RNA–Protein interactions for RNA: ENST00000437642.6

MMP2-202, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-202ENST00000437642 KIAA0586Q9BVV6 1533 aa17.18■□□□□ 0.34
MMP2-202ENST00000437642 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
MMP2-202ENST00000437642 DNMT1P26358 1616 aaKnown RBP17.18■□□□□ 0.34
MMP2-202ENST00000437642 ROCK1Q13464 1354 aa17.18■□□□□ 0.34
MMP2-202ENST00000437642 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
MMP2-202ENST00000437642 RAPGEF6Q8TEU7 1601 aa17.15■□□□□ 0.34
MMP2-202ENST00000437642 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
MMP2-202ENST00000437642 HNRNPUQ00839 825 aaKnown RBP eCLIP17.15■□□□□ 0.34
MMP2-202ENST00000437642 RPRD2Q5VT52 1461 aaKnown RBP17.14■□□□□ 0.34
MMP2-202ENST00000437642 CNTLNQ9NXG0 1405 aa17.14■□□□□ 0.33
MMP2-202ENST00000437642 TEX14Q8IWB6 1497 aa17.14■□□□□ 0.33
MMP2-202ENST00000437642 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
MMP2-202ENST00000437642 GRIN2AQ12879 1464 aa17.13■□□□□ 0.33
MMP2-202ENST00000437642 NCOA1Q15788 1441 aa17.12■□□□□ 0.33
MMP2-202ENST00000437642 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
MMP2-202ENST00000437642 CCDC7Q96M83 1385 aa17.11■□□□□ 0.33
MMP2-202ENST00000437642 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
MMP2-202ENST00000437642 PRG4Q92954 1404 aaPredicted RBP17.1■□□□□ 0.33
MMP2-202ENST00000437642 SLC4A1APQ9BWU0 796 aaKnown RBP17.09■□□□□ 0.33
MMP2-202ENST00000437642 CDK11AQ9UQ88 783 aaPredicted RBP17.07■□□□□ 0.32
MMP2-202ENST00000437642 PZPP20742 1482 aa17.06■□□□□ 0.32
MMP2-202ENST00000437642 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
MMP2-202ENST00000437642 TROQ12816 1431 aaPredicted RBP17.06■□□□□ 0.32
MMP2-202ENST00000437642 SPATA31E1Q6ZUB1 1445 aa17.06■□□□□ 0.32
MMP2-202ENST00000437642 PRKRIP1Q9H875 184 aaPredicted RBP17.05■□□□□ 0.32
MMP2-202ENST00000437642 PLB1Q6P1J6 1458 aa17.05■□□□□ 0.32
MMP2-202ENST00000437642 KIF14Q15058 1648 aa17.04■□□□□ 0.32
MMP2-202ENST00000437642 IRX6P78412 446 aaPredicted RBP17.03■□□□□ 0.32
MMP2-202ENST00000437642 GPATCH8Q9UKJ3 1502 aaKnown RBP17.03■□□□□ 0.32
MMP2-202ENST00000437642 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
MMP2-202ENST00000437642 CEP170Q5SW79 1584 aa17.03■□□□□ 0.32
MMP2-202ENST00000437642 CFDP1Q9UEE9 299 aaPredicted RBP17.03■□□□□ 0.32
MMP2-202ENST00000437642 RBM19Q9Y4C8 960 aaKnown RBP17.02■□□□□ 0.32
MMP2-202ENST00000437642 ITSN2Q9NZM3 1697 aa17.01■□□□□ 0.31
MMP2-202ENST00000437642 ADGBQ8N7X0 1667 aa17■□□□□ 0.31
MMP2-202ENST00000437642 ANP32EQ9BTT0 268 aa16.99■□□□□ 0.31
MMP2-202ENST00000437642 POLR1AO95602 1720 aaPredicted RBP16.99■□□□□ 0.31
MMP2-202ENST00000437642 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
MMP2-202ENST00000437642 ZNF777Q9ULD5 760 aaPredicted RBP16.99■□□□□ 0.31
MMP2-202ENST00000437642 MAGI1Q96QZ7 1491 aaPredicted RBP16.99■□□□□ 0.31
MMP2-202ENST00000437642 ADGRL2O95490 1459 aa16.98■□□□□ 0.31
MMP2-202ENST00000437642 MBD5Q9P267 1494 aa16.98■□□□□ 0.31
MMP2-202ENST00000437642 CROCC2H7BZ55 1655 aa16.98■□□□□ 0.31
MMP2-202ENST00000437642 FAM9BQ8IZU0 186 aa16.98■□□□□ 0.31
MMP2-202ENST00000437642 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
MMP2-202ENST00000437642 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
MMP2-202ENST00000437642 SYNJ2O15056 1496 aa16.97■□□□□ 0.31
MMP2-202ENST00000437642 KIAA1107Q9UPP5 1409 aa16.96■□□□□ 0.31
MMP2-202ENST00000437642 FBLN2P98095 1184 aa16.94■□□□□ 0.3
MMP2-202ENST00000437642 PKD2Q13563 968 aa16.93■□□□□ 0.3
MMP2-202ENST00000437642 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
MMP2-202ENST00000437642 ANKRD30AQ9BXX3 1397 aa16.92■□□□□ 0.3
MMP2-202ENST00000437642 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
MMP2-202ENST00000437642 NUP160Q12769 1436 aa16.92■□□□□ 0.3
MMP2-202ENST00000437642 ZBED9Q6R2W3 1325 aa16.91■□□□□ 0.3
MMP2-202ENST00000437642 ZNF326Q5BKZ1 582 aaKnown RBP16.91■□□□□ 0.3
MMP2-202ENST00000437642 JPH4Q96JJ6 628 aa16.91■□□□□ 0.3
MMP2-202ENST00000437642 CARMIL2Q6F5E8 1435 aa16.91■□□□□ 0.3
MMP2-202ENST00000437642 ANKRD50Q9ULJ7 1429 aa16.91■□□□□ 0.3
MMP2-202ENST00000437642 USP47Q96K76 1375 aa16.91■□□□□ 0.3
MMP2-202ENST00000437642 DHX29Q7Z478 1369 aaKnown RBP16.91■□□□□ 0.3
MMP2-202ENST00000437642 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
MMP2-202ENST00000437642 ABCC10Q5T3U5 1492 aa16.89■□□□□ 0.29
MMP2-202ENST00000437642 KDM5CP41229 1560 aa16.88■□□□□ 0.29
MMP2-202ENST00000437642 ABCA8O94911 1581 aa16.87■□□□□ 0.29
MMP2-202ENST00000437642 ERICH6BQ5W0A0 696 aa16.86■□□□□ 0.29
MMP2-202ENST00000437642 C9orf84Q5VXU9 1444 aa16.86■□□□□ 0.29
MMP2-202ENST00000437642 ATP10BO94823 1461 aa16.86■□□□□ 0.29
MMP2-202ENST00000437642 CNGB1Q14028 1251 aaPredicted RBP16.86■□□□□ 0.29
MMP2-202ENST00000437642 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
MMP2-202ENST00000437642 PLEKHD1A6NEE1 506 aa16.85■□□□□ 0.29
MMP2-202ENST00000437642 SHANK2Q9UPX8 1470 aa16.85■□□□□ 0.29
MMP2-202ENST00000437642 NUP155O75694 1391 aa16.85■□□□□ 0.29
MMP2-202ENST00000437642 PPP4R2Q9NY27 417 aa16.85■□□□□ 0.29
MMP2-202ENST00000437642 UHRF1BP1Q6BDS2 1440 aa16.83■□□□□ 0.29
MMP2-202ENST00000437642 RALGAPBQ86X10 1494 aa16.82■□□□□ 0.28
MMP2-202ENST00000437642 KDM5DQ9BY66 1539 aa16.81■□□□□ 0.28
MMP2-202ENST00000437642 MSH5O43196 834 aa16.81■□□□□ 0.28
MMP2-202ENST00000437642 ARHGEF12Q9NZN5 1544 aa16.79■□□□□ 0.28
MMP2-202ENST00000437642 ARID4BQ4LE39 1312 aaPredicted RBP16.78■□□□□ 0.28
MMP2-202ENST00000437642 HNRNPMP52272 730 aaKnown RBP eCLIP16.78■□□□□ 0.28
MMP2-202ENST00000437642 B4GALNT3Q6L9W6 998 aa16.78■□□□□ 0.28
MMP2-202ENST00000437642 KIF15Q9NS87 1388 aa16.78■□□□□ 0.28
MMP2-202ENST00000437642 CARD11Q9BXL7 1154 aa16.78■□□□□ 0.28
MMP2-202ENST00000437642 TSPY4P0CV99 314 aa16.77■□□□□ 0.28
MMP2-202ENST00000437642 TSPY10P0CW01 314 aa16.77■□□□□ 0.28
MMP2-202ENST00000437642 PTPRGP23470 1445 aa16.77■□□□□ 0.28
MMP2-202ENST00000437642 SMG6Q86US8 1419 aaKnown RBP16.76■□□□□ 0.27
MMP2-202ENST00000437642 KDM2AQ9Y2K7 1162 aa16.76■□□□□ 0.27
MMP2-202ENST00000437642 ARHGEF5Q12774 1597 aa16.75■□□□□ 0.27
MMP2-202ENST00000437642 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
MMP2-202ENST00000437642 ROCK2O75116 1388 aaKnown RBP16.74■□□□□ 0.27
MMP2-202ENST00000437642 SENP3-EIF4A1A0A087X0R7 540 aa16.74■□□□□ 0.27
MMP2-202ENST00000437642 ST20-MTHFSA0A0A6YYL1 179 aa16.73■□□□□ 0.27
MMP2-202ENST00000437642 SAMD9LQ8IVG5 1584 aa16.73■□□□□ 0.27
MMP2-202ENST00000437642 DCAF11Q8TEB1 546 aa16.73■□□□□ 0.27
MMP2-202ENST00000437642 PNISRQ8TF01 805 aaKnown RBP16.72■□□□□ 0.27
MMP2-202ENST00000437642 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
MMP2-202ENST00000437642 CDC42BPBQ9Y5S2 1711 aa16.71■□□□□ 0.27
MMP2-202ENST00000437642 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms