RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.22□□□□□ -0.45
GTF2A1-202ENST00000434192 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.45
GTF2A1-202ENST00000434192 C3orf67Q6ZVT6 689 aa12.21□□□□□ -0.45
GTF2A1-202ENST00000434192 G3V3G9 751 aa12.2□□□□□ -0.46
GTF2A1-202ENST00000434192 SUPT5HO00267 1087 aaKnown RBP12.2□□□□□ -0.46
GTF2A1-202ENST00000434192 BOLA1Q9Y3E2 137 aa12.19□□□□□ -0.46
GTF2A1-202ENST00000434192 PRDM2Q13029 1718 aa12.19□□□□□ -0.46
GTF2A1-202ENST00000434192 KIF21AQ7Z4S6 1674 aa12.19□□□□□ -0.46
GTF2A1-202ENST00000434192 LAMC3Q9Y6N6 1575 aa12.18□□□□□ -0.46
GTF2A1-202ENST00000434192 MS4A4AQ96JQ5 239 aa12.18□□□□□ -0.46
GTF2A1-202ENST00000434192 CHGAP10645 457 aaKnown RBP12.16□□□□□ -0.46
GTF2A1-202ENST00000434192 NLRP6P59044 892 aa12.16□□□□□ -0.46
GTF2A1-202ENST00000434192 MFRPQ9BY79 579 aa12.15□□□□□ -0.46
GTF2A1-202ENST00000434192 FAM163AQ96GL9 167 aaPredicted RBP12.14□□□□□ -0.47
GTF2A1-202ENST00000434192 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
GTF2A1-202ENST00000434192 HS6ST3Q8IZP7 471 aa12.12□□□□□ -0.47
GTF2A1-202ENST00000434192 THOC2Q8NI27 1593 aaKnown RBP12.12□□□□□ -0.47
GTF2A1-202ENST00000434192 NESP48681 1621 aa12.11□□□□□ -0.47
GTF2A1-202ENST00000434192 ERCC6Q03468 1493 aa12.1□□□□□ -0.47
GTF2A1-202ENST00000434192 MICALL2Q8IY33 904 aa12.09□□□□□ -0.47
GTF2A1-202ENST00000434192 TMEM121BQ9BXQ6 578 aaPredicted RBP12.08□□□□□ -0.48
GTF2A1-202ENST00000434192 CUX2O14529 1486 aa12.07□□□□□ -0.48
GTF2A1-202ENST00000434192 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
GTF2A1-202ENST00000434192 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
GTF2A1-202ENST00000434192 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
GTF2A1-202ENST00000434192 POTEMA6NI47 508 aa11.99□□□□□ -0.49
GTF2A1-202ENST00000434192 SNPHO15079 494 aa11.99□□□□□ -0.49
GTF2A1-202ENST00000434192 PPP1R37O75864 691 aa11.99□□□□□ -0.49
GTF2A1-202ENST00000434192 POTEGQ6S5H5 508 aa11.99□□□□□ -0.49
GTF2A1-202ENST00000434192 TMEM92Q6UXU6 159 aa11.99□□□□□ -0.49
GTF2A1-202ENST00000434192 CCDC88BA6NC98 1476 aa11.98□□□□□ -0.49
GTF2A1-202ENST00000434192 ST18O60284 1047 aa11.98□□□□□ -0.49
GTF2A1-202ENST00000434192 NKX1-1Q15270 411 aaPredicted RBP11.98□□□□□ -0.49
GTF2A1-202ENST00000434192 PDS5BQ9NTI5 1447 aa11.96□□□□□ -0.49
GTF2A1-202ENST00000434192 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
GTF2A1-202ENST00000434192 WDR62O43379 1518 aa11.94□□□□□ -0.5
GTF2A1-202ENST00000434192 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
GTF2A1-202ENST00000434192 CFTRP13569 1480 aa11.92□□□□□ -0.5
GTF2A1-202ENST00000434192 MRC2Q9UBG0 1479 aa11.91□□□□□ -0.5
GTF2A1-202ENST00000434192 CEP164Q9UPV0 1460 aa11.9□□□□□ -0.5
GTF2A1-202ENST00000434192 HOXB3P14651 431 aaPredicted RBP11.88□□□□□ -0.51
GTF2A1-202ENST00000434192 FANCD2Q9BXW9 1451 aa11.87□□□□□ -0.51
GTF2A1-202ENST00000434192 MARVELD3Q96A59 401 aa11.86□□□□□ -0.51
GTF2A1-202ENST00000434192 C2orf72A6NCS6 295 aa11.85□□□□□ -0.51
GTF2A1-202ENST00000434192 RYDENQ9NUL5 291 aaKnown RBP11.85□□□□□ -0.51
GTF2A1-202ENST00000434192 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
GTF2A1-202ENST00000434192 ZNF710Q8N1W2 664 aa11.84□□□□□ -0.51
GTF2A1-202ENST00000434192 GTPBP6O43824 516 aaPredicted RBP11.83□□□□□ -0.52
GTF2A1-202ENST00000434192 TMC2Q8TDI7 906 aa11.83□□□□□ -0.52
GTF2A1-202ENST00000434192 KIF3CO14782 793 aa11.81□□□□□ -0.52
GTF2A1-202ENST00000434192 URB2Q14146 1524 aaKnown RBP11.79□□□□□ -0.52
GTF2A1-202ENST00000434192 RIMBP2O15034 1052 aa11.78□□□□□ -0.52
GTF2A1-202ENST00000434192 EMP3P54852 163 aa11.78□□□□□ -0.52
GTF2A1-202ENST00000434192 HOXB1P14653 301 aaPredicted RBP11.74□□□□□ -0.53
GTF2A1-202ENST00000434192 DNMBPQ6XZF7 1577 aa11.74□□□□□ -0.53
GTF2A1-202ENST00000434192 FAM205CA6NFA0 338 aa11.73□□□□□ -0.53
GTF2A1-202ENST00000434192 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
GTF2A1-202ENST00000434192 BBXQ8WY36 941 aaPredicted RBP11.73□□□□□ -0.53
GTF2A1-202ENST00000434192 PCDH10Q9P2E7 1040 aa11.72□□□□□ -0.53
GTF2A1-202ENST00000434192 ABCC8Q09428 1581 aa11.71□□□□□ -0.53
GTF2A1-202ENST00000434192 ARSIQ5FYB1 569 aa11.71□□□□□ -0.53
GTF2A1-202ENST00000434192 GPHNQ9NQX3 736 aaPredicted RBP11.71□□□□□ -0.53
GTF2A1-202ENST00000434192 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
GTF2A1-202ENST00000434192 GPR153Q6NV75 609 aa11.7□□□□□ -0.54
GTF2A1-202ENST00000434192 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
GTF2A1-202ENST00000434192 KHSRPQ92945 711 aaKnown RBP eCLIP11.69□□□□□ -0.543e-7■■■■□ 19.4
GTF2A1-202ENST00000434192 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
GTF2A1-202ENST00000434192 POTEB3A0JP26 581 aa11.68□□□□□ -0.54
GTF2A1-202ENST00000434192 POTEBQ6S5H4 581 aa11.68□□□□□ -0.54
GTF2A1-202ENST00000434192 HS3ST6Q96QI5 342 aa11.68□□□□□ -0.54
GTF2A1-202ENST00000434192 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
GTF2A1-202ENST00000434192 FOXK1P85037 733 aa11.67□□□□□ -0.54
GTF2A1-202ENST00000434192 DSG2Q14126 1118 aa11.67□□□□□ -0.54
GTF2A1-202ENST00000434192 PLPP6Q8IY26 295 aa11.67□□□□□ -0.54
GTF2A1-202ENST00000434192 WDR97A6NE52 1622 aa11.67□□□□□ -0.54
GTF2A1-202ENST00000434192 TARBP1Q13395 1621 aaKnown RBP11.67□□□□□ -0.54
GTF2A1-202ENST00000434192 ERBB3P21860 1342 aa11.66□□□□□ -0.54
GTF2A1-202ENST00000434192 PLSCR2Q9NRY7 297 aa11.66□□□□□ -0.54
GTF2A1-202ENST00000434192 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
GTF2A1-202ENST00000434192 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
GTF2A1-202ENST00000434192 TOP2BQ02880 1626 aa11.64□□□□□ -0.55
GTF2A1-202ENST00000434192 WRNQ14191 1432 aaPredicted RBP eCLIP11.64□□□□□ -0.55
GTF2A1-202ENST00000434192 CRISPLD2Q9H0B8 497 aa11.64□□□□□ -0.55
GTF2A1-202ENST00000434192 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
GTF2A1-202ENST00000434192 CHD1O14646 1710 aa11.63□□□□□ -0.55
GTF2A1-202ENST00000434192 NCKAP5LQ9HCH0 1330 aa11.63□□□□□ -0.55
GTF2A1-202ENST00000434192 SLC34A2O95436 690 aa11.62□□□□□ -0.55
GTF2A1-202ENST00000434192 PDE4AP27815 886 aa11.62□□□□□ -0.55
GTF2A1-202ENST00000434192 PCDHGA4Q9Y5G9 962 aa11.62□□□□□ -0.55
GTF2A1-202ENST00000434192 NUDT7P0C024 238 aa11.61□□□□□ -0.55
GTF2A1-202ENST00000434192 VARS2Q5ST30 1063 aaKnown RBP11.61□□□□□ -0.55
GTF2A1-202ENST00000434192 CADPS2Q86UW7 1296 aa11.61□□□□□ -0.55
GTF2A1-202ENST00000434192 SPRYD3Q8NCJ5 442 aa11.61□□□□□ -0.55
GTF2A1-202ENST00000434192 CUX1P39880 1505 aa11.6□□□□□ -0.55
GTF2A1-202ENST00000434192 PBRM1Q86U86 1689 aa11.6□□□□□ -0.55
GTF2A1-202ENST00000434192 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
GTF2A1-202ENST00000434192 PAXIP1Q6ZW49 1069 aaPredicted RBP11.59□□□□□ -0.55
GTF2A1-202ENST00000434192 LARP6Q9BRS8 491 aaKnown RBP11.59□□□□□ -0.55
GTF2A1-202ENST00000434192 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
GTF2A1-202ENST00000434192 PPP1R15BQ5SWA1 713 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms