RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 HECW1Q76N89 1606 aa24.69■■□□□ 1.54
PTCD1-204ENST00000430982 ARHGEF12Q9NZN5 1544 aa24.68■■□□□ 1.54
PTCD1-204ENST00000430982 ARHGAP35Q9NRY4 1499 aa24.65■■□□□ 1.54
PTCD1-204ENST00000430982 PREX1Q8TCU6 1659 aa24.64■■□□□ 1.53
PTCD1-204ENST00000430982 PLCH2O75038 1416 aa24.61■■□□□ 1.53
PTCD1-204ENST00000430982 SCAPERQ9BY12 1400 aa24.59■■□□□ 1.53
PTCD1-204ENST00000430982 ATP10AO60312 1499 aa24.58■■□□□ 1.53
PTCD1-204ENST00000430982 C9orf84Q5VXU9 1444 aa24.58■■□□□ 1.53
PTCD1-204ENST00000430982 STRCQ7RTU9 1775 aa24.57■■□□□ 1.52
PTCD1-204ENST00000430982 CDK13Q14004 1512 aaKnown RBP24.56■■□□□ 1.52
PTCD1-204ENST00000430982 PLPPR3Q6T4P5 718 aa24.56■■□□□ 1.52
PTCD1-204ENST00000430982 FMN1Q68DA7 1419 aa24.55■■□□□ 1.52
PTCD1-204ENST00000430982 MLECQ14165 292 aa24.54■■□□□ 1.52
PTCD1-204ENST00000430982 CLIP1P30622 1438 aa24.53■■□□□ 1.52
PTCD1-204ENST00000430982 ATP1B4Q9UN42 357 aaPredicted RBP24.53■■□□□ 1.52
PTCD1-204ENST00000430982 LOC105371045A0A1W2PR82 267 aa24.5■■□□□ 1.51
PTCD1-204ENST00000430982 KDM5CP41229 1560 aa24.5■■□□□ 1.51
PTCD1-204ENST00000430982 MYO5CQ9NQX4 1742 aa24.49■■□□□ 1.51
PTCD1-204ENST00000430982 ILDR2Q71H61 639 aa24.49■■□□□ 1.51
PTCD1-204ENST00000430982 REREQ9P2R6 1566 aa24.47■■□□□ 1.51
PTCD1-204ENST00000430982 ZNF518AQ6AHZ1 1483 aa24.46■■□□□ 1.51
PTCD1-204ENST00000430982 DISP3Q9P2K9 1392 aa24.46■■□□□ 1.51
PTCD1-204ENST00000430982 SOCS7O14512 581 aa24.45■■□□□ 1.5
PTCD1-204ENST00000430982 DMRT2Q9Y5R5 561 aa24.45■■□□□ 1.5
PTCD1-204ENST00000430982 SETD1BQ9UPS6 1966 aaKnown RBP24.45■■□□□ 1.5
PTCD1-204ENST00000430982 UHRF1BP1Q6BDS2 1440 aa24.44■■□□□ 1.5
PTCD1-204ENST00000430982 CEBPAP49715 358 aaPredicted RBP24.44■■□□□ 1.5
PTCD1-204ENST00000430982 DIP2CQ9Y2E4 1556 aa24.42■■□□□ 1.5
PTCD1-204ENST00000430982 EFCAB2Q5VUJ9 269 aa24.42■■□□□ 1.5
PTCD1-204ENST00000430982 PTPRTO14522 1441 aa24.42■■□□□ 1.5
PTCD1-204ENST00000430982 KIF14Q15058 1648 aa24.41■■□□□ 1.5
PTCD1-204ENST00000430982 CEP162Q5TB80 1403 aa24.41■■□□□ 1.5
PTCD1-204ENST00000430982 SPATA31D1Q6ZQQ2 1576 aa24.38■■□□□ 1.49
PTCD1-204ENST00000430982 C3P01024 1663 aa24.38■■□□□ 1.49
PTCD1-204ENST00000430982 LTBP4Q8N2S1 1624 aa24.38■■□□□ 1.49
PTCD1-204ENST00000430982 AGLP35573 1532 aa24.36■■□□□ 1.49
PTCD1-204ENST00000430982 ABCA6Q8N139 1617 aa24.36■■□□□ 1.49
PTCD1-204ENST00000430982 IQSEC2Q5JU85 1478 aa24.36■■□□□ 1.49
PTCD1-204ENST00000430982 CASKIN1Q8WXD9 1431 aa24.35■■□□□ 1.49
PTCD1-204ENST00000430982 MLH3Q9UHC1 1453 aa24.35■■□□□ 1.49
PTCD1-204ENST00000430982 TROQ12816 1431 aaPredicted RBP24.34■■□□□ 1.49
PTCD1-204ENST00000430982 ARHGAP5Q13017 1502 aa24.33■■□□□ 1.49
PTCD1-204ENST00000430982 AFAP1Q8N556 730 aa24.32■■□□□ 1.48
PTCD1-204ENST00000430982 CDK11AQ9UQ88 783 aaPredicted RBP24.31■■□□□ 1.48
PTCD1-204ENST00000430982 CDC42BPBQ9Y5S2 1711 aa24.3■■□□□ 1.48
PTCD1-204ENST00000430982 NCOA1Q15788 1441 aa24.28■■□□□ 1.48
PTCD1-204ENST00000430982 TRAPPC8Q9Y2L5 1435 aa24.28■■□□□ 1.48
PTCD1-204ENST00000430982 FYCO1Q9BQS8 1478 aa24.28■■□□□ 1.48
PTCD1-204ENST00000430982 ABCC1P33527 1531 aa24.27■■□□□ 1.48
PTCD1-204ENST00000430982 LRRIQ1Q96JM4 1722 aa24.27■■□□□ 1.48
PTCD1-204ENST00000430982 CCDC18Q5T9S5 1454 aa24.26■■□□□ 1.47
PTCD1-204ENST00000430982 PREX2Q70Z35 1606 aa24.24■■□□□ 1.47
PTCD1-204ENST00000430982 CNTLNQ9NXG0 1405 aa24.23■■□□□ 1.47
PTCD1-204ENST00000430982 ITSN2Q9NZM3 1697 aa24.23■■□□□ 1.47
PTCD1-204ENST00000430982 KIDINS220Q9ULH0 1771 aa24.22■■□□□ 1.47
PTCD1-204ENST00000430982 MROH2AA6NES4 1674 aa24.2■■□□□ 1.46
PTCD1-204ENST00000430982 NPATQ14207 1427 aa24.18■■□□□ 1.46
PTCD1-204ENST00000430982 CAMSAP1Q5T5Y3 1602 aa24.16■■□□□ 1.46
PTCD1-204ENST00000430982 MYT1LQ9UL68 1186 aa24.13■■□□□ 1.45
PTCD1-204ENST00000430982 ZNF142P52746 1687 aaPredicted RBP24.11■■□□□ 1.45
PTCD1-204ENST00000430982 VPS8Q8N3P4 1428 aa24.11■■□□□ 1.45
PTCD1-204ENST00000430982 CDC42BPAQ5VT25 1732 aa24.11■■□□□ 1.45
PTCD1-204ENST00000430982 ESF1Q9H501 851 aaKnown RBP24.11■■□□□ 1.45
PTCD1-204ENST00000430982 SAMD9LQ8IVG5 1584 aa24.11■■□□□ 1.45
PTCD1-204ENST00000430982 PLA2R1Q13018 1463 aa24.09■■□□□ 1.45
PTCD1-204ENST00000430982 TCOF1Q13428 1488 aaKnown RBP24.07■■□□□ 1.44
PTCD1-204ENST00000430982 MYO3AQ8NEV4 1616 aa24.06■■□□□ 1.44
PTCD1-204ENST00000430982 ZMYM3Q14202 1370 aa24.06■■□□□ 1.44
PTCD1-204ENST00000430982 MTUS2Q5JR59 1369 aa24.06■■□□□ 1.44
PTCD1-204ENST00000430982 PLXNC1O60486 1568 aa24.06■■□□□ 1.44
PTCD1-204ENST00000430982 ZNF335Q9H4Z2 1342 aaPredicted RBP24.04■■□□□ 1.44
PTCD1-204ENST00000430982 CEP170BQ9Y4F5 1589 aaPredicted RBP24.02■■□□□ 1.44
PTCD1-204ENST00000430982 SYCP2Q9BX26 1530 aa24.01■■□□□ 1.43
PTCD1-204ENST00000430982 PTPRKQ15262 1439 aa24.01■■□□□ 1.43
PTCD1-204ENST00000430982 INO80Q9ULG1 1556 aaPredicted RBP24■■□□□ 1.43
PTCD1-204ENST00000430982 CLTCQ00610 1675 aaKnown RBP24■■□□□ 1.43
PTCD1-204ENST00000430982 NCKAP5LQ9HCH0 1330 aa24■■□□□ 1.43
PTCD1-204ENST00000430982 SUPT6HQ7KZ85 1726 aaKnown RBP23.99■■□□□ 1.43
PTCD1-204ENST00000430982 ATP7AQ04656 1500 aa23.99■■□□□ 1.43
PTCD1-204ENST00000430982 PKD2Q13563 968 aa23.98■■□□□ 1.43
PTCD1-204ENST00000430982 EHBP1L1Q8N3D4 1523 aa23.96■■□□□ 1.43
PTCD1-204ENST00000430982 GPATCH8Q9UKJ3 1502 aaKnown RBP23.96■■□□□ 1.43
PTCD1-204ENST00000430982 UBAP1LF5GYI3 381 aa23.96■■□□□ 1.43
PTCD1-204ENST00000430982 KIAA1107Q9UPP5 1409 aa23.94■■□□□ 1.42
PTCD1-204ENST00000430982 TIAM1Q13009 1591 aa23.94■■□□□ 1.42
PTCD1-204ENST00000430982 A2MP01023 1474 aa23.94■■□□□ 1.42
PTCD1-204ENST00000430982 SPAG9O60271 1321 aaKnown RBP23.93■■□□□ 1.42
PTCD1-204ENST00000430982 CCNB3Q8WWL7 1395 aa23.92■■□□□ 1.42
PTCD1-204ENST00000430982 PLEKHH2Q8IVE3 1493 aa23.9■■□□□ 1.42
PTCD1-204ENST00000430982 APLP2Q06481 763 aa23.9■■□□□ 1.42
PTCD1-204ENST00000430982 ZNF777Q9ULD5 760 aaPredicted RBP23.89■■□□□ 1.41
PTCD1-204ENST00000430982 DNMT1P26358 1616 aaKnown RBP23.88■■□□□ 1.41
PTCD1-204ENST00000430982 A2ML1A8K2U0 1454 aa23.88■■□□□ 1.41
PTCD1-204ENST00000430982 MED1Q15648 1581 aaPredicted RBP23.88■■□□□ 1.41
PTCD1-204ENST00000430982 ADGBQ8N7X0 1667 aa23.86■■□□□ 1.41
PTCD1-204ENST00000430982 HNRNPMP52272 730 aaKnown RBP eCLIP23.86■■□□□ 1.41
PTCD1-204ENST00000430982 CFDP1Q9UEE9 299 aaPredicted RBP23.86■■□□□ 1.41
PTCD1-204ENST00000430982 PPP6R1Q9UPN7 881 aa23.86■■□□□ 1.41
PTCD1-204ENST00000430982 LRRC9Q6ZRR7 1453 aa23.86■■□□□ 1.41
PTCD1-204ENST00000430982 NEURL4Q96JN8 1562 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms