RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 CCDC184Q52MB2 194 aa18.32■□□□□ 0.52
LINC02048-201ENST00000440556 AKNAQ7Z591 1439 aa18.32■□□□□ 0.52
LINC02048-201ENST00000440556 PKNOX2Q96KN3 472 aa18.31■□□□□ 0.52
LINC02048-201ENST00000440556 LAS1LQ9Y4W2 734 aaKnown RBP18.31■□□□□ 0.52
LINC02048-201ENST00000440556 PDE4AP27815 886 aa18.3■□□□□ 0.52
LINC02048-201ENST00000440556 BACH2Q9BYV9 841 aa18.3■□□□□ 0.52
LINC02048-201ENST00000440556 IGF1RP08069 1367 aa18.3■□□□□ 0.52
LINC02048-201ENST00000440556 BRPF3Q9ULD4 1205 aa18.3■□□□□ 0.52
LINC02048-201ENST00000440556 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.52
LINC02048-201ENST00000440556 FYCO1Q9BQS8 1478 aa18.27■□□□□ 0.52
LINC02048-201ENST00000440556 CARMIL1Q5VZK9 1371 aa18.27■□□□□ 0.52
LINC02048-201ENST00000440556 PCF11O94913 1555 aaKnown RBP18.26■□□□□ 0.51
LINC02048-201ENST00000440556 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
LINC02048-201ENST00000440556 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
LINC02048-201ENST00000440556 FMN1Q68DA7 1419 aa18.25■□□□□ 0.51
LINC02048-201ENST00000440556 FGD6Q6ZV73 1430 aa18.25■□□□□ 0.51
LINC02048-201ENST00000440556 NPM2Q86SE8 214 aaKnown RBP18.25■□□□□ 0.51
LINC02048-201ENST00000440556 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
LINC02048-201ENST00000440556 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
LINC02048-201ENST00000440556 CTTNBP2Q8WZ74 1663 aa18.22■□□□□ 0.51
LINC02048-201ENST00000440556 TARBP1Q13395 1621 aaKnown RBP18.22■□□□□ 0.51
LINC02048-201ENST00000440556 NFKBIBQ15653 356 aa18.21■□□□□ 0.51
LINC02048-201ENST00000440556 NAIPQ13075 1403 aa18.21■□□□□ 0.51
LINC02048-201ENST00000440556 CASKIN1Q8WXD9 1431 aa18.19■□□□□ 0.5
LINC02048-201ENST00000440556 FRAT1Q92837 279 aaPredicted RBP18.19■□□□□ 0.5
LINC02048-201ENST00000440556 DNAJC5Q9H3Z4 198 aa18.19■□□□□ 0.5
LINC02048-201ENST00000440556 IFT140Q96RY7 1462 aa18.17■□□□□ 0.5
LINC02048-201ENST00000440556 GCC2Q8IWJ2 1684 aa18.16■□□□□ 0.5
LINC02048-201ENST00000440556 DAXXQ9UER7 740 aaPredicted RBP18.16■□□□□ 0.5
LINC02048-201ENST00000440556 RRP1P56182 461 aaKnown RBP18.14■□□□□ 0.5
LINC02048-201ENST00000440556 ARID4BQ4LE39 1312 aaPredicted RBP18.12■□□□□ 0.49
LINC02048-201ENST00000440556 SPATA31E1Q6ZUB1 1445 aa18.11■□□□□ 0.49
LINC02048-201ENST00000440556 MIA2Q96PC5 1412 aa18.1■□□□□ 0.49
LINC02048-201ENST00000440556 KIF7Q2M1P5 1343 aa18.1■□□□□ 0.49
LINC02048-201ENST00000440556 GAPVD1Q14C86 1478 aa18.09■□□□□ 0.49
LINC02048-201ENST00000440556 PTPRKQ15262 1439 aa18.09■□□□□ 0.49
LINC02048-201ENST00000440556 PDE3BQ13370 1112 aa18.09■□□□□ 0.49
LINC02048-201ENST00000440556 DHX29Q7Z478 1369 aaKnown RBP18.08■□□□□ 0.48
LINC02048-201ENST00000440556 KTN1Q86UP2 1357 aaKnown RBP18.08■□□□□ 0.48
LINC02048-201ENST00000440556 EXOC6Q8TAG9 804 aa18.06■□□□□ 0.48
LINC02048-201ENST00000440556 PNISRQ8TF01 805 aaKnown RBP18.06■□□□□ 0.48
LINC02048-201ENST00000440556 MYOM3Q5VTT5 1437 aa18.05■□□□□ 0.48
LINC02048-201ENST00000440556 L1TD1Q5T7N2 865 aaKnown RBP18.04■□□□□ 0.48
LINC02048-201ENST00000440556 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
LINC02048-201ENST00000440556 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
LINC02048-201ENST00000440556 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
LINC02048-201ENST00000440556 RCAN3Q9UKA8 241 aa18.04■□□□□ 0.48
LINC02048-201ENST00000440556 SUPT6HQ7KZ85 1726 aaKnown RBP18.04■□□□□ 0.48
LINC02048-201ENST00000440556 SAMD9Q5K651 1589 aa18.03■□□□□ 0.48
LINC02048-201ENST00000440556 RRP9O43818 475 aaKnown RBP18.02■□□□□ 0.48
LINC02048-201ENST00000440556 L3MBTL2Q969R5 705 aa18.02■□□□□ 0.48
LINC02048-201ENST00000440556 DENND4BO75064 1496 aaPredicted RBP18.01■□□□□ 0.47
LINC02048-201ENST00000440556 RPRD2Q5VT52 1461 aaKnown RBP18.01■□□□□ 0.47
LINC02048-201ENST00000440556 BRD4O60885 1362 aaPredicted RBP18■□□□□ 0.47
LINC02048-201ENST00000440556 TMC1Q8TDI8 760 aa17.99■□□□□ 0.47
LINC02048-201ENST00000440556 MTUS2Q5JR59 1369 aa17.98■□□□□ 0.47
LINC02048-201ENST00000440556 GRIN2BQ13224 1484 aa17.98■□□□□ 0.47
LINC02048-201ENST00000440556 TCOF1Q13428 1488 aaKnown RBP17.98■□□□□ 0.47
LINC02048-201ENST00000440556 ZMYND15Q9H091 742 aa17.97■□□□□ 0.47
LINC02048-201ENST00000440556 TEX14Q8IWB6 1497 aa17.96■□□□□ 0.47
LINC02048-201ENST00000440556 EHBP1L1Q8N3D4 1523 aa17.96■□□□□ 0.47
LINC02048-201ENST00000440556 ATP1B4Q9UN42 357 aaPredicted RBP17.96■□□□□ 0.47
LINC02048-201ENST00000440556 SNAPC4Q5SXM2 1469 aa17.96■□□□□ 0.47
LINC02048-201ENST00000440556 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
LINC02048-201ENST00000440556 INSRP06213 1382 aa17.95■□□□□ 0.46
LINC02048-201ENST00000440556 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
LINC02048-201ENST00000440556 FHOD3Q2V2M9 1422 aa17.94■□□□□ 0.46
LINC02048-201ENST00000440556 VSIG10Q8N0Z9 540 aa17.94■□□□□ 0.46
LINC02048-201ENST00000440556 MPHOSPH9Q99550 1183 aa17.94■□□□□ 0.46
LINC02048-201ENST00000440556 HSP90AA2PQ14568 343 aaPredicted RBP17.94■□□□□ 0.46
LINC02048-201ENST00000440556 FAM161AQ3B820 660 aa17.94■□□□□ 0.46
LINC02048-201ENST00000440556 ZMYM4Q5VZL5 1548 aa17.93■□□□□ 0.46
LINC02048-201ENST00000440556 KIF15Q9NS87 1388 aa17.92■□□□□ 0.46
LINC02048-201ENST00000440556 FRAT2O75474 233 aaPredicted RBP17.92■□□□□ 0.46
LINC02048-201ENST00000440556 HSP90AA1P07900 732 aaKnown RBP17.92■□□□□ 0.46
LINC02048-201ENST00000440556 RALBP1Q15311 655 aa17.92■□□□□ 0.46
LINC02048-201ENST00000440556 ANKRD30BQ9BXX2 1392 aa17.91■□□□□ 0.46
LINC02048-201ENST00000440556 ARHGEF11O15085 1522 aa17.91■□□□□ 0.46
LINC02048-201ENST00000440556 UGGT2Q9NYU1 1516 aa17.91■□□□□ 0.46
LINC02048-201ENST00000440556 NBPF8Q3BBV2 869 aa17.91■□□□□ 0.46
LINC02048-201ENST00000440556 FBLN2P98095 1184 aa17.9■□□□□ 0.46
LINC02048-201ENST00000440556 MYBBP1AQ9BQG0 1328 aaKnown RBP17.9■□□□□ 0.46
LINC02048-201ENST00000440556 CENPQQ7L2Z9 268 aaPredicted RBP17.89■□□□□ 0.45
LINC02048-201ENST00000440556 CLCN1P35523 988 aa17.89■□□□□ 0.45
LINC02048-201ENST00000440556 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
LINC02048-201ENST00000440556 RRAGDQ9NQL2 400 aaPredicted RBP17.88■□□□□ 0.45
LINC02048-201ENST00000440556 BCORL1Q5H9F3 1711 aa17.88■□□□□ 0.45
LINC02048-201ENST00000440556 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
LINC02048-201ENST00000440556 VIRMAQ69YN4 1812 aaKnown RBP17.87■□□□□ 0.45
LINC02048-201ENST00000440556 PLEKHH2Q8IVE3 1493 aa17.86■□□□□ 0.45
LINC02048-201ENST00000440556 KIF14Q15058 1648 aa17.86■□□□□ 0.45
LINC02048-201ENST00000440556 KDM2BQ8NHM5 1336 aa17.85■□□□□ 0.45
LINC02048-201ENST00000440556 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
LINC02048-201ENST00000440556 KDM5CP41229 1560 aa17.85■□□□□ 0.45
LINC02048-201ENST00000440556 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
LINC02048-201ENST00000440556 SLC4A3P48751 1232 aa17.84■□□□□ 0.45
LINC02048-201ENST00000440556 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
LINC02048-201ENST00000440556 NAP1L5Q96NT1 182 aaPredicted RBP17.84■□□□□ 0.45
LINC02048-201ENST00000440556 MAGI1Q96QZ7 1491 aaPredicted RBP17.83■□□□□ 0.45
LINC02048-201ENST00000440556 KDM6BO15054 1643 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms