RNA–Protein interactions for RNA: ENST00000434944.1

LINC00475-206, long intergenic non-protein coding RNA 475, humanhuman

TSL 3 BASIC

Gene LINC00475, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-206ENST00000434944 PLEKHD1A6NEE1 506 aa16.62■□□□□ 0.25
LINC00475-206ENST00000434944 CEBPAP49715 358 aaPredicted RBP16.62■□□□□ 0.25
LINC00475-206ENST00000434944 HECW1Q76N89 1606 aa16.62■□□□□ 0.25
LINC00475-206ENST00000434944 STRCQ7RTU9 1775 aa16.61■□□□□ 0.25
LINC00475-206ENST00000434944 CFAP74Q9C0B2 1584 aa16.61■□□□□ 0.25
LINC00475-206ENST00000434944 PREX1Q8TCU6 1659 aa16.6■□□□□ 0.25
LINC00475-206ENST00000434944 ARHGEF12Q9NZN5 1544 aa16.57■□□□□ 0.24
LINC00475-206ENST00000434944 MAGI2Q86UL8 1455 aa16.57■□□□□ 0.24
LINC00475-206ENST00000434944 SPATA31D1Q6ZQQ2 1576 aa16.56■□□□□ 0.24
LINC00475-206ENST00000434944 SCAPERQ9BY12 1400 aa16.56■□□□□ 0.24
LINC00475-206ENST00000434944 SETD1BQ9UPS6 1966 aaKnown RBP16.54■□□□□ 0.24
LINC00475-206ENST00000434944 ATP10AO60312 1499 aa16.54■□□□□ 0.24
LINC00475-206ENST00000434944 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
LINC00475-206ENST00000434944 DMRT2Q9Y5R5 561 aa16.52■□□□□ 0.24
LINC00475-206ENST00000434944 C9orf84Q5VXU9 1444 aa16.51■□□□□ 0.23
LINC00475-206ENST00000434944 CDK13Q14004 1512 aaKnown RBP16.5■□□□□ 0.23
LINC00475-206ENST00000434944 PLCH2O75038 1416 aa16.5■□□□□ 0.23
LINC00475-206ENST00000434944 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
LINC00475-206ENST00000434944 LTBP4Q8N2S1 1624 aa16.46■□□□□ 0.23
LINC00475-206ENST00000434944 PTPRTO14522 1441 aa16.45■□□□□ 0.22
LINC00475-206ENST00000434944 C3P01024 1663 aa16.43■□□□□ 0.22
LINC00475-206ENST00000434944 MYO5CQ9NQX4 1742 aa16.43■□□□□ 0.22
LINC00475-206ENST00000434944 EFCAB2Q5VUJ9 269 aa16.43■□□□□ 0.22
LINC00475-206ENST00000434944 AFAP1Q8N556 730 aa16.43■□□□□ 0.22
LINC00475-206ENST00000434944 MYT1LQ9UL68 1186 aa16.4■□□□□ 0.22
LINC00475-206ENST00000434944 DIP2CQ9Y2E4 1556 aa16.39■□□□□ 0.21
LINC00475-206ENST00000434944 KIF14Q15058 1648 aa16.39■□□□□ 0.21
LINC00475-206ENST00000434944 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
LINC00475-206ENST00000434944 KDM5CP41229 1560 aa16.38■□□□□ 0.21
LINC00475-206ENST00000434944 ZNF518AQ6AHZ1 1483 aa16.38■□□□□ 0.21
LINC00475-206ENST00000434944 ABCA6Q8N139 1617 aa16.37■□□□□ 0.21
LINC00475-206ENST00000434944 NCOA1Q15788 1441 aa16.36■□□□□ 0.21
LINC00475-206ENST00000434944 IQSEC2Q5JU85 1478 aa16.35■□□□□ 0.21
LINC00475-206ENST00000434944 TRAPPC8Q9Y2L5 1435 aa16.35■□□□□ 0.21
LINC00475-206ENST00000434944 ARHGAP5Q13017 1502 aa16.35■□□□□ 0.21
LINC00475-206ENST00000434944 REREQ9P2R6 1566 aa16.34■□□□□ 0.21
LINC00475-206ENST00000434944 UBAP1LF5GYI3 381 aa16.32■□□□□ 0.2
LINC00475-206ENST00000434944 ESF1Q9H501 851 aaKnown RBP16.32■□□□□ 0.2
LINC00475-206ENST00000434944 CAMSAP1Q5T5Y3 1602 aa16.31■□□□□ 0.2
LINC00475-206ENST00000434944 ZNF335Q9H4Z2 1342 aaPredicted RBP16.31■□□□□ 0.2
LINC00475-206ENST00000434944 CDC42BPBQ9Y5S2 1711 aa16.31■□□□□ 0.2
LINC00475-206ENST00000434944 NCKAP5LQ9HCH0 1330 aa16.3■□□□□ 0.2
LINC00475-206ENST00000434944 AGLP35573 1532 aa16.29■□□□□ 0.2
LINC00475-206ENST00000434944 MLH3Q9UHC1 1453 aa16.29■□□□□ 0.2
LINC00475-206ENST00000434944 TROQ12816 1431 aaPredicted RBP16.28■□□□□ 0.2
LINC00475-206ENST00000434944 EEA1Q15075 1411 aa16.28■□□□□ 0.2
LINC00475-206ENST00000434944 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
LINC00475-206ENST00000434944 CDK11AQ9UQ88 783 aaPredicted RBP16.28■□□□□ 0.2
LINC00475-206ENST00000434944 LRRIQ1Q96JM4 1722 aa16.27■□□□□ 0.19
LINC00475-206ENST00000434944 KIDINS220Q9ULH0 1771 aa16.26■□□□□ 0.19
LINC00475-206ENST00000434944 FMN1Q68DA7 1419 aa16.25■□□□□ 0.19
LINC00475-206ENST00000434944 ITSN2Q9NZM3 1697 aa16.24■□□□□ 0.19
LINC00475-206ENST00000434944 CNTLNQ9NXG0 1405 aa16.24■□□□□ 0.19
LINC00475-206ENST00000434944 ABCC1P33527 1531 aa16.24■□□□□ 0.19
LINC00475-206ENST00000434944 ARHGAP35Q9NRY4 1499 aa16.23■□□□□ 0.19
LINC00475-206ENST00000434944 CLIP1P30622 1438 aa16.22■□□□□ 0.19
LINC00475-206ENST00000434944 ZMYM3Q14202 1370 aa16.22■□□□□ 0.19
LINC00475-206ENST00000434944 PREX2Q70Z35 1606 aa16.22■□□□□ 0.19
LINC00475-206ENST00000434944 MROH2AA6NES4 1674 aa16.21■□□□□ 0.19
LINC00475-206ENST00000434944 NPATQ14207 1427 aa16.21■□□□□ 0.19
LINC00475-206ENST00000434944 SUPT6HQ7KZ85 1726 aaKnown RBP16.2■□□□□ 0.18
LINC00475-206ENST00000434944 UBTFP17480 764 aaKnown RBP16.19■□□□□ 0.18
LINC00475-206ENST00000434944 HSPA1LP34931 641 aa16.19■□□□□ 0.18
LINC00475-206ENST00000434944 FOXD1Q16676 465 aa16.19■□□□□ 0.18
LINC00475-206ENST00000434944 CLTCQ00610 1675 aaKnown RBP16.18■□□□□ 0.18
LINC00475-206ENST00000434944 MED1Q15648 1581 aaPredicted RBP16.18■□□□□ 0.18
LINC00475-206ENST00000434944 MYO3AQ8NEV4 1616 aa16.18■□□□□ 0.18
LINC00475-206ENST00000434944 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
LINC00475-206ENST00000434944 CDC42BPAQ5VT25 1732 aa16.17■□□□□ 0.18
LINC00475-206ENST00000434944 PKD2Q13563 968 aa16.17■□□□□ 0.18
LINC00475-206ENST00000434944 ZNF142P52746 1687 aaPredicted RBP16.17■□□□□ 0.18
LINC00475-206ENST00000434944 TCOF1Q13428 1488 aaKnown RBP16.16■□□□□ 0.18
LINC00475-206ENST00000434944 PIP4K2BP78356 416 aa16.16■□□□□ 0.18
LINC00475-206ENST00000434944 SAMD9LQ8IVG5 1584 aa16.16■□□□□ 0.18
LINC00475-206ENST00000434944 CEP170BQ9Y4F5 1589 aaPredicted RBP16.16■□□□□ 0.18
LINC00475-206ENST00000434944 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
LINC00475-206ENST00000434944 PTPRKQ15262 1439 aa16.14■□□□□ 0.17
LINC00475-206ENST00000434944 ZNF777Q9ULD5 760 aaPredicted RBP16.14■□□□□ 0.17
LINC00475-206ENST00000434944 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
LINC00475-206ENST00000434944 SYCP2Q9BX26 1530 aa16.11■□□□□ 0.17
LINC00475-206ENST00000434944 HNRNPMP52272 730 aaKnown RBP eCLIP16.11■□□□□ 0.17
LINC00475-206ENST00000434944 SPAG9O60271 1321 aaKnown RBP16.11■□□□□ 0.17
LINC00475-206ENST00000434944 GGT6Q6P531 493 aa16.1■□□□□ 0.17
LINC00475-206ENST00000434944 ATP7AQ04656 1500 aa16.08■□□□□ 0.16
LINC00475-206ENST00000434944 PLXNC1O60486 1568 aa16.08■□□□□ 0.16
LINC00475-206ENST00000434944 TOM1O60784 492 aa16.07■□□□□ 0.16
LINC00475-206ENST00000434944 A2MP01023 1474 aa16.07■□□□□ 0.16
LINC00475-206ENST00000434944 DNMT1P26358 1616 aaKnown RBP16.07■□□□□ 0.16
LINC00475-206ENST00000434944 A2ML1A8K2U0 1454 aa16.05■□□□□ 0.16
LINC00475-206ENST00000434944 NEURL4Q96JN8 1562 aa16.04■□□□□ 0.16
LINC00475-206ENST00000434944 INO80Q9ULG1 1556 aaPredicted RBP16.04■□□□□ 0.16
LINC00475-206ENST00000434944 GPATCH8Q9UKJ3 1502 aaKnown RBP16.04■□□□□ 0.16
LINC00475-206ENST00000434944 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
LINC00475-206ENST00000434944 CASKIN1Q8WXD9 1431 aa16.04■□□□□ 0.16
LINC00475-206ENST00000434944 POLR1AO95602 1720 aaPredicted RBP16.04■□□□□ 0.16
LINC00475-206ENST00000434944 SHANK2Q9UPX8 1470 aa16.03■□□□□ 0.16
LINC00475-206ENST00000434944 ALKQ9UM73 1620 aa16.03■□□□□ 0.16
LINC00475-206ENST00000434944 CPS1P31327 1500 aa16.03■□□□□ 0.16
LINC00475-206ENST00000434944 FBXO31Q5XUX0 539 aaPredicted RBP16.01■□□□□ 0.15
LINC00475-206ENST00000434944 VWDEQ8N2E2 1590 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms