KIDINS220Q9ULH0 1771 aa13.6□□□□□ -0.23
FNDC3B-206ENST00000443501 KIF14Q15058 1648 aa13.6□□□□□ -0.23
FNDC3B-206ENST00000443501 A2ML1A8K2U0 1454 aa13.6□□□□□ -0.23
FNDC3B-206ENST00000443501 ABCC1P33527 1531 aa13.58□□□□□ -0.24
FNDC3B-206ENST00000443501 VWDEQ8N2E2 1590 aa13.58□□□□□ -0.24
FNDC3B-206ENST00000443501 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms