RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ATP10BO94823 1461 aa20.19■□□□□ 0.82
HOXC4-202ENST00000430889 CAMSAP2Q08AD1 1489 aa20.19■□□□□ 0.82
HOXC4-202ENST00000430889 CDC42BPAQ5VT25 1732 aa20.19■□□□□ 0.82
HOXC4-202ENST00000430889 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
HOXC4-202ENST00000430889 ADGBQ8N7X0 1667 aa20.18■□□□□ 0.82
HOXC4-202ENST00000430889 ABCC10Q5T3U5 1492 aa20.18■□□□□ 0.82
HOXC4-202ENST00000430889 PPP1R15AO75807 674 aaPredicted RBP20.18■□□□□ 0.82
HOXC4-202ENST00000430889 NEUROD1Q13562 356 aa20.18■□□□□ 0.82
HOXC4-202ENST00000430889 RRP7BPQ9NSQ0 103 aa20.18■□□□□ 0.82
HOXC4-202ENST00000430889 CHIC2Q9UKJ5 165 aa20.15■□□□□ 0.82
HOXC4-202ENST00000430889 ZNF644Q9H582 1327 aaPredicted RBP20.14■□□□□ 0.82
HOXC4-202ENST00000430889 ADGRL2O95490 1459 aa20.13■□□□□ 0.81
HOXC4-202ENST00000430889 CENPBP07199 599 aaPredicted RBP20.13■□□□□ 0.81
HOXC4-202ENST00000430889 TONSLQ96HA7 1378 aa20.09■□□□□ 0.81
HOXC4-202ENST00000430889 PTPRGP23470 1445 aa20.08■□□□□ 0.81
HOXC4-202ENST00000430889 NCOA1Q15788 1441 aa20.06■□□□□ 0.8
HOXC4-202ENST00000430889 CFDP1Q9UEE9 299 aaPredicted RBP20.06■□□□□ 0.8
HOXC4-202ENST00000430889 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
HOXC4-202ENST00000430889 SHANK2Q9UPX8 1470 aa20.05■□□□□ 0.8
HOXC4-202ENST00000430889 ERCC6L2Q5T890 1561 aa20.03■□□□□ 0.8
HOXC4-202ENST00000430889 PLEKHD1A6NEE1 506 aa20.03■□□□□ 0.8
HOXC4-202ENST00000430889 MPHOSPH9Q99550 1183 aa20.03■□□□□ 0.8
HOXC4-202ENST00000430889 PREX2Q70Z35 1606 aa20.02■□□□□ 0.8
HOXC4-202ENST00000430889 ARHGEF5Q12774 1597 aa20.01■□□□□ 0.79
HOXC4-202ENST00000430889 CDC42BPBQ9Y5S2 1711 aa20.01■□□□□ 0.79
HOXC4-202ENST00000430889 SENP3Q9H4L4 574 aaPredicted RBP20.01■□□□□ 0.79
HOXC4-202ENST00000430889 PZPP20742 1482 aa20■□□□□ 0.79
HOXC4-202ENST00000430889 ANKRD30BQ9BXX2 1392 aa20■□□□□ 0.79
HOXC4-202ENST00000430889 ABCC2Q92887 1545 aa19.99■□□□□ 0.79
HOXC4-202ENST00000430889 TRIM52Q96A61 297 aa19.99■□□□□ 0.79
HOXC4-202ENST00000430889 RPRD2Q5VT52 1461 aaKnown RBP19.96■□□□□ 0.79
HOXC4-202ENST00000430889 SAMD9LQ8IVG5 1584 aa19.96■□□□□ 0.79
HOXC4-202ENST00000430889 MBD5Q9P267 1494 aa19.95■□□□□ 0.78
HOXC4-202ENST00000430889 TEX14Q8IWB6 1497 aa19.94■□□□□ 0.78
HOXC4-202ENST00000430889 ANKRD30AQ9BXX3 1397 aa19.94■□□□□ 0.78
HOXC4-202ENST00000430889 YTHDC1Q96MU7 727 aaKnown RBP19.93■□□□□ 0.78
HOXC4-202ENST00000430889 TTC37Q6PGP7 1564 aa19.92■□□□□ 0.78
HOXC4-202ENST00000430889 C9orf84Q5VXU9 1444 aa19.92■□□□□ 0.78
HOXC4-202ENST00000430889 KDM5DQ9BY66 1539 aa19.92■□□□□ 0.78
HOXC4-202ENST00000430889 UHRF1BP1LA0JNW5 1464 aa19.9■□□□□ 0.78
HOXC4-202ENST00000430889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.9■□□□□ 0.78
HOXC4-202ENST00000430889 ZNF777Q9ULD5 760 aaPredicted RBP19.9■□□□□ 0.78
HOXC4-202ENST00000430889 ANKRD50Q9ULJ7 1429 aa19.89■□□□□ 0.77
HOXC4-202ENST00000430889 MAST1Q9Y2H9 1570 aa19.88■□□□□ 0.77
HOXC4-202ENST00000430889 MYO5CQ9NQX4 1742 aa19.87■□□□□ 0.77
HOXC4-202ENST00000430889 ZCCHC11Q5TAX3 1644 aaKnown RBP19.87■□□□□ 0.77
HOXC4-202ENST00000430889 FOXD1Q16676 465 aa19.87■□□□□ 0.77
HOXC4-202ENST00000430889 GTF3C3Q9Y5Q9 886 aa19.87■□□□□ 0.77
HOXC4-202ENST00000430889 CCDC141Q6ZP82 1450 aa19.86■□□□□ 0.77
HOXC4-202ENST00000430889 KIAA1107Q9UPP5 1409 aa19.85■□□□□ 0.77
HOXC4-202ENST00000430889 DDX10Q13206 875 aaKnown RBP19.84■□□□□ 0.77
HOXC4-202ENST00000430889 SLC4A1APQ9BWU0 796 aaKnown RBP19.84■□□□□ 0.77
HOXC4-202ENST00000430889 L3MBTL2Q969R5 705 aa19.84■□□□□ 0.77
HOXC4-202ENST00000430889 HIRIP3Q9BW71 556 aaPredicted RBP19.82■□□□□ 0.76
HOXC4-202ENST00000430889 SYCP2Q9BX26 1530 aa19.81■□□□□ 0.76
HOXC4-202ENST00000430889 PLXNC1O60486 1568 aa19.79■□□□□ 0.76
HOXC4-202ENST00000430889 KIF15Q9NS87 1388 aa19.79■□□□□ 0.76
HOXC4-202ENST00000430889 ARHGAP5Q13017 1502 aa19.79■□□□□ 0.76
HOXC4-202ENST00000430889 HNRNPMP52272 730 aaKnown RBP eCLIP19.78■□□□□ 0.76
HOXC4-202ENST00000430889 RSPH4AQ5TD94 716 aa19.78■□□□□ 0.76
HOXC4-202ENST00000430889 PLEKHH2Q8IVE3 1493 aa19.77■□□□□ 0.75
HOXC4-202ENST00000430889 POLR1AO95602 1720 aaPredicted RBP19.76■□□□□ 0.75
HOXC4-202ENST00000430889 UNC13BO14795 1591 aa19.76■□□□□ 0.75
HOXC4-202ENST00000430889 TSPY4P0CV99 314 aa19.75■□□□□ 0.75
HOXC4-202ENST00000430889 TSPY10P0CW01 314 aa19.75■□□□□ 0.75
HOXC4-202ENST00000430889 HSPA5P11021 654 aaKnown RBP19.75■□□□□ 0.75
HOXC4-202ENST00000430889 NBPF8Q3BBV2 869 aa19.75■□□□□ 0.75
HOXC4-202ENST00000430889 SPATA31E1Q6ZUB1 1445 aa19.73■□□□□ 0.75
HOXC4-202ENST00000430889 PLCH2O75038 1416 aa19.72■□□□□ 0.75
HOXC4-202ENST00000430889 PKD2Q13563 968 aa19.72■□□□□ 0.75
HOXC4-202ENST00000430889 ARHGEF12Q9NZN5 1544 aa19.72■□□□□ 0.75
HOXC4-202ENST00000430889 ARAP3Q8WWN8 1544 aa19.72■□□□□ 0.75
HOXC4-202ENST00000430889 KCNH8Q96L42 1107 aa19.71■□□□□ 0.75
HOXC4-202ENST00000430889 NUP155O75694 1391 aa19.71■□□□□ 0.75
HOXC4-202ENST00000430889 ABCC1P33527 1531 aa19.7■□□□□ 0.74
HOXC4-202ENST00000430889 CCER2I3L3R5 266 aa19.7■□□□□ 0.74
HOXC4-202ENST00000430889 FAM135AQ9P2D6 1515 aa19.7■□□□□ 0.74
HOXC4-202ENST00000430889 EIF4G2P78344 907 aaKnown RBP eCLIP19.69■□□□□ 0.74
HOXC4-202ENST00000430889 WASHC2AQ641Q2 1341 aa19.69■□□□□ 0.74
HOXC4-202ENST00000430889 UHRF1BP1Q6BDS2 1440 aa19.68■□□□□ 0.74
HOXC4-202ENST00000430889 IQGAP3Q86VI3 1631 aa19.67■□□□□ 0.74
HOXC4-202ENST00000430889 MAGI2Q86UL8 1455 aa19.67■□□□□ 0.74
HOXC4-202ENST00000430889 DUOX2Q9NRD8 1548 aa19.65■□□□□ 0.74
HOXC4-202ENST00000430889 POTEDQ86YR6 584 aa19.64■□□□□ 0.73
HOXC4-202ENST00000430889 ANP32CO43423 234 aa19.63■□□□□ 0.73
HOXC4-202ENST00000430889 CCDC7Q96M83 1385 aa19.62■□□□□ 0.73
HOXC4-202ENST00000430889 CNTLNQ9NXG0 1405 aa19.61■□□□□ 0.73
HOXC4-202ENST00000430889 KDM5CP41229 1560 aa19.61■□□□□ 0.73
HOXC4-202ENST00000430889 ABCA9Q8IUA7 1624 aa19.61■□□□□ 0.73
HOXC4-202ENST00000430889 RALGAPBQ86X10 1494 aa19.61■□□□□ 0.73
HOXC4-202ENST00000430889 WDR7Q9Y4E6 1490 aa19.6■□□□□ 0.73
HOXC4-202ENST00000430889 ERBINQ96RT1 1412 aa19.6■□□□□ 0.73
HOXC4-202ENST00000430889 C11orf95C9JLR9 678 aaPredicted RBP19.59■□□□□ 0.73
HOXC4-202ENST00000430889 BCORL1Q5H9F3 1711 aa19.58■□□□□ 0.72
HOXC4-202ENST00000430889 TRAPPC8Q9Y2L5 1435 aa19.57■□□□□ 0.72
HOXC4-202ENST00000430889 EFCAB2Q5VUJ9 269 aa19.57■□□□□ 0.72
HOXC4-202ENST00000430889 PLA2R1Q13018 1463 aa19.57■□□□□ 0.72
HOXC4-202ENST00000430889 ZFYVE16Q7Z3T8 1539 aa19.56■□□□□ 0.72
HOXC4-202ENST00000430889 ATP10AO60312 1499 aa19.55■□□□□ 0.72
HOXC4-202ENST00000430889 RTEL1-TNFRSF6BF6WH68 1400 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms