RNA–Protein interactions for RNA: ENST00000440213.1

LINC01449-201, Transcript of long intergenic non-protein coding RNA 1449, humanhuman

TSL 1 (best) BASIC

Gene LINC01449, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01449-201ENST00000440213 HMGXB3Q12766 1538 aa11.35□□□□□ -0.59
LINC01449-201ENST00000440213 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
LINC01449-201ENST00000440213 NCAPD3P42695 1498 aa11.34□□□□□ -0.59
LINC01449-201ENST00000440213 P3H3Q8IVL6 736 aa11.34□□□□□ -0.59
LINC01449-201ENST00000440213 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
LINC01449-201ENST00000440213 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
LINC01449-201ENST00000440213 NCKAP5LQ9HCH0 1330 aa11.32□□□□□ -0.6
LINC01449-201ENST00000440213 BAZ1BQ9UIG0 1483 aaKnown RBP11.32□□□□□ -0.6
LINC01449-201ENST00000440213 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
LINC01449-201ENST00000440213 DPY19L2Q6NUT2 758 aa11.3□□□□□ -0.6
LINC01449-201ENST00000440213 PDCD7Q8N8D1 485 aaKnown RBP11.3□□□□□ -0.6
LINC01449-201ENST00000440213 DCBLD2Q96PD2 775 aa11.29□□□□□ -0.6
LINC01449-201ENST00000440213 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
LINC01449-201ENST00000440213 IER5LQ5T953 404 aa11.28□□□□□ -0.6
LINC01449-201ENST00000440213 SUPT5HO00267 1087 aaKnown RBP11.26□□□□□ -0.61
LINC01449-201ENST00000440213 PLCG2P16885 1265 aa11.26□□□□□ -0.61
LINC01449-201ENST00000440213 LARP6Q9BRS8 491 aaKnown RBP11.26□□□□□ -0.61
LINC01449-201ENST00000440213 CRISPLD2Q9H0B8 497 aa11.26□□□□□ -0.61
LINC01449-201ENST00000440213 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
LINC01449-201ENST00000440213 OCEL1Q9H607 264 aa11.24□□□□□ -0.61
LINC01449-201ENST00000440213 PDE4AP27815 886 aa11.23□□□□□ -0.61
LINC01449-201ENST00000440213 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
LINC01449-201ENST00000440213 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
LINC01449-201ENST00000440213 PRKCSHP14314 528 aaPredicted RBP11.22□□□□□ -0.61
LINC01449-201ENST00000440213 MFSD10Q14728 455 aa11.22□□□□□ -0.61
LINC01449-201ENST00000440213 E2F4Q16254 413 aa11.22□□□□□ -0.61
LINC01449-201ENST00000440213 TPRNQ4KMQ1 711 aa11.21□□□□□ -0.61
LINC01449-201ENST00000440213 G3V3G9 751 aa11.2□□□□□ -0.62
LINC01449-201ENST00000440213 SEC24BO95487 1268 aa11.2□□□□□ -0.62
LINC01449-201ENST00000440213 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
LINC01449-201ENST00000440213 SLC39A7Q92504 469 aa11.17□□□□□ -0.62
LINC01449-201ENST00000440213 COLQQ9Y215 455 aaPredicted RBP11.17□□□□□ -0.62
LINC01449-201ENST00000440213 PPP1R15BQ5SWA1 713 aa11.16□□□□□ -0.62
LINC01449-201ENST00000440213 METRNQ9UJH8 293 aa11.16□□□□□ -0.62
LINC01449-201ENST00000440213 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
LINC01449-201ENST00000440213 TMC2Q8TDI7 906 aa11.14□□□□□ -0.63
LINC01449-201ENST00000440213 ARHGEF1Q92888 912 aaKnown RBP11.14□□□□□ -0.63
LINC01449-201ENST00000440213 GPHNQ9NQX3 736 aaPredicted RBP11.14□□□□□ -0.63
LINC01449-201ENST00000440213 TMEM121BQ9BXQ6 578 aaPredicted RBP11.13□□□□□ -0.63
LINC01449-201ENST00000440213 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
LINC01449-201ENST00000440213 CCDC88BA6NC98 1476 aa11.12□□□□□ -0.63
LINC01449-201ENST00000440213 POTEFA5A3E0 1075 aa11.11□□□□□ -0.63
LINC01449-201ENST00000440213 C7P10643 843 aa11.11□□□□□ -0.63
LINC01449-201ENST00000440213 DSG2Q14126 1118 aa11.11□□□□□ -0.63
LINC01449-201ENST00000440213 CAMK2BQ13554 666 aa11.09□□□□□ -0.63
LINC01449-201ENST00000440213 C2orf72A6NCS6 295 aa11.08□□□□□ -0.64
LINC01449-201ENST00000440213 SEMA3EO15041 775 aa11.05□□□□□ -0.64
LINC01449-201ENST00000440213 FOXK1P85037 733 aa11.05□□□□□ -0.64
LINC01449-201ENST00000440213 PRDM2Q13029 1718 aa11.05□□□□□ -0.64
LINC01449-201ENST00000440213 LAMC3Q9Y6N6 1575 aa11.04□□□□□ -0.64
LINC01449-201ENST00000440213 KIF3CO14782 793 aa11.04□□□□□ -0.64
LINC01449-201ENST00000440213 TMEM92Q6UXU6 159 aa11.04□□□□□ -0.64
LINC01449-201ENST00000440213 C3orf67Q6ZVT6 689 aa11.04□□□□□ -0.64
LINC01449-201ENST00000440213 PLPP6Q8IY26 295 aa11.03□□□□□ -0.64
LINC01449-201ENST00000440213 EMILIN3Q9NT22 766 aa11.03□□□□□ -0.64
LINC01449-201ENST00000440213 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
LINC01449-201ENST00000440213 CFTRP13569 1480 aa11.01□□□□□ -0.65
LINC01449-201ENST00000440213 TULP1O00294 542 aaPredicted RBP11.01□□□□□ -0.65
LINC01449-201ENST00000440213 DPYSL4O14531 572 aa11.01□□□□□ -0.65
LINC01449-201ENST00000440213 ARIH1Q9Y4X5 557 aaPredicted RBP11.01□□□□□ -0.65
LINC01449-201ENST00000440213 CADPSQ9ULU8 1353 aa11.01□□□□□ -0.65
LINC01449-201ENST00000440213 TESPA1A2RU30 521 aaPredicted RBP10.99□□□□□ -0.65
LINC01449-201ENST00000440213 NESP48681 1621 aa10.98□□□□□ -0.65
LINC01449-201ENST00000440213 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.97□□□□□ -0.65
LINC01449-201ENST00000440213 UPF1Q92900 1129 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC01449-201ENST00000440213 PDIA6Q15084 440 aa10.94□□□□□ -0.66
LINC01449-201ENST00000440213 PDS5BQ9NTI5 1447 aa10.92□□□□□ -0.66
LINC01449-201ENST00000440213 MLLT3P42568 568 aaPredicted RBP10.92□□□□□ -0.66
LINC01449-201ENST00000440213 KIF21AQ7Z4S6 1674 aa10.92□□□□□ -0.66
LINC01449-201ENST00000440213 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.91□□□□□ -0.66
LINC01449-201ENST00000440213 FANCD2Q9BXW9 1451 aa10.9□□□□□ -0.66
LINC01449-201ENST00000440213 SMYD5Q6GMV2 418 aa10.9□□□□□ -0.66
LINC01449-201ENST00000440213 SPDYE16A6NNV3 312 aaPredicted RBP10.89□□□□□ -0.67
LINC01449-201ENST00000440213 MAP3K9P80192 1104 aa10.89□□□□□ -0.67
LINC01449-201ENST00000440213 CEP164Q9UPV0 1460 aa10.88□□□□□ -0.67
LINC01449-201ENST00000440213 ERCC6Q03468 1493 aa10.87□□□□□ -0.67
LINC01449-201ENST00000440213 OXER1Q8TDS5 423 aa10.86□□□□□ -0.67
LINC01449-201ENST00000440213 RBM26Q5T8P6 1007 aaKnown RBP10.83□□□□□ -0.68
LINC01449-201ENST00000440213 ZC3H15Q8WU90 426 aaKnown RBP10.83□□□□□ -0.68
LINC01449-201ENST00000440213 THOC2Q8NI27 1593 aaKnown RBP10.82□□□□□ -0.68
LINC01449-201ENST00000440213 MRC2Q9UBG0 1479 aa10.81□□□□□ -0.68
LINC01449-201ENST00000440213 GRXCR2A6NFK2 248 aa10.81□□□□□ -0.68
LINC01449-201ENST00000440213 POTEJP0CG39 1038 aa10.81□□□□□ -0.68
LINC01449-201ENST00000440213 GPIHBP1Q8IV16 184 aa10.81□□□□□ -0.68
LINC01449-201ENST00000440213 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
LINC01449-201ENST00000440213 POTEB2H3BUK9 544 aa10.8□□□□□ -0.68
LINC01449-201ENST00000440213 ABCC8Q09428 1581 aa10.8□□□□□ -0.68
LINC01449-201ENST00000440213 DNMBPQ6XZF7 1577 aa10.79□□□□□ -0.68
LINC01449-201ENST00000440213 EVI5O60447 810 aa10.79□□□□□ -0.68
LINC01449-201ENST00000440213 WDR62O43379 1518 aa10.79□□□□□ -0.68
LINC01449-201ENST00000440213 WRNQ14191 1432 aaPredicted RBP eCLIP10.78□□□□□ -0.68
LINC01449-201ENST00000440213 TBC1D12O60347 775 aa10.78□□□□□ -0.68
LINC01449-201ENST00000440213 PTCD2Q8WV60 388 aaKnown RBP10.78□□□□□ -0.68
LINC01449-201ENST00000440213 DDX12PQ92771 950 aa10.78□□□□□ -0.68
LINC01449-201ENST00000440213 BIVM-ERCC5R4GMW8 1640 aa10.77□□□□□ -0.68
LINC01449-201ENST00000440213 URB2Q14146 1524 aaKnown RBP10.77□□□□□ -0.69
LINC01449-201ENST00000440213 CUX1P39880 1505 aa10.76□□□□□ -0.69
LINC01449-201ENST00000440213 TOPBP1Q92547 1522 aa10.76□□□□□ -0.69
LINC01449-201ENST00000440213 SLC34A2O95436 690 aa10.76□□□□□ -0.69
LINC01449-201ENST00000440213 SCUBE2Q9NQ36 999 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms