RNA–Protein interactions for RNA: ENST00000432641.2

SDHAF3-202, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHAF3, Length 2,060 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-202ENST00000432641 RRP7BPQ9NSQ0 103 aa29.36■■■□□ 2.29
SDHAF3-202ENST00000432641 CAMSAP2Q08AD1 1489 aa29.35■■■□□ 2.29
SDHAF3-202ENST00000432641 PLEKHD1A6NEE1 506 aa29.35■■■□□ 2.29
SDHAF3-202ENST00000432641 CHIC2Q9UKJ5 165 aa29.35■■■□□ 2.29
SDHAF3-202ENST00000432641 CFDP1Q9UEE9 299 aaPredicted RBP29.32■■■□□ 2.28
SDHAF3-202ENST00000432641 TONSLQ96HA7 1378 aa29.32■■■□□ 2.28
SDHAF3-202ENST00000432641 ADGBQ8N7X0 1667 aa29.32■■■□□ 2.28
SDHAF3-202ENST00000432641 PPP1R15AO75807 674 aaPredicted RBP29.3■■■□□ 2.28
SDHAF3-202ENST00000432641 MIER1Q8N108 512 aa29.3■■■□□ 2.28
SDHAF3-202ENST00000432641 CROCC2H7BZ55 1655 aa29.28■■■□□ 2.28
SDHAF3-202ENST00000432641 ABCC10Q5T3U5 1492 aa29.28■■■□□ 2.28
SDHAF3-202ENST00000432641 KDM6BO15054 1643 aa29.27■■■□□ 2.28
SDHAF3-202ENST00000432641 CDC42BPAQ5VT25 1732 aa29.27■■■□□ 2.28
SDHAF3-202ENST00000432641 ADGRL2O95490 1459 aa29.26■■■□□ 2.27
SDHAF3-202ENST00000432641 ZNF644Q9H582 1327 aaPredicted RBP29.23■■■□□ 2.27
SDHAF3-202ENST00000432641 TRIM52Q96A61 297 aa29.21■■■□□ 2.27
SDHAF3-202ENST00000432641 SHANK2Q9UPX8 1470 aa29.19■■■□□ 2.26
SDHAF3-202ENST00000432641 DENND4BO75064 1496 aaPredicted RBP29.19■■■□□ 2.26
SDHAF3-202ENST00000432641 MPHOSPH9Q99550 1183 aa29.17■■■□□ 2.26
SDHAF3-202ENST00000432641 NCOA1Q15788 1441 aa29.17■■■□□ 2.26
SDHAF3-202ENST00000432641 CLASP1Q7Z460 1538 aa29.16■■■□□ 2.26
SDHAF3-202ENST00000432641 ABCC2Q92887 1545 aa29.13■■■□□ 2.25
SDHAF3-202ENST00000432641 ANKRD30AQ9BXX3 1397 aa29.13■■■□□ 2.25
SDHAF3-202ENST00000432641 ARHGEF5Q12774 1597 aa29.11■■■□□ 2.25
SDHAF3-202ENST00000432641 PREX2Q70Z35 1606 aa29.09■■■□□ 2.25
SDHAF3-202ENST00000432641 KDM5BQ9UGL1 1544 aa29.08■■■□□ 2.25
SDHAF3-202ENST00000432641 ZNF777Q9ULD5 760 aaPredicted RBP29.08■■■□□ 2.25
SDHAF3-202ENST00000432641 UHRF1BP1LA0JNW5 1464 aa29.03■■■□□ 2.24
SDHAF3-202ENST00000432641 ANKRD30BQ9BXX2 1392 aa29.02■■■□□ 2.24
SDHAF3-202ENST00000432641 ERCC6L2Q5T890 1561 aa29.02■■■□□ 2.24
SDHAF3-202ENST00000432641 C9orf84Q5VXU9 1444 aa29.02■■■□□ 2.24
SDHAF3-202ENST00000432641 RSPH4AQ5TD94 716 aa29.01■■■□□ 2.24
SDHAF3-202ENST00000432641 CDC42BPBQ9Y5S2 1711 aa29.01■■■□□ 2.23
SDHAF3-202ENST00000432641 RPRD2Q5VT52 1461 aaKnown RBP29■■■□□ 2.23
SDHAF3-202ENST00000432641 MYT1Q01538 1121 aa29■■■□□ 2.23
SDHAF3-202ENST00000432641 PZPP20742 1482 aa28.98■■■□□ 2.23
SDHAF3-202ENST00000432641 ANKRD50Q9ULJ7 1429 aa28.98■■■□□ 2.23
SDHAF3-202ENST00000432641 SLC4A1APQ9BWU0 796 aaKnown RBP28.97■■■□□ 2.23
SDHAF3-202ENST00000432641 TSPY4P0CV99 314 aa28.97■■■□□ 2.23
SDHAF3-202ENST00000432641 TSPY10P0CW01 314 aa28.97■■■□□ 2.23
SDHAF3-202ENST00000432641 SAMD9LQ8IVG5 1584 aa28.96■■■□□ 2.23
SDHAF3-202ENST00000432641 CCDC141Q6ZP82 1450 aa28.96■■■□□ 2.23
SDHAF3-202ENST00000432641 MBD5Q9P267 1494 aa28.96■■■□□ 2.23
SDHAF3-202ENST00000432641 MYO5CQ9NQX4 1742 aa28.93■■■□□ 2.22
SDHAF3-202ENST00000432641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.93■■■□□ 2.221e-6■□□□□ 10.6
SDHAF3-202ENST00000432641 PLEKHH2Q8IVE3 1493 aa28.93■■■□□ 2.22
SDHAF3-202ENST00000432641 KDM5DQ9BY66 1539 aa28.92■■■□□ 2.22
SDHAF3-202ENST00000432641 TTC37Q6PGP7 1564 aa28.91■■■□□ 2.22
SDHAF3-202ENST00000432641 MAST1Q9Y2H9 1570 aa28.9■■■□□ 2.22
SDHAF3-202ENST00000432641 YTHDC1Q96MU7 727 aaKnown RBP28.9■■■□□ 2.22
SDHAF3-202ENST00000432641 ZCCHC11Q5TAX3 1644 aaKnown RBP28.9■■■□□ 2.22
SDHAF3-202ENST00000432641 KIAA1107Q9UPP5 1409 aa28.9■■■□□ 2.22
SDHAF3-202ENST00000432641 ARHGAP5Q13017 1502 aa28.88■■■□□ 2.21
SDHAF3-202ENST00000432641 TEX14Q8IWB6 1497 aa28.86■■■□□ 2.21
SDHAF3-202ENST00000432641 KIF15Q9NS87 1388 aa28.84■■■□□ 2.21
SDHAF3-202ENST00000432641 L3MBTL2Q969R5 705 aa28.82■■■□□ 2.2
SDHAF3-202ENST00000432641 HNRNPMP52272 730 aaKnown RBP eCLIP28.82■■■□□ 2.24e-6■■■□□ 18.7
SDHAF3-202ENST00000432641 FOXD1Q16676 465 aa28.82■■■□□ 2.2
SDHAF3-202ENST00000432641 DDX10Q13206 875 aaKnown RBP28.81■■■□□ 2.2
SDHAF3-202ENST00000432641 GTF3C3Q9Y5Q9 886 aa28.8■■■□□ 2.2
SDHAF3-202ENST00000432641 SYCP2Q9BX26 1530 aa28.8■■■□□ 2.2
SDHAF3-202ENST00000432641 PLXNC1O60486 1568 aa28.77■■■□□ 2.2
SDHAF3-202ENST00000432641 PLCH2O75038 1416 aa28.76■■■□□ 2.2
SDHAF3-202ENST00000432641 NUP155O75694 1391 aa28.76■■■□□ 2.19
SDHAF3-202ENST00000432641 ARAP3Q8WWN8 1544 aa28.75■■■□□ 2.19
SDHAF3-202ENST00000432641 EIF4G2P78344 907 aaKnown RBP eCLIP28.74■■■□□ 2.19
SDHAF3-202ENST00000432641 PKD2Q13563 968 aa28.73■■■□□ 2.19
SDHAF3-202ENST00000432641 HIRIP3Q9BW71 556 aaPredicted RBP28.7■■■□□ 2.18
SDHAF3-202ENST00000432641 UNC13BO14795 1591 aa28.68■■■□□ 2.18
SDHAF3-202ENST00000432641 EFCAB2Q5VUJ9 269 aa28.68■■■□□ 2.18
SDHAF3-202ENST00000432641 HSPA5P11021 654 aaKnown RBP28.67■■■□□ 2.18
SDHAF3-202ENST00000432641 CCER2I3L3R5 266 aa28.66■■■□□ 2.18
SDHAF3-202ENST00000432641 ANP32CO43423 234 aa28.65■■■□□ 2.18
SDHAF3-202ENST00000432641 ABCC1P33527 1531 aa28.65■■■□□ 2.18
SDHAF3-202ENST00000432641 ARHGEF12Q9NZN5 1544 aa28.65■■■□□ 2.18
SDHAF3-202ENST00000432641 DUOX2Q9NRD8 1548 aa28.64■■■□□ 2.18
SDHAF3-202ENST00000432641 KCNH8Q96L42 1107 aa28.64■■■□□ 2.18
SDHAF3-202ENST00000432641 FAM135AQ9P2D6 1515 aa28.63■■■□□ 2.17
SDHAF3-202ENST00000432641 WDR7Q9Y4E6 1490 aa28.61■■■□□ 2.17
SDHAF3-202ENST00000432641 ERBINQ96RT1 1412 aa28.6■■■□□ 2.17
SDHAF3-202ENST00000432641 NBPF8Q3BBV2 869 aa28.58■■■□□ 2.17
SDHAF3-202ENST00000432641 POLR1AO95602 1720 aaPredicted RBP28.58■■■□□ 2.17
SDHAF3-202ENST00000432641 UHRF1BP1Q6BDS2 1440 aa28.57■■■□□ 2.16
SDHAF3-202ENST00000432641 IQGAP3Q86VI3 1631 aa28.57■■■□□ 2.16
SDHAF3-202ENST00000432641 SPATA31E1Q6ZUB1 1445 aa28.55■■■□□ 2.16
SDHAF3-202ENST00000432641 ABCA9Q8IUA7 1624 aa28.54■■■□□ 2.16
SDHAF3-202ENST00000432641 MAGI2Q86UL8 1455 aa28.54■■■□□ 2.16
SDHAF3-202ENST00000432641 WASHC2AQ641Q2 1341 aa28.53■■■□□ 2.16
SDHAF3-202ENST00000432641 RTEL1-TNFRSF6BF6WH68 1400 aa28.53■■■□□ 2.16
SDHAF3-202ENST00000432641 RALGAPBQ86X10 1494 aa28.47■■■□□ 2.15
SDHAF3-202ENST00000432641 OSCARQ8IYS5 282 aa28.47■■■□□ 2.15
SDHAF3-202ENST00000432641 CNTLNQ9NXG0 1405 aa28.47■■■□□ 2.15
SDHAF3-202ENST00000432641 CCDC7Q96M83 1385 aa28.47■■■□□ 2.15
SDHAF3-202ENST00000432641 TRAPPC8Q9Y2L5 1435 aa28.45■■■□□ 2.15
SDHAF3-202ENST00000432641 ATP10AO60312 1499 aa28.43■■■□□ 2.14
SDHAF3-202ENST00000432641 CCDC144AA2RUR9 1427 aa28.42■■■□□ 2.14
SDHAF3-202ENST00000432641 ZFYVE16Q7Z3T8 1539 aa28.42■■■□□ 2.14
SDHAF3-202ENST00000432641 FANCAO15360 1455 aa28.41■■■□□ 2.14
SDHAF3-202ENST00000432641 SPAG9O60271 1321 aaKnown RBP28.4■■■□□ 2.14
SDHAF3-202ENST00000432641 KDM5CP41229 1560 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms