RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 ARHGEF12Q9NZN5 1544 aa16.9■□□□□ 0.3
SYN3-204ENST00000441821 PLCH2O75038 1416 aa16.89■□□□□ 0.29
SYN3-204ENST00000441821 ATP10AO60312 1499 aa16.88■□□□□ 0.29
SYN3-204ENST00000441821 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
SYN3-204ENST00000441821 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
SYN3-204ENST00000441821 C9orf84Q5VXU9 1444 aa16.87■□□□□ 0.29
SYN3-204ENST00000441821 EEA1Q15075 1411 aa16.86■□□□□ 0.29
SYN3-204ENST00000441821 DISP3Q9P2K9 1392 aa16.85■□□□□ 0.29
SYN3-204ENST00000441821 ILDR2Q71H61 639 aa16.84■□□□□ 0.29
SYN3-204ENST00000441821 CDK13Q14004 1512 aaKnown RBP16.84■□□□□ 0.29
SYN3-204ENST00000441821 SOCS7O14512 581 aa16.83■□□□□ 0.28
SYN3-204ENST00000441821 CEBPAP49715 358 aaPredicted RBP16.83■□□□□ 0.28
SYN3-204ENST00000441821 EFCAB2Q5VUJ9 269 aa16.83■□□□□ 0.28
SYN3-204ENST00000441821 STRCQ7RTU9 1775 aa16.83■□□□□ 0.28
SYN3-204ENST00000441821 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
SYN3-204ENST00000441821 ZNF518AQ6AHZ1 1483 aa16.79■□□□□ 0.28
SYN3-204ENST00000441821 MYO5CQ9NQX4 1742 aa16.79■□□□□ 0.28
SYN3-204ENST00000441821 SETD1BQ9UPS6 1966 aaKnown RBP16.77■□□□□ 0.27
SYN3-204ENST00000441821 CDK11AQ9UQ88 783 aaPredicted RBP16.76■□□□□ 0.27
SYN3-204ENST00000441821 PTPRTO14522 1441 aa16.76■□□□□ 0.27
SYN3-204ENST00000441821 KDM5CP41229 1560 aa16.76■□□□□ 0.27
SYN3-204ENST00000441821 AFAP1Q8N556 730 aa16.75■□□□□ 0.27
SYN3-204ENST00000441821 REREQ9P2R6 1566 aa16.74■□□□□ 0.27
SYN3-204ENST00000441821 FMN1Q68DA7 1419 aa16.73■□□□□ 0.27
SYN3-204ENST00000441821 ATP1B4Q9UN42 357 aaPredicted RBP16.73■□□□□ 0.27
SYN3-204ENST00000441821 KIF14Q15058 1648 aa16.72■□□□□ 0.27
SYN3-204ENST00000441821 DIP2CQ9Y2E4 1556 aa16.72■□□□□ 0.27
SYN3-204ENST00000441821 ARHGAP5Q13017 1502 aa16.71■□□□□ 0.27
SYN3-204ENST00000441821 MYT1LQ9UL68 1186 aa16.71■□□□□ 0.27
SYN3-204ENST00000441821 SPATA31D1Q6ZQQ2 1576 aa16.71■□□□□ 0.27
SYN3-204ENST00000441821 TROQ12816 1431 aaPredicted RBP16.7■□□□□ 0.26
SYN3-204ENST00000441821 C3P01024 1663 aa16.7■□□□□ 0.26
SYN3-204ENST00000441821 MLH3Q9UHC1 1453 aa16.7■□□□□ 0.26
SYN3-204ENST00000441821 IQSEC2Q5JU85 1478 aa16.69■□□□□ 0.26
SYN3-204ENST00000441821 LTBP4Q8N2S1 1624 aa16.69■□□□□ 0.26
SYN3-204ENST00000441821 AGLP35573 1532 aa16.69■□□□□ 0.26
SYN3-204ENST00000441821 TRAPPC8Q9Y2L5 1435 aa16.69■□□□□ 0.26
SYN3-204ENST00000441821 ESF1Q9H501 851 aaKnown RBP16.68■□□□□ 0.26
SYN3-204ENST00000441821 CLIP1P30622 1438 aa16.67■□□□□ 0.26
SYN3-204ENST00000441821 ABCA6Q8N139 1617 aa16.67■□□□□ 0.26
SYN3-204ENST00000441821 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
SYN3-204ENST00000441821 ARHGAP35Q9NRY4 1499 aa16.65■□□□□ 0.26
SYN3-204ENST00000441821 CDC42BPBQ9Y5S2 1711 aa16.64■□□□□ 0.25
SYN3-204ENST00000441821 CNTLNQ9NXG0 1405 aa16.63■□□□□ 0.25
SYN3-204ENST00000441821 UBTFP17480 764 aaKnown RBP16.63■□□□□ 0.25
SYN3-204ENST00000441821 ABCC1P33527 1531 aa16.61■□□□□ 0.25
SYN3-204ENST00000441821 NPATQ14207 1427 aa16.6■□□□□ 0.25
SYN3-204ENST00000441821 PREX2Q70Z35 1606 aa16.59■□□□□ 0.25
SYN3-204ENST00000441821 CAMSAP1Q5T5Y3 1602 aa16.59■□□□□ 0.25
SYN3-204ENST00000441821 ITSN2Q9NZM3 1697 aa16.59■□□□□ 0.25
SYN3-204ENST00000441821 LRRIQ1Q96JM4 1722 aa16.59■□□□□ 0.25
SYN3-204ENST00000441821 KIDINS220Q9ULH0 1771 aa16.59■□□□□ 0.25
SYN3-204ENST00000441821 MROH2AA6NES4 1674 aa16.56■□□□□ 0.24
SYN3-204ENST00000441821 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
SYN3-204ENST00000441821 ZMYM3Q14202 1370 aa16.55■□□□□ 0.24
SYN3-204ENST00000441821 NCKAP5LQ9HCH0 1330 aa16.54■□□□□ 0.24
SYN3-204ENST00000441821 UBAP1LF5GYI3 381 aa16.53■□□□□ 0.24
SYN3-204ENST00000441821 CCDC18Q5T9S5 1454 aa16.53■□□□□ 0.24
SYN3-204ENST00000441821 ZNF335Q9H4Z2 1342 aaPredicted RBP16.52■□□□□ 0.24
SYN3-204ENST00000441821 PKD2Q13563 968 aa16.52■□□□□ 0.24
SYN3-204ENST00000441821 SAMD9LQ8IVG5 1584 aa16.51■□□□□ 0.23
SYN3-204ENST00000441821 CDC42BPAQ5VT25 1732 aa16.51■□□□□ 0.23
SYN3-204ENST00000441821 PLA2R1Q13018 1463 aa16.51■□□□□ 0.23
SYN3-204ENST00000441821 CASKIN1Q8WXD9 1431 aa16.51■□□□□ 0.23
SYN3-204ENST00000441821 SPAG9O60271 1321 aaKnown RBP16.49■□□□□ 0.23
SYN3-204ENST00000441821 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
SYN3-204ENST00000441821 ZNF142P52746 1687 aaPredicted RBP16.48■□□□□ 0.23
SYN3-204ENST00000441821 ZNF777Q9ULD5 760 aaPredicted RBP16.47■□□□□ 0.23
SYN3-204ENST00000441821 MYO3AQ8NEV4 1616 aa16.47■□□□□ 0.23
SYN3-204ENST00000441821 SUPT6HQ7KZ85 1726 aaKnown RBP16.47■□□□□ 0.23
SYN3-204ENST00000441821 CLTCQ00610 1675 aaKnown RBP16.46■□□□□ 0.23
SYN3-204ENST00000441821 PTPRKQ15262 1439 aa16.46■□□□□ 0.23
SYN3-204ENST00000441821 CEP170BQ9Y4F5 1589 aaPredicted RBP16.46■□□□□ 0.23
SYN3-204ENST00000441821 SYCP2Q9BX26 1530 aa16.45■□□□□ 0.22
SYN3-204ENST00000441821 HNRNPMP52272 730 aaKnown RBP eCLIP16.45■□□□□ 0.229e-6■■■■□ 22.2
SYN3-204ENST00000441821 PLXNC1O60486 1568 aa16.45■□□□□ 0.22
SYN3-204ENST00000441821 GPATCH8Q9UKJ3 1502 aaKnown RBP16.45■□□□□ 0.22
SYN3-204ENST00000441821 PPP6R1Q9UPN7 881 aa16.44■□□□□ 0.22
SYN3-204ENST00000441821 ATP7AQ04656 1500 aa16.44■□□□□ 0.22
SYN3-204ENST00000441821 KIAA1107Q9UPP5 1409 aa16.44■□□□□ 0.22
SYN3-204ENST00000441821 A2MP01023 1474 aa16.43■□□□□ 0.22
SYN3-204ENST00000441821 INO80Q9ULG1 1556 aaPredicted RBP16.42■□□□□ 0.22
SYN3-204ENST00000441821 PLEKHH2Q8IVE3 1493 aa16.42■□□□□ 0.22
SYN3-204ENST00000441821 GGT6Q6P531 493 aa16.41■□□□□ 0.22
SYN3-204ENST00000441821 FYCO1Q9BQS8 1478 aa16.41■□□□□ 0.22
SYN3-204ENST00000441821 CFDP1Q9UEE9 299 aaPredicted RBP16.39■□□□□ 0.21
SYN3-204ENST00000441821 A2ML1A8K2U0 1454 aa16.38■□□□□ 0.21
SYN3-204ENST00000441821 TOM1O60784 492 aa16.37■□□□□ 0.21
SYN3-204ENST00000441821 HSPA1LP34931 641 aa16.37■□□□□ 0.21
SYN3-204ENST00000441821 DNMT1P26358 1616 aaKnown RBP16.37■□□□□ 0.21
SYN3-204ENST00000441821 MED1Q15648 1581 aaPredicted RBP16.36■□□□□ 0.21
SYN3-204ENST00000441821 ADGBQ8N7X0 1667 aa16.36■□□□□ 0.21
SYN3-204ENST00000441821 CPS1P31327 1500 aa16.35■□□□□ 0.21
SYN3-204ENST00000441821 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
SYN3-204ENST00000441821 CCNB3Q8WWL7 1395 aa16.35■□□□□ 0.21
SYN3-204ENST00000441821 PIP4K2BP78356 416 aa16.34■□□□□ 0.21
SYN3-204ENST00000441821 SHANK2Q9UPX8 1470 aa16.33■□□□□ 0.2
SYN3-204ENST00000441821 POLR1AO95602 1720 aaPredicted RBP16.31■□□□□ 0.2
SYN3-204ENST00000441821 NEURL4Q96JN8 1562 aa16.31■□□□□ 0.2
SYN3-204ENST00000441821 RTEL1-TNFRSF6BF6WH68 1400 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms