RNA–Protein interactions for RNA: ENST00000437042.6

RARB-203, Transcript of retinoic acid receptor beta, humanhuman

TSL 1 (best) BASIC

Gene RARB, Length 2,775 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-203ENST00000437042 ABCC5O15440 1437 aa16.61■□□□□ 0.25
RARB-203ENST00000437042 ROCK1Q13464 1354 aa16.61■□□□□ 0.25
RARB-203ENST00000437042 DNMT1P26358 1616 aaKnown RBP16.6■□□□□ 0.25
RARB-203ENST00000437042 RAPGEF6Q8TEU7 1601 aa16.6■□□□□ 0.25
RARB-203ENST00000437042 NEFLP07196 543 aa16.59■□□□□ 0.25
RARB-203ENST00000437042 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
RARB-203ENST00000437042 ANKRD30BQ9BXX2 1392 aa16.58■□□□□ 0.24
RARB-203ENST00000437042 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
RARB-203ENST00000437042 EIF4G3O43432 1585 aaKnown RBP16.56■□□□□ 0.24
RARB-203ENST00000437042 C11orf95C9JLR9 678 aaPredicted RBP16.55■□□□□ 0.24
RARB-203ENST00000437042 RPRD2Q5VT52 1461 aaKnown RBP16.55■□□□□ 0.24
RARB-203ENST00000437042 NBPF8Q3BBV2 869 aa16.55■□□□□ 0.24
RARB-203ENST00000437042 PRG4Q92954 1404 aaPredicted RBP16.54■□□□□ 0.24
RARB-203ENST00000437042 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
RARB-203ENST00000437042 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
RARB-203ENST00000437042 CNTLNQ9NXG0 1405 aa16.52■□□□□ 0.24
RARB-203ENST00000437042 TEX14Q8IWB6 1497 aa16.52■□□□□ 0.23
RARB-203ENST00000437042 TROQ12816 1431 aaPredicted RBP16.51■□□□□ 0.23
RARB-203ENST00000437042 NCOA1Q15788 1441 aa16.51■□□□□ 0.23
RARB-203ENST00000437042 CCDC7Q96M83 1385 aa16.5■□□□□ 0.23
RARB-203ENST00000437042 CFDP1Q9UEE9 299 aaPredicted RBP16.5■□□□□ 0.23
RARB-203ENST00000437042 PLB1Q6P1J6 1458 aa16.5■□□□□ 0.23
RARB-203ENST00000437042 CCDC184Q52MB2 194 aa16.49■□□□□ 0.23
RARB-203ENST00000437042 CAMSAP2Q08AD1 1489 aa16.49■□□□□ 0.23
RARB-203ENST00000437042 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
RARB-203ENST00000437042 CEP170Q5SW79 1584 aa16.48■□□□□ 0.23
RARB-203ENST00000437042 PZPP20742 1482 aa16.47■□□□□ 0.23
RARB-203ENST00000437042 GPATCH8Q9UKJ3 1502 aaKnown RBP16.47■□□□□ 0.23
RARB-203ENST00000437042 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
RARB-203ENST00000437042 KIF14Q15058 1648 aa16.46■□□□□ 0.23
RARB-203ENST00000437042 ZNF777Q9ULD5 760 aaPredicted RBP16.46■□□□□ 0.23
RARB-203ENST00000437042 ITSN2Q9NZM3 1697 aa16.46■□□□□ 0.23
RARB-203ENST00000437042 PRKRIP1Q9H875 184 aaPredicted RBP16.46■□□□□ 0.23
RARB-203ENST00000437042 SPATA31E1Q6ZUB1 1445 aa16.46■□□□□ 0.22
RARB-203ENST00000437042 FBLN2P98095 1184 aa16.45■□□□□ 0.22
RARB-203ENST00000437042 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
RARB-203ENST00000437042 ADGBQ8N7X0 1667 aa16.44■□□□□ 0.22
RARB-203ENST00000437042 ERCC6Q03468 1493 aa16.43■□□□□ 0.22
RARB-203ENST00000437042 ADCY10Q96PN6 1610 aa16.43■□□□□ 0.22
RARB-203ENST00000437042 KIF7Q2M1P5 1343 aa16.43■□□□□ 0.22
RARB-203ENST00000437042 JPH4Q96JJ6 628 aa16.43■□□□□ 0.22
RARB-203ENST00000437042 ADGRL2O95490 1459 aa16.41■□□□□ 0.22
RARB-203ENST00000437042 CARMIL2Q6F5E8 1435 aa16.41■□□□□ 0.22
RARB-203ENST00000437042 CROCC2H7BZ55 1655 aa16.41■□□□□ 0.22
RARB-203ENST00000437042 POLR1AO95602 1720 aaPredicted RBP16.41■□□□□ 0.22
RARB-203ENST00000437042 KIAA1107Q9UPP5 1409 aa16.39■□□□□ 0.22
RARB-203ENST00000437042 IRX6P78412 446 aaPredicted RBP16.39■□□□□ 0.21
RARB-203ENST00000437042 FAM9BQ8IZU0 186 aa16.39■□□□□ 0.21
RARB-203ENST00000437042 NUP160Q12769 1436 aa16.39■□□□□ 0.21
RARB-203ENST00000437042 PKD2Q13563 968 aa16.38■□□□□ 0.21
RARB-203ENST00000437042 MRS2Q9HD23 443 aa16.38■□□□□ 0.21
RARB-203ENST00000437042 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
RARB-203ENST00000437042 MBD5Q9P267 1494 aa16.37■□□□□ 0.21
RARB-203ENST00000437042 RBM19Q9Y4C8 960 aaKnown RBP16.37■□□□□ 0.21
RARB-203ENST00000437042 ANKRD50Q9ULJ7 1429 aa16.36■□□□□ 0.21
RARB-203ENST00000437042 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
RARB-203ENST00000437042 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
RARB-203ENST00000437042 ZNF326Q5BKZ1 582 aaKnown RBP16.35■□□□□ 0.21
RARB-203ENST00000437042 ABCA8O94911 1581 aa16.33■□□□□ 0.21
RARB-203ENST00000437042 ATP10BO94823 1461 aa16.33■□□□□ 0.2
RARB-203ENST00000437042 ABCC10Q5T3U5 1492 aa16.33■□□□□ 0.2
RARB-203ENST00000437042 USP47Q96K76 1375 aa16.32■□□□□ 0.2
RARB-203ENST00000437042 BCORL1Q5H9F3 1711 aa16.32■□□□□ 0.2
RARB-203ENST00000437042 ANP32EQ9BTT0 268 aa16.31■□□□□ 0.2
RARB-203ENST00000437042 ZBED9Q6R2W3 1325 aa16.31■□□□□ 0.2
RARB-203ENST00000437042 NUP155O75694 1391 aa16.3■□□□□ 0.2
RARB-203ENST00000437042 C9orf84Q5VXU9 1444 aa16.3■□□□□ 0.2
RARB-203ENST00000437042 DHX29Q7Z478 1369 aaKnown RBP16.3■□□□□ 0.2
RARB-203ENST00000437042 POLR3GLQ9BT43 218 aa16.29■□□□□ 0.2
RARB-203ENST00000437042 KDM5CP41229 1560 aa16.28■□□□□ 0.2
RARB-203ENST00000437042 SHANK2Q9UPX8 1470 aa16.28■□□□□ 0.2
RARB-203ENST00000437042 TSPY4P0CV99 314 aa16.27■□□□□ 0.2
RARB-203ENST00000437042 TSPY10P0CW01 314 aa16.27■□□□□ 0.2
RARB-203ENST00000437042 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
RARB-203ENST00000437042 HNRNPMP52272 730 aaKnown RBP eCLIP16.26■□□□□ 0.19
RARB-203ENST00000437042 ERICH6BQ5W0A0 696 aa16.26■□□□□ 0.19
RARB-203ENST00000437042 UHRF1BP1Q6BDS2 1440 aa16.26■□□□□ 0.19
RARB-203ENST00000437042 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
RARB-203ENST00000437042 ARID4BQ4LE39 1312 aaPredicted RBP16.23■□□□□ 0.19
RARB-203ENST00000437042 KDM5DQ9BY66 1539 aa16.23■□□□□ 0.19
RARB-203ENST00000437042 RALGAPBQ86X10 1494 aa16.23■□□□□ 0.19
RARB-203ENST00000437042 KIF15Q9NS87 1388 aa16.23■□□□□ 0.19
RARB-203ENST00000437042 CARD11Q9BXL7 1154 aa16.22■□□□□ 0.19
RARB-203ENST00000437042 KDM2AQ9Y2K7 1162 aa16.22■□□□□ 0.19
RARB-203ENST00000437042 ARHGEF12Q9NZN5 1544 aa16.21■□□□□ 0.18
RARB-203ENST00000437042 ARHGEF5Q12774 1597 aa16.21■□□□□ 0.18
RARB-203ENST00000437042 PTPRGP23470 1445 aa16.2■□□□□ 0.18
RARB-203ENST00000437042 DCAF11Q8TEB1 546 aa16.19■□□□□ 0.18
RARB-203ENST00000437042 CDC42BPBQ9Y5S2 1711 aa16.18■□□□□ 0.18
RARB-203ENST00000437042 ST20-MTHFSA0A0A6YYL1 179 aa16.18■□□□□ 0.18
RARB-203ENST00000437042 SAMD9LQ8IVG5 1584 aa16.18■□□□□ 0.18
RARB-203ENST00000437042 ROCK2O75116 1388 aaKnown RBP16.17■□□□□ 0.18
RARB-203ENST00000437042 B4GALNT3Q6L9W6 998 aa16.16■□□□□ 0.18
RARB-203ENST00000437042 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
RARB-203ENST00000437042 SMG6Q86US8 1419 aaKnown RBP16.15■□□□□ 0.18
RARB-203ENST00000437042 PREX2Q70Z35 1606 aa16.15■□□□□ 0.18
RARB-203ENST00000437042 FAM135AQ9P2D6 1515 aa16.15■□□□□ 0.18
RARB-203ENST00000437042 PNISRQ8TF01 805 aaKnown RBP16.14■□□□□ 0.17
RARB-203ENST00000437042 MSH5O43196 834 aa16.14■□□□□ 0.17
RARB-203ENST00000437042 SENP3-EIF4A1A0A087X0R7 540 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms