RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
SMAD9-IT1-201ENST00000437983 PREX1Q8TCU6 1659 aa21.5■■□□□ 1.03
SMAD9-IT1-201ENST00000437983 ZFYVE16Q7Z3T8 1539 aa21.49■■□□□ 1.03
SMAD9-IT1-201ENST00000437983 ZMYM4Q5VZL5 1548 aa21.45■■□□□ 1.02
SMAD9-IT1-201ENST00000437983 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
SMAD9-IT1-201ENST00000437983 EFCAB5A4FU69 1503 aa21.44■■□□□ 1.02
SMAD9-IT1-201ENST00000437983 LTBP4Q8N2S1 1624 aa21.44■■□□□ 1.02
SMAD9-IT1-201ENST00000437983 ARHGEF12Q9NZN5 1544 aa21.43■■□□□ 1.02
SMAD9-IT1-201ENST00000437983 HECW1Q76N89 1606 aa21.4■■□□□ 1.02
SMAD9-IT1-201ENST00000437983 RAPGEF6Q8TEU7 1601 aa21.4■■□□□ 1.02
SMAD9-IT1-201ENST00000437983 PTPRTO14522 1441 aa21.4■■□□□ 1.02
SMAD9-IT1-201ENST00000437983 MAGI2Q86UL8 1455 aa21.39■■□□□ 1.01
SMAD9-IT1-201ENST00000437983 UHRF1BP1Q6BDS2 1440 aa21.38■■□□□ 1.01
SMAD9-IT1-201ENST00000437983 NUP153P49790 1475 aaKnown RBP21.37■■□□□ 1.01
SMAD9-IT1-201ENST00000437983 PRXQ9BXM0 1461 aa21.35■■□□□ 1.01
SMAD9-IT1-201ENST00000437983 CFAP74Q9C0B2 1584 aa21.35■■□□□ 1.01
SMAD9-IT1-201ENST00000437983 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.34■■□□□ 1.01
SMAD9-IT1-201ENST00000437983 ATP10AO60312 1499 aa21.33■■□□□ 1.01
SMAD9-IT1-201ENST00000437983 IQSEC2Q5JU85 1478 aa21.33■■□□□ 1.01
SMAD9-IT1-201ENST00000437983 PLEKHD1A6NEE1 506 aa21.33■■□□□ 1.01
SMAD9-IT1-201ENST00000437983 SCAPERQ9BY12 1400 aa21.31■■□□□ 1
SMAD9-IT1-201ENST00000437983 C9orf84Q5VXU9 1444 aa21.3■■□□□ 1
SMAD9-IT1-201ENST00000437983 SAMD9Q5K651 1589 aa21.29■■□□□ 1
SMAD9-IT1-201ENST00000437983 UBAP1LF5GYI3 381 aa21.28■■□□□ 1
SMAD9-IT1-201ENST00000437983 SETD1BQ9UPS6 1966 aaKnown RBP21.27■■□□□ 1
SMAD9-IT1-201ENST00000437983 NCOA1Q15788 1441 aa21.23■□□□□ 0.99
SMAD9-IT1-201ENST00000437983 ZNF335Q9H4Z2 1342 aaPredicted RBP21.22■□□□□ 0.99
SMAD9-IT1-201ENST00000437983 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
SMAD9-IT1-201ENST00000437983 C3P01024 1663 aa21.2■□□□□ 0.98
SMAD9-IT1-201ENST00000437983 PLCH2O75038 1416 aa21.19■□□□□ 0.98
SMAD9-IT1-201ENST00000437983 MED1Q15648 1581 aaPredicted RBP21.18■□□□□ 0.98
SMAD9-IT1-201ENST00000437983 NCBP3Q53F19 620 aaKnown RBP21.17■□□□□ 0.98
SMAD9-IT1-201ENST00000437983 TRAPPC8Q9Y2L5 1435 aa21.16■□□□□ 0.98
SMAD9-IT1-201ENST00000437983 NCKAP5LQ9HCH0 1330 aa21.16■□□□□ 0.98
SMAD9-IT1-201ENST00000437983 HSPA1LP34931 641 aa21.15■□□□□ 0.98
SMAD9-IT1-201ENST00000437983 POTEDQ86YR6 584 aa21.15■□□□□ 0.98
SMAD9-IT1-201ENST00000437983 AFAP1Q8N556 730 aa21.15■□□□□ 0.98
SMAD9-IT1-201ENST00000437983 SLC4A1APQ9BWU0 796 aaKnown RBP21.15■□□□□ 0.98
SMAD9-IT1-201ENST00000437983 CAMSAP1Q5T5Y3 1602 aa21.13■□□□□ 0.97
SMAD9-IT1-201ENST00000437983 MYT1LQ9UL68 1186 aa21.11■□□□□ 0.97
SMAD9-IT1-201ENST00000437983 CDK13Q14004 1512 aaKnown RBP21.1■□□□□ 0.97
SMAD9-IT1-201ENST00000437983 EFCAB2Q5VUJ9 269 aa21.1■□□□□ 0.97
SMAD9-IT1-201ENST00000437983 DIP2CQ9Y2E4 1556 aa21.09■□□□□ 0.97
SMAD9-IT1-201ENST00000437983 ESF1Q9H501 851 aaKnown RBP21.08■□□□□ 0.97
SMAD9-IT1-201ENST00000437983 SCAF1Q9H7N4 1312 aaKnown RBP21.07■□□□□ 0.96
SMAD9-IT1-201ENST00000437983 PIP4K2BP78356 416 aa21.07■□□□□ 0.96
SMAD9-IT1-201ENST00000437983 ZNF518AQ6AHZ1 1483 aa21.07■□□□□ 0.96
SMAD9-IT1-201ENST00000437983 KDM5CP41229 1560 aa21.06■□□□□ 0.96
SMAD9-IT1-201ENST00000437983 REREQ9P2R6 1566 aa21.03■□□□□ 0.96
SMAD9-IT1-201ENST00000437983 ABCA6Q8N139 1617 aa21.03■□□□□ 0.96
SMAD9-IT1-201ENST00000437983 MYO5CQ9NQX4 1742 aa21.01■□□□□ 0.95
SMAD9-IT1-201ENST00000437983 AGLP35573 1532 aa20.99■□□□□ 0.95
SMAD9-IT1-201ENST00000437983 CSRNP3Q8WYN3 585 aa20.97■□□□□ 0.95
SMAD9-IT1-201ENST00000437983 CNTLNQ9NXG0 1405 aa20.96■□□□□ 0.95
SMAD9-IT1-201ENST00000437983 MLH3Q9UHC1 1453 aa20.96■□□□□ 0.95
SMAD9-IT1-201ENST00000437983 PKD2Q13563 968 aa20.96■□□□□ 0.95
SMAD9-IT1-201ENST00000437983 NPATQ14207 1427 aa20.95■□□□□ 0.95
SMAD9-IT1-201ENST00000437983 ARHGAP5Q13017 1502 aa20.95■□□□□ 0.94
SMAD9-IT1-201ENST00000437983 KIF14Q15058 1648 aa20.95■□□□□ 0.94
SMAD9-IT1-201ENST00000437983 ZMYM3Q14202 1370 aa20.95■□□□□ 0.94
SMAD9-IT1-201ENST00000437983 TCOF1Q13428 1488 aaKnown RBP20.94■□□□□ 0.94
SMAD9-IT1-201ENST00000437983 TOM1O60784 492 aa20.93■□□□□ 0.94
SMAD9-IT1-201ENST00000437983 NPM3O75607 178 aaKnown RBP20.93■□□□□ 0.94
SMAD9-IT1-201ENST00000437983 ATP1B4Q9UN42 357 aaPredicted RBP20.92■□□□□ 0.94
SMAD9-IT1-201ENST00000437983 PLA2R1Q13018 1463 aa20.92■□□□□ 0.94
SMAD9-IT1-201ENST00000437983 MYO3AQ8NEV4 1616 aa20.87■□□□□ 0.93
SMAD9-IT1-201ENST00000437983 MROH2AA6NES4 1674 aa20.86■□□□□ 0.93
SMAD9-IT1-201ENST00000437983 ZNF142P52746 1687 aaPredicted RBP20.86■□□□□ 0.93
SMAD9-IT1-201ENST00000437983 CEP170BQ9Y4F5 1589 aaPredicted RBP20.85■□□□□ 0.93
SMAD9-IT1-201ENST00000437983 KIDINS220Q9ULH0 1771 aa20.85■□□□□ 0.93
SMAD9-IT1-201ENST00000437983 SUPT6HQ7KZ85 1726 aaKnown RBP20.85■□□□□ 0.93
SMAD9-IT1-201ENST00000437983 RGS17Q9UGC6 210 aaPredicted RBP20.85■□□□□ 0.93
SMAD9-IT1-201ENST00000437983 ALKQ9UM73 1620 aa20.83■□□□□ 0.93
SMAD9-IT1-201ENST00000437983 CDC42BPBQ9Y5S2 1711 aa20.83■□□□□ 0.92
SMAD9-IT1-201ENST00000437983 PTPRKQ15262 1439 aa20.82■□□□□ 0.92
SMAD9-IT1-201ENST00000437983 CDK11AQ9UQ88 783 aaPredicted RBP20.82■□□□□ 0.92
SMAD9-IT1-201ENST00000437983 TROQ12816 1431 aaPredicted RBP20.81■□□□□ 0.92
SMAD9-IT1-201ENST00000437983 ABCC1P33527 1531 aa20.81■□□□□ 0.92
SMAD9-IT1-201ENST00000437983 CLTCQ00610 1675 aaKnown RBP20.8■□□□□ 0.92
SMAD9-IT1-201ENST00000437983 CPS1P31327 1500 aa20.8■□□□□ 0.92
SMAD9-IT1-201ENST00000437983 SHANK2Q9UPX8 1470 aa20.8■□□□□ 0.92
SMAD9-IT1-201ENST00000437983 ITSN2Q9NZM3 1697 aa20.79■□□□□ 0.92
SMAD9-IT1-201ENST00000437983 NEURL4Q96JN8 1562 aa20.74■□□□□ 0.91
SMAD9-IT1-201ENST00000437983 DNMT1P26358 1616 aaKnown RBP20.74■□□□□ 0.91
SMAD9-IT1-201ENST00000437983 CLIP1P30622 1438 aa20.73■□□□□ 0.91
SMAD9-IT1-201ENST00000437983 PREX2Q70Z35 1606 aa20.72■□□□□ 0.91
SMAD9-IT1-201ENST00000437983 GGT6Q6P531 493 aa20.72■□□□□ 0.91
SMAD9-IT1-201ENST00000437983 A2ML1A8K2U0 1454 aa20.72■□□□□ 0.91
SMAD9-IT1-201ENST00000437983 SAMD9LQ8IVG5 1584 aa20.72■□□□□ 0.91
SMAD9-IT1-201ENST00000437983 CNKSR2Q8WXI2 1034 aa20.7■□□□□ 0.9
SMAD9-IT1-201ENST00000437983 VWDEQ8N2E2 1590 aa20.7■□□□□ 0.9
SMAD9-IT1-201ENST00000437983 FMN1Q68DA7 1419 aa20.69■□□□□ 0.9
SMAD9-IT1-201ENST00000437983 LRRIQ1Q96JM4 1722 aa20.68■□□□□ 0.9
SMAD9-IT1-201ENST00000437983 POTEAQ6S8J7 498 aa20.68■□□□□ 0.9
SMAD9-IT1-201ENST00000437983 SPAG9O60271 1321 aaKnown RBP20.68■□□□□ 0.9
SMAD9-IT1-201ENST00000437983 POLR1AO95602 1720 aaPredicted RBP20.67■□□□□ 0.9
SMAD9-IT1-201ENST00000437983 ZNF777Q9ULD5 760 aaPredicted RBP20.67■□□□□ 0.9
SMAD9-IT1-201ENST00000437983 HNRNPMP52272 730 aaKnown RBP eCLIP20.65■□□□□ 0.9
SMAD9-IT1-201ENST00000437983 PLXNC1O60486 1568 aa20.64■□□□□ 0.9
SMAD9-IT1-201ENST00000437983 FBXO31Q5XUX0 539 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms