RNA–Protein interactions for RNA: ENST00000433298.5

LRCH3-205, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-205ENST00000433298 SIGLEC1Q9BZZ2 1709 aa13.14□□□□□ -0.31
LRCH3-205ENST00000433298 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
LRCH3-205ENST00000433298 FER1L4A9Z1Z3 1794 aa13.13□□□□□ -0.31
LRCH3-205ENST00000433298 POGZQ7Z3K3 1410 aa13.11□□□□□ -0.31
LRCH3-205ENST00000433298 PREX1Q8TCU6 1659 aa13.11□□□□□ -0.31
LRCH3-205ENST00000433298 FANCAO15360 1455 aa13.1□□□□□ -0.31
LRCH3-205ENST00000433298 ABCA9Q8IUA7 1624 aa13.1□□□□□ -0.31
LRCH3-205ENST00000433298 PHLDB1Q86UU1 1377 aa13.09□□□□□ -0.31
LRCH3-205ENST00000433298 P3H3Q8IVL6 736 aa13.09□□□□□ -0.31
LRCH3-205ENST00000433298 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
LRCH3-205ENST00000433298 NEO1Q92859 1461 aa13.09□□□□□ -0.31
LRCH3-205ENST00000433298 UBAP1LF5GYI3 381 aa13.08□□□□□ -0.32
LRCH3-205ENST00000433298 AKNAQ7Z591 1439 aa13.07□□□□□ -0.32
LRCH3-205ENST00000433298 TTC37Q6PGP7 1564 aa13.07□□□□□ -0.32
LRCH3-205ENST00000433298 DENND4BO75064 1496 aaPredicted RBP13.06□□□□□ -0.32
LRCH3-205ENST00000433298 ATP10BO94823 1461 aa13.06□□□□□ -0.32
LRCH3-205ENST00000433298 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
LRCH3-205ENST00000433298 LTBP4Q8N2S1 1624 aa13.06□□□□□ -0.32
LRCH3-205ENST00000433298 RICTORQ6R327 1708 aa13.05□□□□□ -0.32
LRCH3-205ENST00000433298 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
LRCH3-205ENST00000433298 ZFYVE16Q7Z3T8 1539 aa13.04□□□□□ -0.32
LRCH3-205ENST00000433298 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
LRCH3-205ENST00000433298 UHRF1BP1Q6BDS2 1440 aa13.04□□□□□ -0.32
LRCH3-205ENST00000433298 MED1Q15648 1581 aaPredicted RBP13.03□□□□□ -0.32
LRCH3-205ENST00000433298 GOLGA3Q08378 1498 aa13.02□□□□□ -0.33
LRCH3-205ENST00000433298 CTTNBP2Q8WZ74 1663 aa13.02□□□□□ -0.33
LRCH3-205ENST00000433298 PTPRTO14522 1441 aa13□□□□□ -0.33
LRCH3-205ENST00000433298 DSG3P32926 999 aa12.99□□□□□ -0.33
LRCH3-205ENST00000433298 PIP4K2BP78356 416 aa12.99□□□□□ -0.33
LRCH3-205ENST00000433298 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
LRCH3-205ENST00000433298 EFCAB5A4FU69 1503 aa12.98□□□□□ -0.33
LRCH3-205ENST00000433298 HSPA1LP34931 641 aa12.98□□□□□ -0.33
LRCH3-205ENST00000433298 FHOD3Q2V2M9 1422 aa12.97□□□□□ -0.33
LRCH3-205ENST00000433298 ZNF335Q9H4Z2 1342 aaPredicted RBP12.97□□□□□ -0.33
LRCH3-205ENST00000433298 HECW1Q76N89 1606 aa12.97□□□□□ -0.33
LRCH3-205ENST00000433298 ARHGEF12Q9NZN5 1544 aa12.97□□□□□ -0.33
LRCH3-205ENST00000433298 IQSEC2Q5JU85 1478 aa12.97□□□□□ -0.33
LRCH3-205ENST00000433298 FAM9AQ8IZU1 332 aaPredicted RBP12.96□□□□□ -0.33
LRCH3-205ENST00000433298 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
LRCH3-205ENST00000433298 ZMYM4Q5VZL5 1548 aa12.94□□□□□ -0.34
LRCH3-205ENST00000433298 NCKAP5LQ9HCH0 1330 aa12.92□□□□□ -0.34
LRCH3-205ENST00000433298 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
LRCH3-205ENST00000433298 RANGAP1P46060 587 aaPredicted RBP12.91□□□□□ -0.34
LRCH3-205ENST00000433298 CFAP74Q9C0B2 1584 aa12.9□□□□□ -0.34
LRCH3-205ENST00000433298 NCOA1Q15788 1441 aa12.9□□□□□ -0.34
LRCH3-205ENST00000433298 C9orf84Q5VXU9 1444 aa12.9□□□□□ -0.34
LRCH3-205ENST00000433298 RAPGEF6Q8TEU7 1601 aa12.9□□□□□ -0.34
LRCH3-205ENST00000433298 ATP10AO60312 1499 aa12.9□□□□□ -0.34
LRCH3-205ENST00000433298 C3P01024 1663 aa12.89□□□□□ -0.35
LRCH3-205ENST00000433298 MAGI2Q86UL8 1455 aa12.89□□□□□ -0.35
LRCH3-205ENST00000433298 SETD1BQ9UPS6 1966 aaKnown RBP12.89□□□□□ -0.35
LRCH3-205ENST00000433298 SCAPERQ9BY12 1400 aa12.88□□□□□ -0.35
LRCH3-205ENST00000433298 CAMSAP1Q5T5Y3 1602 aa12.88□□□□□ -0.35
LRCH3-205ENST00000433298 PLEKHD1A6NEE1 506 aa12.87□□□□□ -0.35
LRCH3-205ENST00000433298 ESF1Q9H501 851 aaKnown RBP12.87□□□□□ -0.35
LRCH3-205ENST00000433298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.87□□□□□ -0.35
LRCH3-205ENST00000433298 FOXD4L1Q9NU39 408 aa12.85□□□□□ -0.35
LRCH3-205ENST00000433298 NUP153P49790 1475 aaKnown RBP12.85□□□□□ -0.35
LRCH3-205ENST00000433298 TRAPPC8Q9Y2L5 1435 aa12.82□□□□□ -0.36
LRCH3-205ENST00000433298 TOM1O60784 492 aa12.79□□□□□ -0.36
LRCH3-205ENST00000433298 ABCB7O75027 752 aa12.79□□□□□ -0.36
LRCH3-205ENST00000433298 AFAP1Q8N556 730 aa12.79□□□□□ -0.36
LRCH3-205ENST00000433298 SUPT6HQ7KZ85 1726 aaKnown RBP12.76□□□□□ -0.37
LRCH3-205ENST00000433298 RGS17Q9UGC6 210 aaPredicted RBP12.76□□□□□ -0.37
LRCH3-205ENST00000433298 SAMD9Q5K651 1589 aa12.75□□□□□ -0.37
LRCH3-205ENST00000433298 DIP2CQ9Y2E4 1556 aa12.75□□□□□ -0.37
LRCH3-205ENST00000433298 PLCH2O75038 1416 aa12.74□□□□□ -0.37
LRCH3-205ENST00000433298 ABCA6Q8N139 1617 aa12.73□□□□□ -0.37
LRCH3-205ENST00000433298 CDK13Q14004 1512 aaKnown RBP12.72□□□□□ -0.37
LRCH3-205ENST00000433298 PKD2Q13563 968 aa12.72□□□□□ -0.37
LRCH3-205ENST00000433298 EFCAB2Q5VUJ9 269 aa12.72□□□□□ -0.37
LRCH3-205ENST00000433298 ATP1B4Q9UN42 357 aaPredicted RBP12.71□□□□□ -0.37
LRCH3-205ENST00000433298 ZNF518AQ6AHZ1 1483 aa12.71□□□□□ -0.38
LRCH3-205ENST00000433298 PRXQ9BXM0 1461 aa12.71□□□□□ -0.38
LRCH3-205ENST00000433298 SETD1AO15047 1707 aaKnown RBP12.7□□□□□ -0.38
LRCH3-205ENST00000433298 MYO5CQ9NQX4 1742 aa12.69□□□□□ -0.38
LRCH3-205ENST00000433298 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
LRCH3-205ENST00000433298 MYO3AQ8NEV4 1616 aa12.69□□□□□ -0.38
LRCH3-205ENST00000433298 ZMYM3Q14202 1370 aa12.68□□□□□ -0.38
LRCH3-205ENST00000433298 ARHGAP5Q13017 1502 aa12.67□□□□□ -0.38
LRCH3-205ENST00000433298 TCOF1Q13428 1488 aaKnown RBP12.67□□□□□ -0.38
LRCH3-205ENST00000433298 KDM5CP41229 1560 aa12.67□□□□□ -0.38
LRCH3-205ENST00000433298 CEP170BQ9Y4F5 1589 aaPredicted RBP12.66□□□□□ -0.38
LRCH3-205ENST00000433298 CNTLNQ9NXG0 1405 aa12.66□□□□□ -0.38
LRCH3-205ENST00000433298 ALKQ9UM73 1620 aa12.66□□□□□ -0.38
LRCH3-205ENST00000433298 PLA2R1Q13018 1463 aa12.65□□□□□ -0.38
LRCH3-205ENST00000433298 NPATQ14207 1427 aa12.65□□□□□ -0.38
LRCH3-205ENST00000433298 AGLP35573 1532 aa12.65□□□□□ -0.38
LRCH3-205ENST00000433298 SHANK2Q9UPX8 1470 aa12.65□□□□□ -0.38
LRCH3-205ENST00000433298 REREQ9P2R6 1566 aa12.64□□□□□ -0.39
LRCH3-205ENST00000433298 ZNF142P52746 1687 aaPredicted RBP12.64□□□□□ -0.39
LRCH3-205ENST00000433298 CLTCQ00610 1675 aaKnown RBP12.64□□□□□ -0.39
LRCH3-205ENST00000433298 CPS1P31327 1500 aa12.64□□□□□ -0.39
LRCH3-205ENST00000433298 KIF14Q15058 1648 aa12.64□□□□□ -0.39
LRCH3-205ENST00000433298 PTPRKQ15262 1439 aa12.63□□□□□ -0.39
LRCH3-205ENST00000433298 MROH2AA6NES4 1674 aa12.61□□□□□ -0.39
LRCH3-205ENST00000433298 POLA2Q14181 598 aa12.61□□□□□ -0.39
LRCH3-205ENST00000433298 MLH3Q9UHC1 1453 aa12.59□□□□□ -0.39
LRCH3-205ENST00000433298 KIDINS220Q9ULH0 1771 aa12.58□□□□□ -0.39
LRCH3-205ENST00000433298 POLR1AO95602 1720 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms