RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 HNRNPUL2Q1KMD3 747 aaKnown RBP18.07■□□□□ 0.48
CPNE1-214ENST00000435747 ARHGEF12Q9NZN5 1544 aa18.07■□□□□ 0.48
CPNE1-214ENST00000435747 MAGI2Q86UL8 1455 aa18.07■□□□□ 0.48
CPNE1-214ENST00000435747 HECW1Q76N89 1606 aa18.02■□□□□ 0.48
CPNE1-214ENST00000435747 UBAP1LF5GYI3 381 aa18.01■□□□□ 0.47
CPNE1-214ENST00000435747 P3H3Q8IVL6 736 aa18.01■□□□□ 0.47
CPNE1-214ENST00000435747 RAPGEF6Q8TEU7 1601 aa18■□□□□ 0.47
CPNE1-214ENST00000435747 MED1Q15648 1581 aaPredicted RBP17.98■□□□□ 0.47
CPNE1-214ENST00000435747 C9orf84Q5VXU9 1444 aa17.98■□□□□ 0.47
CPNE1-214ENST00000435747 ATP10AO60312 1499 aa17.97■□□□□ 0.47
CPNE1-214ENST00000435747 NCOA1Q15788 1441 aa17.93■□□□□ 0.46
CPNE1-214ENST00000435747 PLEKHD1A6NEE1 506 aa17.93■□□□□ 0.46
CPNE1-214ENST00000435747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.93■□□□□ 0.46
CPNE1-214ENST00000435747 SCAPERQ9BY12 1400 aa17.9■□□□□ 0.46
CPNE1-214ENST00000435747 C3P01024 1663 aa17.9■□□□□ 0.46
CPNE1-214ENST00000435747 NUP153P49790 1475 aaKnown RBP17.9■□□□□ 0.46
CPNE1-214ENST00000435747 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
CPNE1-214ENST00000435747 ZNF335Q9H4Z2 1342 aaPredicted RBP17.88■□□□□ 0.45
CPNE1-214ENST00000435747 HSPA1LP34931 641 aa17.86■□□□□ 0.45
CPNE1-214ENST00000435747 TRAPPC8Q9Y2L5 1435 aa17.86■□□□□ 0.45
CPNE1-214ENST00000435747 SAMD9Q5K651 1589 aa17.86■□□□□ 0.45
CPNE1-214ENST00000435747 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
CPNE1-214ENST00000435747 CAMSAP1Q5T5Y3 1602 aa17.84■□□□□ 0.45
CPNE1-214ENST00000435747 ESF1Q9H501 851 aaKnown RBP17.84■□□□□ 0.45
CPNE1-214ENST00000435747 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
CPNE1-214ENST00000435747 PIP4K2BP78356 416 aa17.8■□□□□ 0.44
CPNE1-214ENST00000435747 PLCH2O75038 1416 aa17.8■□□□□ 0.44
CPNE1-214ENST00000435747 NCKAP5LQ9HCH0 1330 aa17.79■□□□□ 0.44
CPNE1-214ENST00000435747 MYT1LQ9UL68 1186 aa17.79■□□□□ 0.44
CPNE1-214ENST00000435747 ZNF518AQ6AHZ1 1483 aa17.76■□□□□ 0.43
CPNE1-214ENST00000435747 REREQ9P2R6 1566 aa17.75■□□□□ 0.43
CPNE1-214ENST00000435747 TOM1O60784 492 aa17.75■□□□□ 0.43
CPNE1-214ENST00000435747 DIP2CQ9Y2E4 1556 aa17.74■□□□□ 0.43
CPNE1-214ENST00000435747 EFCAB2Q5VUJ9 269 aa17.74■□□□□ 0.43
CPNE1-214ENST00000435747 MYO5CQ9NQX4 1742 aa17.73■□□□□ 0.43
CPNE1-214ENST00000435747 PKD2Q13563 968 aa17.73■□□□□ 0.43
CPNE1-214ENST00000435747 KDM5CP41229 1560 aa17.73■□□□□ 0.43
CPNE1-214ENST00000435747 CNTLNQ9NXG0 1405 aa17.72■□□□□ 0.43
CPNE1-214ENST00000435747 AGLP35573 1532 aa17.72■□□□□ 0.43
CPNE1-214ENST00000435747 SUPT6HQ7KZ85 1726 aaKnown RBP17.72■□□□□ 0.43
CPNE1-214ENST00000435747 AFAP1Q8N556 730 aa17.7■□□□□ 0.42
CPNE1-214ENST00000435747 NPATQ14207 1427 aa17.7■□□□□ 0.42
CPNE1-214ENST00000435747 PLA2R1Q13018 1463 aa17.69■□□□□ 0.42
CPNE1-214ENST00000435747 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
CPNE1-214ENST00000435747 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
CPNE1-214ENST00000435747 RANGAP1P46060 587 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-214ENST00000435747 TCOF1Q13428 1488 aaKnown RBP17.66■□□□□ 0.42
CPNE1-214ENST00000435747 MROH2AA6NES4 1674 aa17.66■□□□□ 0.42
CPNE1-214ENST00000435747 ZNF142P52746 1687 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-214ENST00000435747 CDK13Q14004 1512 aaKnown RBP17.66■□□□□ 0.42
CPNE1-214ENST00000435747 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
CPNE1-214ENST00000435747 CPS1P31327 1500 aa17.63■□□□□ 0.41
CPNE1-214ENST00000435747 ARHGAP5Q13017 1502 aa17.63■□□□□ 0.41
CPNE1-214ENST00000435747 MYO3AQ8NEV4 1616 aa17.63■□□□□ 0.41
CPNE1-214ENST00000435747 CEP170BQ9Y4F5 1589 aaPredicted RBP17.62■□□□□ 0.41
CPNE1-214ENST00000435747 ZMYM3Q14202 1370 aa17.61■□□□□ 0.41
CPNE1-214ENST00000435747 PTPRKQ15262 1439 aa17.6■□□□□ 0.41
CPNE1-214ENST00000435747 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-214ENST00000435747 SHANK2Q9UPX8 1470 aa17.56■□□□□ 0.4
CPNE1-214ENST00000435747 RGS17Q9UGC6 210 aaPredicted RBP17.56■□□□□ 0.4
CPNE1-214ENST00000435747 KIF14Q15058 1648 aa17.56■□□□□ 0.4
CPNE1-214ENST00000435747 KIDINS220Q9ULH0 1771 aa17.54■□□□□ 0.4
CPNE1-214ENST00000435747 CLTCQ00610 1675 aaKnown RBP17.54■□□□□ 0.4
CPNE1-214ENST00000435747 POLR1AO95602 1720 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-214ENST00000435747 CDK11AQ9UQ88 783 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-214ENST00000435747 ALKQ9UM73 1620 aa17.53■□□□□ 0.4
CPNE1-214ENST00000435747 ITSN2Q9NZM3 1697 aa17.51■□□□□ 0.39
CPNE1-214ENST00000435747 CDC42BPBQ9Y5S2 1711 aa17.5■□□□□ 0.39
CPNE1-214ENST00000435747 ATP1B4Q9UN42 357 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-214ENST00000435747 ABCC1P33527 1531 aa17.49■□□□□ 0.39
CPNE1-214ENST00000435747 DNMT1P26358 1616 aaKnown RBP17.48■□□□□ 0.39
CPNE1-214ENST00000435747 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
CPNE1-214ENST00000435747 A2ML1A8K2U0 1454 aa17.48■□□□□ 0.39
CPNE1-214ENST00000435747 NEURL4Q96JN8 1562 aa17.48■□□□□ 0.39
CPNE1-214ENST00000435747 CLIP1P30622 1438 aa17.47■□□□□ 0.39
CPNE1-214ENST00000435747 TROQ12816 1431 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-214ENST00000435747 VWDEQ8N2E2 1590 aa17.45■□□□□ 0.38
CPNE1-214ENST00000435747 POTEAQ6S8J7 498 aa17.44■□□□□ 0.38
CPNE1-214ENST00000435747 PREX2Q70Z35 1606 aa17.43■□□□□ 0.38
CPNE1-214ENST00000435747 RNF17Q9BXT8 1623 aaKnown RBP17.42■□□□□ 0.38
CPNE1-214ENST00000435747 SETD1AO15047 1707 aaKnown RBP17.41■□□□□ 0.38
CPNE1-214ENST00000435747 SAMD9LQ8IVG5 1584 aa17.4■□□□□ 0.38
CPNE1-214ENST00000435747 GGT6Q6P531 493 aa17.4■□□□□ 0.38
CPNE1-214ENST00000435747 ANKLE2Q86XL3 938 aa17.39■□□□□ 0.37
CPNE1-214ENST00000435747 EEA1Q15075 1411 aa17.38■□□□□ 0.37
CPNE1-214ENST00000435747 FMN1Q68DA7 1419 aa17.38■□□□□ 0.37
CPNE1-214ENST00000435747 SPAG9O60271 1321 aaKnown RBP17.37■□□□□ 0.37
CPNE1-214ENST00000435747 NPHP4O75161 1426 aaPredicted RBP17.36■□□□□ 0.37
CPNE1-214ENST00000435747 LRRC7Q96NW7 1537 aa17.36■□□□□ 0.37
CPNE1-214ENST00000435747 PLXNC1O60486 1568 aa17.36■□□□□ 0.37
CPNE1-214ENST00000435747 SYNMO15061 1565 aa17.35■□□□□ 0.37
CPNE1-214ENST00000435747 STRCP1A6NGW2 1772 aa17.34■□□□□ 0.37
CPNE1-214ENST00000435747 A2MP01023 1474 aa17.34■□□□□ 0.37
CPNE1-214ENST00000435747 ATP7AQ04656 1500 aa17.33■□□□□ 0.37
CPNE1-214ENST00000435747 TNRQ92752 1358 aa17.33■□□□□ 0.36
CPNE1-214ENST00000435747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.369e-7■□□□□ 9.5
CPNE1-214ENST00000435747 SRCAPQ6ZRS2 3230 aa17.32■□□□□ 0.36
CPNE1-214ENST00000435747 MED14O60244 1454 aa17.32■□□□□ 0.36
CPNE1-214ENST00000435747 CDC42BPAQ5VT25 1732 aa17.32■□□□□ 0.36
CPNE1-214ENST00000435747 IQGAP1P46940 1657 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms