RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 NUP153P49790 1475 aaKnown RBP18.34■□□□□ 0.53
COPS7B-212ENST00000436564 AKNAQ7Z591 1439 aa18.34■□□□□ 0.53
COPS7B-212ENST00000436564 SAMD9Q5K651 1589 aa18.33■□□□□ 0.52
COPS7B-212ENST00000436564 ARHGEF40Q8TER5 1519 aa18.32■□□□□ 0.52
COPS7B-212ENST00000436564 FANCAO15360 1455 aa18.32■□□□□ 0.52
COPS7B-212ENST00000436564 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
COPS7B-212ENST00000436564 MLECQ14165 292 aa18.31■□□□□ 0.52
COPS7B-212ENST00000436564 CERKQ8TCT0 537 aa18.31■□□□□ 0.52
COPS7B-212ENST00000436564 RIMS1Q86UR5 1692 aaKnown RBP18.28■□□□□ 0.52
COPS7B-212ENST00000436564 YEATS2Q9ULM3 1422 aa18.26■□□□□ 0.51
COPS7B-212ENST00000436564 ZFYVE16Q7Z3T8 1539 aa18.24■□□□□ 0.51
COPS7B-212ENST00000436564 MAGI2Q86UL8 1455 aa18.24■□□□□ 0.51
COPS7B-212ENST00000436564 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.23■□□□□ 0.51
COPS7B-212ENST00000436564 RICTORQ6R327 1708 aa18.23■□□□□ 0.51
COPS7B-212ENST00000436564 EFCAB5A4FU69 1503 aa18.23■□□□□ 0.51
COPS7B-212ENST00000436564 CFAP74Q9C0B2 1584 aa18.22■□□□□ 0.51
COPS7B-212ENST00000436564 ZMYM4Q5VZL5 1548 aa18.22■□□□□ 0.51
COPS7B-212ENST00000436564 SCAPERQ9BY12 1400 aa18.21■□□□□ 0.51
COPS7B-212ENST00000436564 TTC37Q6PGP7 1564 aa18.17■□□□□ 0.5
COPS7B-212ENST00000436564 HECW1Q76N89 1606 aa18.16■□□□□ 0.5
COPS7B-212ENST00000436564 PLCH2O75038 1416 aa18.16■□□□□ 0.5
COPS7B-212ENST00000436564 CEBPAP49715 358 aaPredicted RBP18.16■□□□□ 0.5
COPS7B-212ENST00000436564 EFCAB2Q5VUJ9 269 aa18.16■□□□□ 0.5
COPS7B-212ENST00000436564 ATP1B4Q9UN42 357 aaPredicted RBP18.16■□□□□ 0.5
COPS7B-212ENST00000436564 EEA1Q15075 1411 aa18.15■□□□□ 0.5
COPS7B-212ENST00000436564 ATP10AO60312 1499 aa18.15■□□□□ 0.5
COPS7B-212ENST00000436564 DISP3Q9P2K9 1392 aa18.15■□□□□ 0.5
COPS7B-212ENST00000436564 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
COPS7B-212ENST00000436564 SIGLEC1Q9BZZ2 1709 aa18.12■□□□□ 0.49
COPS7B-212ENST00000436564 RNF39Q9H2S5 420 aa18.12■□□□□ 0.49
COPS7B-212ENST00000436564 MYT1LQ9UL68 1186 aa18.12■□□□□ 0.49
COPS7B-212ENST00000436564 CDK13Q14004 1512 aaKnown RBP18.12■□□□□ 0.49
COPS7B-212ENST00000436564 ARHGEF12Q9NZN5 1544 aa18.11■□□□□ 0.49
COPS7B-212ENST00000436564 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
COPS7B-212ENST00000436564 CDK11AQ9UQ88 783 aaPredicted RBP18.1■□□□□ 0.49
COPS7B-212ENST00000436564 FER1L4A9Z1Z3 1794 aa18.09■□□□□ 0.49
COPS7B-212ENST00000436564 ILDR2Q71H61 639 aa18.09■□□□□ 0.49
COPS7B-212ENST00000436564 UHRF1BP1Q6BDS2 1440 aa18.08■□□□□ 0.49
COPS7B-212ENST00000436564 AFAP1Q8N556 730 aa18.08■□□□□ 0.48
COPS7B-212ENST00000436564 SOCS7O14512 581 aa18.07■□□□□ 0.48
COPS7B-212ENST00000436564 ESF1Q9H501 851 aaKnown RBP18.05■□□□□ 0.48
COPS7B-212ENST00000436564 FOXD4L1Q9NU39 408 aa18.05■□□□□ 0.48
COPS7B-212ENST00000436564 ZNF518AQ6AHZ1 1483 aa18.04■□□□□ 0.48
COPS7B-212ENST00000436564 PREX1Q8TCU6 1659 aa18.03■□□□□ 0.48
COPS7B-212ENST00000436564 C1QBPQ07021 282 aaKnown RBP18.03■□□□□ 0.48
COPS7B-212ENST00000436564 FMN1Q68DA7 1419 aa18.03■□□□□ 0.48
COPS7B-212ENST00000436564 UBTFP17480 764 aaKnown RBP18.02■□□□□ 0.48
COPS7B-212ENST00000436564 EHMT2Q96KQ7 1210 aa18.02■□□□□ 0.48
COPS7B-212ENST00000436564 ARHGAP5Q13017 1502 aa18■□□□□ 0.47
COPS7B-212ENST00000436564 PTPRTO14522 1441 aa17.98■□□□□ 0.47
COPS7B-212ENST00000436564 CLIP1P30622 1438 aa17.98■□□□□ 0.47
COPS7B-212ENST00000436564 TROQ12816 1431 aaPredicted RBP17.98■□□□□ 0.47
COPS7B-212ENST00000436564 MYO5CQ9NQX4 1742 aa17.95■□□□□ 0.46
COPS7B-212ENST00000436564 STRCQ7RTU9 1775 aa17.95■□□□□ 0.46
COPS7B-212ENST00000436564 TRAPPC8Q9Y2L5 1435 aa17.95■□□□□ 0.46
COPS7B-212ENST00000436564 KDM5CP41229 1560 aa17.95■□□□□ 0.46
COPS7B-212ENST00000436564 KIF14Q15058 1648 aa17.94■□□□□ 0.46
COPS7B-212ENST00000436564 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
COPS7B-212ENST00000436564 MLH3Q9UHC1 1453 aa17.93■□□□□ 0.46
COPS7B-212ENST00000436564 DIP2CQ9Y2E4 1556 aa17.92■□□□□ 0.46
COPS7B-212ENST00000436564 APLP2Q06481 763 aa17.92■□□□□ 0.46
COPS7B-212ENST00000436564 ARHGAP35Q9NRY4 1499 aa17.92■□□□□ 0.46
COPS7B-212ENST00000436564 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
COPS7B-212ENST00000436564 REREQ9P2R6 1566 aa17.91■□□□□ 0.46
COPS7B-212ENST00000436564 SPATA31D1Q6ZQQ2 1576 aa17.89■□□□□ 0.45
COPS7B-212ENST00000436564 CNTLNQ9NXG0 1405 aa17.89■□□□□ 0.45
COPS7B-212ENST00000436564 AGLP35573 1532 aa17.88■□□□□ 0.45
COPS7B-212ENST00000436564 SETD1BQ9UPS6 1966 aaKnown RBP17.88■□□□□ 0.45
COPS7B-212ENST00000436564 NCOA1Q15788 1441 aa17.88■□□□□ 0.45
COPS7B-212ENST00000436564 LTBP4Q8N2S1 1624 aa17.87■□□□□ 0.45
COPS7B-212ENST00000436564 IQSEC2Q5JU85 1478 aa17.86■□□□□ 0.45
COPS7B-212ENST00000436564 ABCA6Q8N139 1617 aa17.86■□□□□ 0.45
COPS7B-212ENST00000436564 C3P01024 1663 aa17.86■□□□□ 0.45
COPS7B-212ENST00000436564 ZMYM3Q14202 1370 aa17.83■□□□□ 0.45
COPS7B-212ENST00000436564 NCKAP5LQ9HCH0 1330 aa17.83■□□□□ 0.44
COPS7B-212ENST00000436564 UBAP1LF5GYI3 381 aa17.83■□□□□ 0.44
COPS7B-212ENST00000436564 CACNB1Q02641 598 aaPredicted RBP17.83■□□□□ 0.44
COPS7B-212ENST00000436564 SAMD1Q6SPF0 538 aaPredicted RBP17.83■□□□□ 0.44
COPS7B-212ENST00000436564 ZNF777Q9ULD5 760 aaPredicted RBP17.83■□□□□ 0.44
COPS7B-212ENST00000436564 ABCC1P33527 1531 aa17.82■□□□□ 0.44
COPS7B-212ENST00000436564 NPATQ14207 1427 aa17.82■□□□□ 0.44
COPS7B-212ENST00000436564 ZNF335Q9H4Z2 1342 aaPredicted RBP17.81■□□□□ 0.44
COPS7B-212ENST00000436564 SPAG9O60271 1321 aaKnown RBP17.8■□□□□ 0.44
COPS7B-212ENST00000436564 CAMSAP1Q5T5Y3 1602 aa17.8■□□□□ 0.44
COPS7B-212ENST00000436564 CCDC18Q5T9S5 1454 aa17.78■□□□□ 0.44
COPS7B-212ENST00000436564 PKD2Q13563 968 aa17.78■□□□□ 0.44
COPS7B-212ENST00000436564 CDC42BPBQ9Y5S2 1711 aa17.78■□□□□ 0.44
COPS7B-212ENST00000436564 PREX2Q70Z35 1606 aa17.77■□□□□ 0.44
COPS7B-212ENST00000436564 HNRNPMP52272 730 aaKnown RBP eCLIP17.77■□□□□ 0.444e-7■■■■□ 20.7
COPS7B-212ENST00000436564 CASKIN1Q8WXD9 1431 aa17.76■□□□□ 0.43
COPS7B-212ENST00000436564 GGT6Q6P531 493 aa17.75■□□□□ 0.43
COPS7B-212ENST00000436564 KIDINS220Q9ULH0 1771 aa17.75■□□□□ 0.43
COPS7B-212ENST00000436564 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
COPS7B-212ENST00000436564 ZBTB22O15209 634 aa17.73■□□□□ 0.43
COPS7B-212ENST00000436564 SAMD9LQ8IVG5 1584 aa17.73■□□□□ 0.43
COPS7B-212ENST00000436564 PLA2R1Q13018 1463 aa17.71■□□□□ 0.43
COPS7B-212ENST00000436564 CFDP1Q9UEE9 299 aaPredicted RBP17.71■□□□□ 0.43
COPS7B-212ENST00000436564 LRRIQ1Q96JM4 1722 aa17.71■□□□□ 0.43
COPS7B-212ENST00000436564 SYCP2Q9BX26 1530 aa17.69■□□□□ 0.42
COPS7B-212ENST00000436564 GPATCH8Q9UKJ3 1502 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms