RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 PTPRTO14522 1441 aa16.12■□□□□ 0.17
RPE-210ENST00000438204 MED1Q15648 1581 aaPredicted RBP16.12■□□□□ 0.17
RPE-210ENST00000438204 P3H3Q8IVL6 736 aa16.11■□□□□ 0.17
RPE-210ENST00000438204 SETD1BQ9UPS6 1966 aaKnown RBP16.1■□□□□ 0.17
RPE-210ENST00000438204 MAGI2Q86UL8 1455 aa16.09■□□□□ 0.17
RPE-210ENST00000438204 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.09■□□□□ 0.17
RPE-210ENST00000438204 C3P01024 1663 aa16.08■□□□□ 0.16
RPE-210ENST00000438204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
RPE-210ENST00000438204 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
RPE-210ENST00000438204 NUP153P49790 1475 aaKnown RBP16.07■□□□□ 0.16
RPE-210ENST00000438204 C9orf84Q5VXU9 1444 aa16.06■□□□□ 0.16
RPE-210ENST00000438204 SAMD9Q5K651 1589 aa16.05■□□□□ 0.16
RPE-210ENST00000438204 ATP10AO60312 1499 aa16.03■□□□□ 0.16
RPE-210ENST00000438204 NCOA1Q15788 1441 aa16.02■□□□□ 0.16
RPE-210ENST00000438204 SENP3Q9H4L4 574 aaPredicted RBP16.02■□□□□ 0.16
RPE-210ENST00000438204 UBAP1LF5GYI3 381 aa16.01■□□□□ 0.15
RPE-210ENST00000438204 SCAPERQ9BY12 1400 aa15.99■□□□□ 0.15
RPE-210ENST00000438204 PRXQ9BXM0 1461 aa15.98■□□□□ 0.15
RPE-210ENST00000438204 CAMSAP1Q5T5Y3 1602 aa15.97■□□□□ 0.15
RPE-210ENST00000438204 ZNF335Q9H4Z2 1342 aaPredicted RBP15.97■□□□□ 0.15
RPE-210ENST00000438204 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
RPE-210ENST00000438204 DIP2CQ9Y2E4 1556 aa15.95■□□□□ 0.14
RPE-210ENST00000438204 ABCA6Q8N139 1617 aa15.94■□□□□ 0.14
RPE-210ENST00000438204 MYO5CQ9NQX4 1742 aa15.92■□□□□ 0.14
RPE-210ENST00000438204 HSPA1LP34931 641 aa15.92■□□□□ 0.14
RPE-210ENST00000438204 PLEKHD1A6NEE1 506 aa15.91■□□□□ 0.14
RPE-210ENST00000438204 SUPT6HQ7KZ85 1726 aaKnown RBP15.91■□□□□ 0.14
RPE-210ENST00000438204 CDK13Q14004 1512 aaKnown RBP15.9■□□□□ 0.14
RPE-210ENST00000438204 TRAPPC8Q9Y2L5 1435 aa15.9■□□□□ 0.14
RPE-210ENST00000438204 KDM5CP41229 1560 aa15.9■□□□□ 0.14
RPE-210ENST00000438204 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
RPE-210ENST00000438204 REREQ9P2R6 1566 aa15.88■□□□□ 0.13
RPE-210ENST00000438204 PLCH2O75038 1416 aa15.88■□□□□ 0.13
RPE-210ENST00000438204 NCKAP5LQ9HCH0 1330 aa15.88■□□□□ 0.13
RPE-210ENST00000438204 ZNF518AQ6AHZ1 1483 aa15.86■□□□□ 0.13
RPE-210ENST00000438204 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
RPE-210ENST00000438204 ZNF142P52746 1687 aaPredicted RBP15.86■□□□□ 0.13
RPE-210ENST00000438204 PIP4K2BP78356 416 aa15.85■□□□□ 0.13
RPE-210ENST00000438204 MYO3AQ8NEV4 1616 aa15.85■□□□□ 0.13
RPE-210ENST00000438204 KIF14Q15058 1648 aa15.83■□□□□ 0.13
RPE-210ENST00000438204 RANGAP1P46060 587 aaPredicted RBP15.83■□□□□ 0.12
RPE-210ENST00000438204 AGLP35573 1532 aa15.83■□□□□ 0.12
RPE-210ENST00000438204 MROH2AA6NES4 1674 aa15.83■□□□□ 0.12
RPE-210ENST00000438204 AFAP1Q8N556 730 aa15.8■□□□□ 0.12
RPE-210ENST00000438204 MYT1LQ9UL68 1186 aa15.8■□□□□ 0.12
RPE-210ENST00000438204 CEP170BQ9Y4F5 1589 aaPredicted RBP15.79■□□□□ 0.12
RPE-210ENST00000438204 PLA2R1Q13018 1463 aa15.79■□□□□ 0.12
RPE-210ENST00000438204 TCOF1Q13428 1488 aaKnown RBP15.79■□□□□ 0.12
RPE-210ENST00000438204 ESF1Q9H501 851 aaKnown RBP15.79■□□□□ 0.12
RPE-210ENST00000438204 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
RPE-210ENST00000438204 ALKQ9UM73 1620 aa15.78■□□□□ 0.12
RPE-210ENST00000438204 NPATQ14207 1427 aa15.77■□□□□ 0.12
RPE-210ENST00000438204 CNTLNQ9NXG0 1405 aa15.77■□□□□ 0.12
RPE-210ENST00000438204 EFCAB2Q5VUJ9 269 aa15.76■□□□□ 0.11
RPE-210ENST00000438204 KIDINS220Q9ULH0 1771 aa15.76■□□□□ 0.11
RPE-210ENST00000438204 CLTCQ00610 1675 aaKnown RBP15.76■□□□□ 0.11
RPE-210ENST00000438204 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
RPE-210ENST00000438204 POLR1AO95602 1720 aaPredicted RBP15.74■□□□□ 0.11
RPE-210ENST00000438204 CDC42BPBQ9Y5S2 1711 aa15.74■□□□□ 0.11
RPE-210ENST00000438204 MLH3Q9UHC1 1453 aa15.74■□□□□ 0.11
RPE-210ENST00000438204 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
RPE-210ENST00000438204 CPS1P31327 1500 aa15.72■□□□□ 0.11
RPE-210ENST00000438204 ABCC1P33527 1531 aa15.72■□□□□ 0.11
RPE-210ENST00000438204 NEURL4Q96JN8 1562 aa15.71■□□□□ 0.11
RPE-210ENST00000438204 TOM1O60784 492 aa15.71■□□□□ 0.11
RPE-210ENST00000438204 PKD2Q13563 968 aa15.71■□□□□ 0.11
RPE-210ENST00000438204 SETD1AO15047 1707 aaKnown RBP15.71■□□□□ 0.1
RPE-210ENST00000438204 ZMYM3Q14202 1370 aa15.69■□□□□ 0.1
RPE-210ENST00000438204 RGS17Q9UGC6 210 aaPredicted RBP15.68■□□□□ 0.1
RPE-210ENST00000438204 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
RPE-210ENST00000438204 SHANK2Q9UPX8 1470 aa15.67■□□□□ 0.1
RPE-210ENST00000438204 DNMT1P26358 1616 aaKnown RBP15.67■□□□□ 0.1
RPE-210ENST00000438204 PTPRKQ15262 1439 aa15.67■□□□□ 0.1
RPE-210ENST00000438204 VWDEQ8N2E2 1590 aa15.66■□□□□ 0.1
RPE-210ENST00000438204 LRRIQ1Q96JM4 1722 aa15.65■□□□□ 0.1
RPE-210ENST00000438204 STRCP1A6NGW2 1772 aa15.62■□□□□ 0.09
RPE-210ENST00000438204 TROQ12816 1431 aaPredicted RBP15.62■□□□□ 0.09
RPE-210ENST00000438204 SAMD9LQ8IVG5 1584 aa15.62■□□□□ 0.09
RPE-210ENST00000438204 A2ML1A8K2U0 1454 aa15.61■□□□□ 0.09
RPE-210ENST00000438204 RNF17Q9BXT8 1623 aaKnown RBP15.61■□□□□ 0.09
RPE-210ENST00000438204 ATP1B4Q9UN42 357 aaPredicted RBP15.6■□□□□ 0.09
RPE-210ENST00000438204 PLXNC1O60486 1568 aa15.6■□□□□ 0.09
RPE-210ENST00000438204 CDC42BPAQ5VT25 1732 aa15.59■□□□□ 0.09
RPE-210ENST00000438204 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
RPE-210ENST00000438204 CLIP1P30622 1438 aa15.57■□□□□ 0.08
RPE-210ENST00000438204 POTEAQ6S8J7 498 aa15.56■□□□□ 0.08
RPE-210ENST00000438204 SYCP2Q9BX26 1530 aa15.56■□□□□ 0.08
RPE-210ENST00000438204 SYNMO15061 1565 aa15.54■□□□□ 0.08
RPE-210ENST00000438204 INO80Q9ULG1 1556 aaPredicted RBP15.54■□□□□ 0.08
RPE-210ENST00000438204 ATP7AQ04656 1500 aa15.54■□□□□ 0.08
RPE-210ENST00000438204 IQGAP1P46940 1657 aa15.53■□□□□ 0.08
RPE-210ENST00000438204 LRRC7Q96NW7 1537 aa15.53■□□□□ 0.08
RPE-210ENST00000438204 CDK11AQ9UQ88 783 aaPredicted RBP15.51■□□□□ 0.07
RPE-210ENST00000438204 A2MP01023 1474 aa15.51■□□□□ 0.07
RPE-210ENST00000438204 FMN1Q68DA7 1419 aa15.5■□□□□ 0.07
RPE-210ENST00000438204 GGT6Q6P531 493 aa15.49■□□□□ 0.07
RPE-210ENST00000438204 XIRP1Q702N8 1843 aaKnown RBP15.49■□□□□ 0.07
RPE-210ENST00000438204 DEPDC5O75140 1603 aa15.49■□□□□ 0.07
RPE-210ENST00000438204 NPHP4O75161 1426 aaPredicted RBP15.49■□□□□ 0.07
RPE-210ENST00000438204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms