RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SYAP1Q96A49 352 aaPredicted RBP9.56□□□□□ -0.88
SYNPO2-202ENST00000429713 RAPGEF2Q9Y4G8 1499 aa9.55□□□□□ -0.88
SYNPO2-202ENST00000429713 PDE3BQ13370 1112 aa9.55□□□□□ -0.88
SYNPO2-202ENST00000429713 TNNT3P45378 269 aaPredicted RBP9.55□□□□□ -0.88
SYNPO2-202ENST00000429713 ZBED9Q6R2W3 1325 aa9.55□□□□□ -0.88
SYNPO2-202ENST00000429713 DNTTIP2Q5QJE6 756 aaKnown RBP9.54□□□□□ -0.88
SYNPO2-202ENST00000429713 MYH16Q9H6N6 1097 aa9.54□□□□□ -0.88
SYNPO2-202ENST00000429713 NCBP3Q53F19 620 aaKnown RBP9.54□□□□□ -0.88
SYNPO2-202ENST00000429713 PHF14O94880 888 aa9.54□□□□□ -0.88
SYNPO2-202ENST00000429713 PTMAP06454 111 aaKnown RBP9.54□□□□□ -0.88
SYNPO2-202ENST00000429713 RTN4Q9NQC3 1192 aaKnown RBP9.54□□□□□ -0.88
SYNPO2-202ENST00000429713 PDCL3Q9H2J4 239 aa9.54□□□□□ -0.88
SYNPO2-202ENST00000429713 NOM1Q5C9Z4 860 aaKnown RBP9.53□□□□□ -0.88
SYNPO2-202ENST00000429713 PDE4CQ08493 712 aa9.52□□□□□ -0.88
SYNPO2-202ENST00000429713 AXDND1Q5T1B0 1012 aaPredicted RBP9.52□□□□□ -0.89
SYNPO2-202ENST00000429713 NGEFQ8N5V2 710 aa9.51□□□□□ -0.89
SYNPO2-202ENST00000429713 GPS2Q13227 327 aa9.51□□□□□ -0.89
SYNPO2-202ENST00000429713 RUSC2Q8N2Y8 1516 aa9.51□□□□□ -0.89
SYNPO2-202ENST00000429713 PDCL2Q8N4E4 241 aa9.5□□□□□ -0.89
SYNPO2-202ENST00000429713 HTATSF1O43719 755 aaKnown RBP9.5□□□□□ -0.89
SYNPO2-202ENST00000429713 EIF3AQ14152 1382 aaKnown RBP9.5□□□□□ -0.89
SYNPO2-202ENST00000429713 EIF4G1Q04637 1599 aaKnown RBP9.5□□□□□ -0.89
SYNPO2-202ENST00000429713 MAPK8IP3Q9UPT6 1336 aa9.5□□□□□ -0.89
SYNPO2-202ENST00000429713 CUX2O14529 1486 aa9.5□□□□□ -0.89
SYNPO2-202ENST00000429713 SENP3-EIF4A1A0A087X0R7 540 aa9.5□□□□□ -0.89
SYNPO2-202ENST00000429713 DHX8Q14562 1220 aaKnown RBP9.5□□□□□ -0.89
SYNPO2-202ENST00000429713 CC2D2AQ9P2K1 1620 aa9.5□□□□□ -0.89
SYNPO2-202ENST00000429713 KANK4Q5T7N3 995 aaPredicted RBP9.49□□□□□ -0.89
SYNPO2-202ENST00000429713 CWC15Q9P013 229 aaKnown RBP9.49□□□□□ -0.89
SYNPO2-202ENST00000429713 TERF1P54274 439 aa9.49□□□□□ -0.89
SYNPO2-202ENST00000429713 CAVIN1Q6NZI2 390 aaKnown RBP9.49□□□□□ -0.89
SYNPO2-202ENST00000429713 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.49□□□□□ -0.89
SYNPO2-202ENST00000429713 TSPY4P0CV99 314 aa9.49□□□□□ -0.89
SYNPO2-202ENST00000429713 TSPY10P0CW01 314 aa9.49□□□□□ -0.89
SYNPO2-202ENST00000429713 CREBRFQ8IUR6 639 aa9.48□□□□□ -0.89
SYNPO2-202ENST00000429713 DHX57Q6P158 1386 aaKnown RBP9.48□□□□□ -0.89
SYNPO2-202ENST00000429713 IL27Q8NEV9 243 aa9.48□□□□□ -0.89
SYNPO2-202ENST00000429713 CTR9Q6PD62 1173 aa9.48□□□□□ -0.89
SYNPO2-202ENST00000429713 MRE11P49959 708 aa9.47□□□□□ -0.89
SYNPO2-202ENST00000429713 CALD1Q05682 793 aaKnown RBP9.47□□□□□ -0.89
SYNPO2-202ENST00000429713 TPM3P06753 285 aa9.47□□□□□ -0.89
SYNPO2-202ENST00000429713 MCM5P33992 734 aa9.47□□□□□ -0.89
SYNPO2-202ENST00000429713 CARD11Q9BXL7 1154 aa9.47□□□□□ -0.89
SYNPO2-202ENST00000429713 KCNH8Q96L42 1107 aa9.46□□□□□ -0.89
SYNPO2-202ENST00000429713 SETQ01105 290 aaPredicted RBP9.46□□□□□ -0.89
SYNPO2-202ENST00000429713 CFAP65Q6ZU64 1925 aaKnown RBP9.45□□□□□ -0.9
SYNPO2-202ENST00000429713 CARMIL1Q5VZK9 1371 aa9.45□□□□□ -0.9
SYNPO2-202ENST00000429713 TEX35Q5T0J7 233 aa9.45□□□□□ -0.9
SYNPO2-202ENST00000429713 KIF20AO95235 890 aa9.44□□□□□ -0.9
SYNPO2-202ENST00000429713 HSCBQ8IWL3 235 aa9.44□□□□□ -0.9
SYNPO2-202ENST00000429713 HSP90B1P14625 803 aaKnown RBP9.44□□□□□ -0.9
SYNPO2-202ENST00000429713 KNSTRNQ9Y448 316 aa9.44□□□□□ -0.9
SYNPO2-202ENST00000429713 SUPT6HQ7KZ85 1726 aaKnown RBP9.44□□□□□ -0.9
SYNPO2-202ENST00000429713 FAM193AP78312 1265 aa9.44□□□□□ -0.9
SYNPO2-202ENST00000429713 CENPJQ9HC77 1338 aaPredicted RBP9.44□□□□□ -0.9
SYNPO2-202ENST00000429713 SYNJ1O43426 1573 aa9.43□□□□□ -0.9
SYNPO2-202ENST00000429713 FMN1Q68DA7 1419 aa9.43□□□□□ -0.9
SYNPO2-202ENST00000429713 APPP05067 770 aa9.43□□□□□ -0.9
SYNPO2-202ENST00000429713 CASC1Q6TDU7 716 aa9.42□□□□□ -0.9
SYNPO2-202ENST00000429713 NINLQ9Y2I6 1382 aa9.42□□□□□ -0.9
SYNPO2-202ENST00000429713 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
SYNPO2-202ENST00000429713 HSPA5P11021 654 aaKnown RBP9.42□□□□□ -0.9
SYNPO2-202ENST00000429713 PDIA4P13667 645 aaKnown RBP9.42□□□□□ -0.9
SYNPO2-202ENST00000429713 USP8P40818 1118 aa9.42□□□□□ -0.9
SYNPO2-202ENST00000429713 KIF3AQ9Y496 699 aa9.42□□□□□ -0.9
SYNPO2-202ENST00000429713 CHMP7Q8WUX9 453 aaPredicted RBP9.41□□□□□ -0.9
SYNPO2-202ENST00000429713 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
SYNPO2-202ENST00000429713 FTSJ3Q8IY81 847 aaKnown RBP9.41□□□□□ -0.9
SYNPO2-202ENST00000429713 CCDC18Q5T9S5 1454 aa9.4□□□□□ -0.9
SYNPO2-202ENST00000429713 HS1BP3Q53T59 392 aa9.4□□□□□ -0.9
SYNPO2-202ENST00000429713 DIAPH3Q9NSV4 1193 aa9.4□□□□□ -0.9
SYNPO2-202ENST00000429713 PLEKHH2Q8IVE3 1493 aa9.4□□□□□ -0.9
SYNPO2-202ENST00000429713 RGS3P49796 1198 aa9.4□□□□□ -0.9
SYNPO2-202ENST00000429713 CDCA8Q53HL2 280 aa9.4□□□□□ -0.9
SYNPO2-202ENST00000429713 CCDC144AA2RUR9 1427 aa9.4□□□□□ -0.9
SYNPO2-202ENST00000429713 CHGAP10645 457 aaKnown RBP9.4□□□□□ -0.91
SYNPO2-202ENST00000429713 PDS5BQ9NTI5 1447 aa9.4□□□□□ -0.91
SYNPO2-202ENST00000429713 CUX1P39880 1505 aa9.39□□□□□ -0.91
SYNPO2-202ENST00000429713 CFDP1Q9UEE9 299 aaPredicted RBP9.39□□□□□ -0.91
SYNPO2-202ENST00000429713 RGL3Q3MIN7 710 aa9.39□□□□□ -0.91
SYNPO2-202ENST00000429713 CC2D1BQ5T0F9 858 aaKnown RBP9.39□□□□□ -0.91
SYNPO2-202ENST00000429713 LETM1O95202 739 aaPredicted RBP9.39□□□□□ -0.91
SYNPO2-202ENST00000429713 KIF16BQ96L93 1317 aa9.39□□□□□ -0.91
SYNPO2-202ENST00000429713 TOP2BQ02880 1626 aa9.39□□□□□ -0.91
SYNPO2-202ENST00000429713 PPP1R15AO75807 674 aaPredicted RBP9.38□□□□□ -0.91
SYNPO2-202ENST00000429713 ANO8Q9HCE9 1232 aaPredicted RBP9.38□□□□□ -0.91
SYNPO2-202ENST00000429713 CLGNO14967 610 aa9.38□□□□□ -0.91
SYNPO2-202ENST00000429713 GTPBP4Q9BZE4 634 aaKnown RBP9.38□□□□□ -0.91
SYNPO2-202ENST00000429713 BRD2P25440 801 aaKnown RBP9.38□□□□□ -0.91
SYNPO2-202ENST00000429713 RCAN3Q9UKA8 241 aa9.37□□□□□ -0.91
SYNPO2-202ENST00000429713 WDR97A6NE52 1622 aa9.37□□□□□ -0.91
SYNPO2-202ENST00000429713 ANKRD30AQ9BXX3 1397 aa9.37□□□□□ -0.91
SYNPO2-202ENST00000429713 DYNC1I1O14576 645 aa9.36□□□□□ -0.91
SYNPO2-202ENST00000429713 CTTNBP2Q8WZ74 1663 aa9.36□□□□□ -0.91
SYNPO2-202ENST00000429713 NUDCQ9Y266 331 aa9.36□□□□□ -0.91
SYNPO2-202ENST00000429713 CENPQQ7L2Z9 268 aaPredicted RBP9.36□□□□□ -0.91
SYNPO2-202ENST00000429713 CCDC173Q0VFZ6 552 aa9.36□□□□□ -0.91
SYNPO2-202ENST00000429713 DNAJC2Q99543 621 aaKnown RBP9.36□□□□□ -0.91
SYNPO2-202ENST00000429713 NPM1P06748 294 aaKnown RBP eCLIP9.36□□□□□ -0.91
SYNPO2-202ENST00000429713 CALCOCO1Q9P1Z2 691 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms