RNA–Protein interactions for RNA: ENST00000441892.6

CDH17-202, Transcript of cadherin 17, humanhuman

TSL 2 BASIC

Gene CDH17, Length 2,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-202ENST00000441892 PODXL2Q9NZ53 605 aa10.71□□□□□ -0.69
CDH17-202ENST00000441892 GSE1Q14687 1217 aa10.7□□□□□ -0.7
CDH17-202ENST00000441892 FAM43AQ8N2R8 423 aa10.7□□□□□ -0.7
CDH17-202ENST00000441892 PBRM1Q86U86 1689 aa10.7□□□□□ -0.7
CDH17-202ENST00000441892 GAPVD1Q14C86 1478 aa10.7□□□□□ -0.7
CDH17-202ENST00000441892 ZMYND15Q9H091 742 aa10.69□□□□□ -0.7
CDH17-202ENST00000441892 FBXO3Q9UK99 471 aa10.69□□□□□ -0.7
CDH17-202ENST00000441892 RAB3GAP2Q9H2M9 1393 aa10.69□□□□□ -0.7
CDH17-202ENST00000441892 CCNB3Q8WWL7 1395 aa10.68□□□□□ -0.7
CDH17-202ENST00000441892 SNAPC4Q5SXM2 1469 aa10.66□□□□□ -0.7
CDH17-202ENST00000441892 GRIN2BQ13224 1484 aa10.66□□□□□ -0.7
CDH17-202ENST00000441892 LAS1LQ9Y4W2 734 aaKnown RBP10.66□□□□□ -0.7
CDH17-202ENST00000441892 PLEKHG5O94827 1062 aa10.65□□□□□ -0.7
CDH17-202ENST00000441892 CHD1O14646 1710 aa10.65□□□□□ -0.7
CDH17-202ENST00000441892 ZBED9Q6R2W3 1325 aa10.65□□□□□ -0.7
CDH17-202ENST00000441892 PAXIP1Q6ZW49 1069 aaPredicted RBP10.65□□□□□ -0.71
CDH17-202ENST00000441892 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
CDH17-202ENST00000441892 PROM2Q8N271 834 aa10.63□□□□□ -0.71
CDH17-202ENST00000441892 HIRIP3Q9BW71 556 aaPredicted RBP10.63□□□□□ -0.71
CDH17-202ENST00000441892 IGF1RP08069 1367 aa10.63□□□□□ -0.71
CDH17-202ENST00000441892 KANK4Q5T7N3 995 aaPredicted RBP10.62□□□□□ -0.71
CDH17-202ENST00000441892 CFAP44Q96MT7 982 aa10.62□□□□□ -0.71
CDH17-202ENST00000441892 SIN3AQ96ST3 1273 aa10.62□□□□□ -0.71
CDH17-202ENST00000441892 SETD5Q9C0A6 1442 aa10.62□□□□□ -0.71
CDH17-202ENST00000441892 KIF27Q86VH2 1401 aa10.61□□□□□ -0.71
CDH17-202ENST00000441892 ERICH3Q5RHP9 1530 aa10.6□□□□□ -0.71
CDH17-202ENST00000441892 MKRN4PQ13434 485 aaPredicted RBP10.6□□□□□ -0.71
CDH17-202ENST00000441892 MAGI1Q96QZ7 1491 aaPredicted RBP10.6□□□□□ -0.71
CDH17-202ENST00000441892 RNF123Q5XPI4 1314 aa10.6□□□□□ -0.71
CDH17-202ENST00000441892 RAPGEF2Q9Y4G8 1499 aa10.6□□□□□ -0.71
CDH17-202ENST00000441892 ADAMTS12P58397 1594 aa10.6□□□□□ -0.71
CDH17-202ENST00000441892 FRAT1Q92837 279 aaPredicted RBP10.59□□□□□ -0.71
CDH17-202ENST00000441892 TCERG1O14776 1098 aaKnown RBP10.58□□□□□ -0.72
CDH17-202ENST00000441892 SYNJ2O15056 1496 aa10.58□□□□□ -0.72
CDH17-202ENST00000441892 ARAP1Q96P48 1450 aa10.58□□□□□ -0.72
CDH17-202ENST00000441892 RRP9O43818 475 aaKnown RBP10.57□□□□□ -0.72
CDH17-202ENST00000441892 CHMP7Q8WUX9 453 aaPredicted RBP10.57□□□□□ -0.72
CDH17-202ENST00000441892 DDRGK1Q96HY6 314 aa10.57□□□□□ -0.72
CDH17-202ENST00000441892 SMG6Q86US8 1419 aaKnown RBP10.57□□□□□ -0.72
CDH17-202ENST00000441892 NFKBIBQ15653 356 aa10.57□□□□□ -0.72
CDH17-202ENST00000441892 NPM2Q86SE8 214 aaKnown RBP10.57□□□□□ -0.72
CDH17-202ENST00000441892 OSCARQ8IYS5 282 aa10.57□□□□□ -0.72
CDH17-202ENST00000441892 FHAD1B1AJZ9 1412 aa10.56□□□□□ -0.72
CDH17-202ENST00000441892 DNAJC5Q9H3Z4 198 aa10.56□□□□□ -0.72
CDH17-202ENST00000441892 U3KPZ7 1027 aaPredicted RBP10.56□□□□□ -0.72
CDH17-202ENST00000441892 MS4A1P11836 297 aa10.54□□□□□ -0.72
CDH17-202ENST00000441892 PDE4AP27815 886 aa10.54□□□□□ -0.72
CDH17-202ENST00000441892 BBXQ8WY36 941 aaPredicted RBP10.54□□□□□ -0.72
CDH17-202ENST00000441892 GRIN2AQ12879 1464 aa10.54□□□□□ -0.72
CDH17-202ENST00000441892 HSP90AA2PQ14568 343 aaPredicted RBP10.54□□□□□ -0.72
CDH17-202ENST00000441892 BACH2Q9BYV9 841 aa10.54□□□□□ -0.72
CDH17-202ENST00000441892 CARMIL1Q5VZK9 1371 aa10.54□□□□□ -0.72
CDH17-202ENST00000441892 CEP170Q5SW79 1584 aa10.53□□□□□ -0.72
CDH17-202ENST00000441892 CUL7Q14999 1698 aa10.53□□□□□ -0.72
CDH17-202ENST00000441892 ZNF219Q9P2Y4 722 aaPredicted RBP10.52□□□□□ -0.73
CDH17-202ENST00000441892 AKNAQ7Z591 1439 aa10.52□□□□□ -0.73
CDH17-202ENST00000441892 NUDCQ9Y266 331 aa10.52□□□□□ -0.73
CDH17-202ENST00000441892 TONSLQ96HA7 1378 aa10.51□□□□□ -0.73
CDH17-202ENST00000441892 FAM9BQ8IZU0 186 aa10.51□□□□□ -0.73
CDH17-202ENST00000441892 NCOA2Q15596 1464 aa10.51□□□□□ -0.73
CDH17-202ENST00000441892 CCDC184Q52MB2 194 aa10.5□□□□□ -0.73
CDH17-202ENST00000441892 DCAF11Q8TEB1 546 aa10.5□□□□□ -0.73
CDH17-202ENST00000441892 CLASP1Q7Z460 1538 aa10.5□□□□□ -0.73
CDH17-202ENST00000441892 CNTLNQ9NXG0 1405 aa10.5□□□□□ -0.73
CDH17-202ENST00000441892 RANGAP1P46060 587 aaPredicted RBP10.5□□□□□ -0.73
CDH17-202ENST00000441892 MRS2Q9HD23 443 aa10.49□□□□□ -0.73
CDH17-202ENST00000441892 NUP160Q12769 1436 aa10.49□□□□□ -0.73
CDH17-202ENST00000441892 HSP90AA1P07900 732 aaKnown RBP10.49□□□□□ -0.73
CDH17-202ENST00000441892 PRKRIP1Q9H875 184 aaPredicted RBP10.49□□□□□ -0.73
CDH17-202ENST00000441892 PRXQ9BXM0 1461 aa10.48□□□□□ -0.73
CDH17-202ENST00000441892 RGL2O15211 777 aa10.47□□□□□ -0.73
CDH17-202ENST00000441892 RRAGDQ9NQL2 400 aaPredicted RBP10.47□□□□□ -0.73
CDH17-202ENST00000441892 SAMD1Q6SPF0 538 aaPredicted RBP10.46□□□□□ -0.73
CDH17-202ENST00000441892 ARXQ96QS3 562 aa10.46□□□□□ -0.73
CDH17-202ENST00000441892 ERCC6L2Q5T890 1561 aa10.45□□□□□ -0.74
CDH17-202ENST00000441892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDH17-202ENST00000441892 MAP3K1Q13233 1512 aa10.44□□□□□ -0.74
CDH17-202ENST00000441892 RIMBP3CA6NJZ7 1639 aa10.44□□□□□ -0.74
CDH17-202ENST00000441892 RIMBP3BA6NNM3 1639 aa10.44□□□□□ -0.74
CDH17-202ENST00000441892 RIMBP3Q9UFD9 1639 aa10.44□□□□□ -0.74
CDH17-202ENST00000441892 NAP1L5Q96NT1 182 aaPredicted RBP10.43□□□□□ -0.74
CDH17-202ENST00000441892 PNNQ9H307 717 aaKnown RBP10.43□□□□□ -0.74
CDH17-202ENST00000441892 ECM2O94769 699 aaPredicted RBP10.42□□□□□ -0.74
CDH17-202ENST00000441892 CLCN1P35523 988 aa10.42□□□□□ -0.74
CDH17-202ENST00000441892 L1TD1Q5T7N2 865 aaKnown RBP10.42□□□□□ -0.74
CDH17-202ENST00000441892 ARHGEF11O15085 1522 aa10.42□□□□□ -0.74
CDH17-202ENST00000441892 SHROOM2Q13796 1616 aa10.41□□□□□ -0.74
CDH17-202ENST00000441892 HSPA5P11021 654 aaKnown RBP10.41□□□□□ -0.74
CDH17-202ENST00000441892 CENPJQ9HC77 1338 aaPredicted RBP10.41□□□□□ -0.74
CDH17-202ENST00000441892 KIAA0586Q9BVV6 1533 aa10.41□□□□□ -0.74
CDH17-202ENST00000441892 FRAT2O75474 233 aaPredicted RBP10.4□□□□□ -0.74
CDH17-202ENST00000441892 RBM10P98175 930 aaKnown RBP10.4□□□□□ -0.74
CDH17-202ENST00000441892 JPH4Q96JJ6 628 aa10.4□□□□□ -0.74
CDH17-202ENST00000441892 AAMPQ13685 434 aa10.39□□□□□ -0.75
CDH17-202ENST00000441892 CTTNBP2Q8WZ74 1663 aa10.39□□□□□ -0.75
CDH17-202ENST00000441892 KDM5BQ9UGL1 1544 aa10.39□□□□□ -0.75
CDH17-202ENST00000441892 EIF4G2P78344 907 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDH17-202ENST00000441892 FGD1P98174 961 aa10.38□□□□□ -0.75
CDH17-202ENST00000441892 DCAF8L1A6NGE4 600 aa10.38□□□□□ -0.75
CDH17-202ENST00000441892 CALD1Q05682 793 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms