RNA–Protein interactions for RNA: ENST00000435817.6

FCHSD1-201, Transcript of FCH and double SH3 domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCHSD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCHSD1-201ENST00000435817 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
FCHSD1-201ENST00000435817 FGD6Q6ZV73 1430 aa16.16■□□□□ 0.18
FCHSD1-201ENST00000435817 KIF3BO15066 747 aa16.15■□□□□ 0.18
FCHSD1-201ENST00000435817 TMF1P82094 1093 aa16.13■□□□□ 0.17
FCHSD1-201ENST00000435817 NUTM2DQ5VT03 806 aaPredicted RBP16.13■□□□□ 0.17
FCHSD1-201ENST00000435817 PTPRGP23470 1445 aa16.13■□□□□ 0.17
FCHSD1-201ENST00000435817 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
FCHSD1-201ENST00000435817 CFAP53Q96M91 514 aa16.13■□□□□ 0.17
FCHSD1-201ENST00000435817 STK26Q9P289 416 aa16.13■□□□□ 0.17
FCHSD1-201ENST00000435817 CCDC18Q5T9S5 1454 aa16.12■□□□□ 0.17
FCHSD1-201ENST00000435817 ANKRD30AQ9BXX3 1397 aa16.11■□□□□ 0.17
FCHSD1-201ENST00000435817 A0A0G2JS52 829 aa16.11■□□□□ 0.17
FCHSD1-201ENST00000435817 HSP90AA1P07900 732 aaKnown RBP16.11■□□□□ 0.17
FCHSD1-201ENST00000435817 UPF2Q9HAU5 1272 aaKnown RBP16.1■□□□□ 0.17
FCHSD1-201ENST00000435817 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
FCHSD1-201ENST00000435817 KANK1Q14678 1352 aa16.1■□□□□ 0.17
FCHSD1-201ENST00000435817 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
FCHSD1-201ENST00000435817 CASKIN1Q8WXD9 1431 aa16.1■□□□□ 0.17
FCHSD1-201ENST00000435817 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
FCHSD1-201ENST00000435817 U2SURPO15042 1029 aaKnown RBP16.09■□□□□ 0.17
FCHSD1-201ENST00000435817 NBR1Q14596 966 aa16.09■□□□□ 0.17
FCHSD1-201ENST00000435817 SOX12O15370 315 aa16.08■□□□□ 0.17
FCHSD1-201ENST00000435817 LAS1LQ9Y4W2 734 aaKnown RBP16.08■□□□□ 0.16
FCHSD1-201ENST00000435817 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
FCHSD1-201ENST00000435817 GRIN2BQ13224 1484 aa16.08■□□□□ 0.16
FCHSD1-201ENST00000435817 SRPK2P78362 688 aaKnown RBP16.07■□□□□ 0.16
FCHSD1-201ENST00000435817 RRBP1Q9P2E9 1410 aaKnown RBP16.07■□□□□ 0.16
FCHSD1-201ENST00000435817 MYOM3Q5VTT5 1437 aa16.07■□□□□ 0.16
FCHSD1-201ENST00000435817 B4GALNT3Q6L9W6 998 aa16.07■□□□□ 0.16
FCHSD1-201ENST00000435817 PRG4Q92954 1404 aaPredicted RBP16.06■□□□□ 0.16
FCHSD1-201ENST00000435817 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
FCHSD1-201ENST00000435817 SNAPC4Q5SXM2 1469 aa16.05■□□□□ 0.16
FCHSD1-201ENST00000435817 ABCA10Q8WWZ4 1543 aa16.05■□□□□ 0.16
FCHSD1-201ENST00000435817 MRC2Q9UBG0 1479 aa16.05■□□□□ 0.16
FCHSD1-201ENST00000435817 SPAG9O60271 1321 aaKnown RBP16.05■□□□□ 0.16
FCHSD1-201ENST00000435817 CYB5RLQ6IPT4 315 aa16.05■□□□□ 0.16
FCHSD1-201ENST00000435817 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
FCHSD1-201ENST00000435817 CDK13Q14004 1512 aaKnown RBP16.04■□□□□ 0.16
FCHSD1-201ENST00000435817 CCER2I3L3R5 266 aa16.02■□□□□ 0.15
FCHSD1-201ENST00000435817 ROCK2O75116 1388 aaKnown RBP16.02■□□□□ 0.15
FCHSD1-201ENST00000435817 ST20-MTHFSA0A0A6YYL1 179 aa16.01■□□□□ 0.15
FCHSD1-201ENST00000435817 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
FCHSD1-201ENST00000435817 NUDCQ9Y266 331 aa16■□□□□ 0.15
FCHSD1-201ENST00000435817 AFAP1Q8N556 730 aa16■□□□□ 0.15
FCHSD1-201ENST00000435817 TIAM1Q13009 1591 aa16■□□□□ 0.15
FCHSD1-201ENST00000435817 MORC1Q86VD1 984 aa15.98■□□□□ 0.15
FCHSD1-201ENST00000435817 RGS3P49796 1198 aa15.98■□□□□ 0.15
FCHSD1-201ENST00000435817 PCF11O94913 1555 aaKnown RBP15.97■□□□□ 0.15
FCHSD1-201ENST00000435817 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
FCHSD1-201ENST00000435817 FYCO1Q9BQS8 1478 aa15.97■□□□□ 0.15
FCHSD1-201ENST00000435817 ARXQ96QS3 562 aa15.97■□□□□ 0.15
FCHSD1-201ENST00000435817 RSPH4AQ5TD94 716 aa15.96■□□□□ 0.15
FCHSD1-201ENST00000435817 PPP4R2Q9NY27 417 aa15.96■□□□□ 0.15
FCHSD1-201ENST00000435817 FTSJ3Q8IY81 847 aaKnown RBP15.96■□□□□ 0.15
FCHSD1-201ENST00000435817 MYH16Q9H6N6 1097 aa15.96■□□□□ 0.15
FCHSD1-201ENST00000435817 WASHC2CQ9Y4E1 1318 aa15.96■□□□□ 0.14
FCHSD1-201ENST00000435817 HAP1P54257 671 aaPredicted RBP15.95■□□□□ 0.14
FCHSD1-201ENST00000435817 NBPF8Q3BBV2 869 aa15.94■□□□□ 0.14
FCHSD1-201ENST00000435817 PLB1Q6P1J6 1458 aa15.93■□□□□ 0.14
FCHSD1-201ENST00000435817 IFT140Q96RY7 1462 aa15.92■□□□□ 0.14
FCHSD1-201ENST00000435817 LAMC3Q9Y6N6 1575 aa15.91■□□□□ 0.14
FCHSD1-201ENST00000435817 TRAK1Q9UPV9 953 aa15.91■□□□□ 0.14
FCHSD1-201ENST00000435817 UACAQ9BZF9 1416 aa15.91■□□□□ 0.14
FCHSD1-201ENST00000435817 KTN1Q86UP2 1357 aaKnown RBP15.9■□□□□ 0.14
FCHSD1-201ENST00000435817 KIF15Q9NS87 1388 aa15.89■□□□□ 0.13
FCHSD1-201ENST00000435817 NUTM2FA1L443 756 aa15.88■□□□□ 0.13
FCHSD1-201ENST00000435817 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
FCHSD1-201ENST00000435817 WASHC2AQ641Q2 1341 aa15.87■□□□□ 0.13
FCHSD1-201ENST00000435817 U2AF1L5P0DN76 240 aaPredicted RBP15.87■□□□□ 0.13
FCHSD1-201ENST00000435817 U2AF1Q01081 240 aaKnown RBP eCLIP15.87■□□□□ 0.13
FCHSD1-201ENST00000435817 HDGFP51858 240 aaKnown RBP15.87■□□□□ 0.13
FCHSD1-201ENST00000435817 EPRSP07814 1512 aaKnown RBP15.86■□□□□ 0.13
FCHSD1-201ENST00000435817 ANKRD50Q9ULJ7 1429 aa15.85■□□□□ 0.13
FCHSD1-201ENST00000435817 CCDC184Q52MB2 194 aa15.85■□□□□ 0.13
FCHSD1-201ENST00000435817 PTPRKQ15262 1439 aa15.85■□□□□ 0.13
FCHSD1-201ENST00000435817 NAIPQ13075 1403 aa15.84■□□□□ 0.13
FCHSD1-201ENST00000435817 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
FCHSD1-201ENST00000435817 NBPF1Q3BBV0 1214 aa15.84■□□□□ 0.13
FCHSD1-201ENST00000435817 PRKRIP1Q9H875 184 aaPredicted RBP15.84■□□□□ 0.13
FCHSD1-201ENST00000435817 EFCAB5A4FU69 1503 aa15.84■□□□□ 0.13
FCHSD1-201ENST00000435817 CCDC144AA2RUR9 1427 aa15.84■□□□□ 0.13
FCHSD1-201ENST00000435817 RALBP1Q15311 655 aa15.83■□□□□ 0.12
FCHSD1-201ENST00000435817 USP47Q96K76 1375 aa15.83■□□□□ 0.12
FCHSD1-201ENST00000435817 CCDC146Q8IYE0 955 aa15.82■□□□□ 0.12
FCHSD1-201ENST00000435817 HDGFL2Q7Z4V5 671 aaPredicted RBP15.82■□□□□ 0.12
FCHSD1-201ENST00000435817 KIF7Q2M1P5 1343 aa15.81■□□□□ 0.12
FCHSD1-201ENST00000435817 PANK3Q9H999 370 aa15.81■□□□□ 0.12
FCHSD1-201ENST00000435817 KIAA0586Q9BVV6 1533 aa15.81■□□□□ 0.12
FCHSD1-201ENST00000435817 C11orf95C9JLR9 678 aaPredicted RBP15.81■□□□□ 0.12
FCHSD1-201ENST00000435817 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
FCHSD1-201ENST00000435817 HFM1A2PYH4 1435 aa15.8■□□□□ 0.12
FCHSD1-201ENST00000435817 IQGAP2Q13576 1575 aa15.8■□□□□ 0.12
FCHSD1-201ENST00000435817 NLRP13Q86W25 1043 aa15.8■□□□□ 0.12
FCHSD1-201ENST00000435817 RCAN3Q9UKA8 241 aa15.79■□□□□ 0.12
FCHSD1-201ENST00000435817 TROQ12816 1431 aaPredicted RBP15.78■□□□□ 0.12
FCHSD1-201ENST00000435817 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
FCHSD1-201ENST00000435817 GRIN2AQ12879 1464 aa15.78■□□□□ 0.12
FCHSD1-201ENST00000435817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.76■□□□□ 0.11
FCHSD1-201ENST00000435817 DAPK1P53355 1430 aa15.74■□□□□ 0.11
FCHSD1-201ENST00000435817 RAPGEF3O95398 923 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms