RNA–Protein interactions for RNA: ENST00000429602.6

SIMC1-203, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-203ENST00000429602 EIF4G3O43432 1585 aaKnown RBP28.14■■■□□ 2.1
SIMC1-203ENST00000429602 EIF4G2P78344 907 aaKnown RBP eCLIP28.13■■■□□ 2.09
SIMC1-203ENST00000429602 ROCK1Q13464 1354 aa28.12■■■□□ 2.09
SIMC1-203ENST00000429602 RAPGEF6Q8TEU7 1601 aa28.12■■■□□ 2.09
SIMC1-203ENST00000429602 FBLN2P98095 1184 aa28.11■■■□□ 2.09
SIMC1-203ENST00000429602 PRG4Q92954 1404 aaPredicted RBP28.11■■■□□ 2.09
SIMC1-203ENST00000429602 CHMP7Q8WUX9 453 aaPredicted RBP28.11■■■□□ 2.09
SIMC1-203ENST00000429602 TSHZ2Q9NRE2 1034 aa28.09■■■□□ 2.09
SIMC1-203ENST00000429602 SLC4A1APQ9BWU0 796 aaKnown RBP28.08■■■□□ 2.09
SIMC1-203ENST00000429602 ANKRD30BQ9BXX2 1392 aa28.08■■■□□ 2.09
SIMC1-203ENST00000429602 DNMT1P26358 1616 aaKnown RBP28.07■■■□□ 2.08
SIMC1-203ENST00000429602 ERCC6Q03468 1493 aa28.06■■■□□ 2.08
SIMC1-203ENST00000429602 PLB1Q6P1J6 1458 aa28.06■■■□□ 2.08
SIMC1-203ENST00000429602 CFDP1Q9UEE9 299 aaPredicted RBP28.05■■■□□ 2.08
SIMC1-203ENST00000429602 NEFLP07196 543 aa28.04■■■□□ 2.08
SIMC1-203ENST00000429602 NBPF8Q3BBV2 869 aa28.04■■■□□ 2.08
SIMC1-203ENST00000429602 ZNF777Q9ULD5 760 aaPredicted RBP28.03■■■□□ 2.08
SIMC1-203ENST00000429602 TROQ12816 1431 aaPredicted RBP28.03■■■□□ 2.08
SIMC1-203ENST00000429602 C11orf95C9JLR9 678 aaPredicted RBP28.02■■■□□ 2.08
SIMC1-203ENST00000429602 RPRD2Q5VT52 1461 aaKnown RBP28.01■■■□□ 2.07
SIMC1-203ENST00000429602 CEP170Q5SW79 1584 aa27.99■■■□□ 2.07
SIMC1-203ENST00000429602 HNRNPUQ00839 825 aaKnown RBP eCLIP27.99■■■□□ 2.07
SIMC1-203ENST00000429602 MAGI1Q96QZ7 1491 aaPredicted RBP27.98■■■□□ 2.07
SIMC1-203ENST00000429602 CAMSAP2Q08AD1 1489 aa27.98■■■□□ 2.07
SIMC1-203ENST00000429602 TEX14Q8IWB6 1497 aa27.97■■■□□ 2.07
SIMC1-203ENST00000429602 SYNJ2O15056 1496 aa27.96■■■□□ 2.07
SIMC1-203ENST00000429602 GPATCH8Q9UKJ3 1502 aaKnown RBP27.95■■■□□ 2.06
SIMC1-203ENST00000429602 JPH4Q96JJ6 628 aa27.95■■■□□ 2.06
SIMC1-203ENST00000429602 CNTLNQ9NXG0 1405 aa27.93■■■□□ 2.06
SIMC1-203ENST00000429602 NCOA1Q15788 1441 aa27.92■■■□□ 2.06
SIMC1-203ENST00000429602 CCDC7Q96M83 1385 aa27.92■■■□□ 2.06
SIMC1-203ENST00000429602 KIF14Q15058 1648 aa27.92■■■□□ 2.06
SIMC1-203ENST00000429602 CCDC184Q52MB2 194 aa27.91■■■□□ 2.06
SIMC1-203ENST00000429602 PZPP20742 1482 aa27.9■■■□□ 2.06
SIMC1-203ENST00000429602 CARMIL2Q6F5E8 1435 aa27.89■■■□□ 2.05
SIMC1-203ENST00000429602 NUP160Q12769 1436 aa27.84■■■□□ 2.05
SIMC1-203ENST00000429602 PRKRIP1Q9H875 184 aaPredicted RBP27.84■■■□□ 2.05
SIMC1-203ENST00000429602 KIF7Q2M1P5 1343 aa27.83■■■□□ 2.05
SIMC1-203ENST00000429602 ITSN2Q9NZM3 1697 aa27.82■■■□□ 2.04
SIMC1-203ENST00000429602 SPATA31E1Q6ZUB1 1445 aa27.82■■■□□ 2.04
SIMC1-203ENST00000429602 PKD2Q13563 968 aa27.82■■■□□ 2.04
SIMC1-203ENST00000429602 ZNF326Q5BKZ1 582 aaKnown RBP27.81■■■□□ 2.04
SIMC1-203ENST00000429602 PLEKHD1A6NEE1 506 aa27.81■■■□□ 2.04
SIMC1-203ENST00000429602 ANKRD30AQ9BXX3 1397 aa27.8■■■□□ 2.04
SIMC1-203ENST00000429602 ADGRL2O95490 1459 aa27.78■■■□□ 2.04
SIMC1-203ENST00000429602 KIAA1107Q9UPP5 1409 aa27.78■■■□□ 2.04
SIMC1-203ENST00000429602 MYT1Q01538 1121 aa27.78■■■□□ 2.04
SIMC1-203ENST00000429602 ADCY10Q96PN6 1610 aa27.77■■■□□ 2.04
SIMC1-203ENST00000429602 FAM9BQ8IZU0 186 aa27.77■■■□□ 2.04
SIMC1-203ENST00000429602 IRX6P78412 446 aaPredicted RBP27.76■■■□□ 2.03
SIMC1-203ENST00000429602 ANKRD50Q9ULJ7 1429 aa27.76■■■□□ 2.03
SIMC1-203ENST00000429602 MRS2Q9HD23 443 aa27.75■■■□□ 2.03
SIMC1-203ENST00000429602 ADGBQ8N7X0 1667 aa27.75■■■□□ 2.03
SIMC1-203ENST00000429602 ATP10BO94823 1461 aa27.73■■■□□ 2.03
SIMC1-203ENST00000429602 CROCC2H7BZ55 1655 aa27.7■■■□□ 2.03
SIMC1-203ENST00000429602 POLR3GLQ9BT43 218 aa27.7■■■□□ 2.02
SIMC1-203ENST00000429602 CNGB1Q14028 1251 aaPredicted RBP27.69■■■□□ 2.02
SIMC1-203ENST00000429602 ABCA8O94911 1581 aa27.69■■■□□ 2.02
SIMC1-203ENST00000429602 NUP155O75694 1391 aa27.69■■■□□ 2.02
SIMC1-203ENST00000429602 MBD5Q9P267 1494 aa27.69■■■□□ 2.02
SIMC1-203ENST00000429602 ABCC10Q5T3U5 1492 aa27.68■■■□□ 2.02
SIMC1-203ENST00000429602 C9orf84Q5VXU9 1444 aa27.68■■■□□ 2.02
SIMC1-203ENST00000429602 USP47Q96K76 1375 aa27.67■■■□□ 2.02
SIMC1-203ENST00000429602 HNRNPMP52272 730 aaKnown RBP eCLIP27.65■■■□□ 2.02
SIMC1-203ENST00000429602 TSPY4P0CV99 314 aa27.64■■■□□ 2.02
SIMC1-203ENST00000429602 TSPY10P0CW01 314 aa27.64■■■□□ 2.02
SIMC1-203ENST00000429602 CDC42BPAQ5VT25 1732 aa27.64■■■□□ 2.02
SIMC1-203ENST00000429602 SHANK2Q9UPX8 1470 aa27.59■■■□□ 2.01
SIMC1-203ENST00000429602 KIF15Q9NS87 1388 aa27.58■■■□□ 2.01
SIMC1-203ENST00000429602 RBM19Q9Y4C8 960 aaKnown RBP27.58■■■□□ 2.01
SIMC1-203ENST00000429602 PTPRGP23470 1445 aa27.57■■■□□ 2
SIMC1-203ENST00000429602 DHX29Q7Z478 1369 aaKnown RBP27.56■■■□□ 2
SIMC1-203ENST00000429602 KDM2AQ9Y2K7 1162 aa27.55■■■□□ 2
SIMC1-203ENST00000429602 ZBED9Q6R2W3 1325 aa27.55■■■□□ 2
SIMC1-203ENST00000429602 BCORL1Q5H9F3 1711 aa27.55■■■□□ 2
SIMC1-203ENST00000429602 POLR1AO95602 1720 aaPredicted RBP27.54■■■□□ 2
SIMC1-203ENST00000429602 CARD11Q9BXL7 1154 aa27.53■■■□□ 2
SIMC1-203ENST00000429602 KDM5CP41229 1560 aa27.49■■□□□ 1.99
SIMC1-203ENST00000429602 UHRF1BP1Q6BDS2 1440 aa27.49■■□□□ 1.99
SIMC1-203ENST00000429602 DCAF11Q8TEB1 546 aa27.48■■□□□ 1.99
SIMC1-203ENST00000429602 RALGAPBQ86X10 1494 aa27.47■■□□□ 1.99
SIMC1-203ENST00000429602 KDM5DQ9BY66 1539 aa27.45■■□□□ 1.98
SIMC1-203ENST00000429602 ST20-MTHFSA0A0A6YYL1 179 aa27.44■■□□□ 1.98
SIMC1-203ENST00000429602 CCDC141Q6ZP82 1450 aa27.42■■□□□ 1.98
SIMC1-203ENST00000429602 ARHGEF5Q12774 1597 aa27.42■■□□□ 1.98
SIMC1-203ENST00000429602 SAMD9LQ8IVG5 1584 aa27.42■■□□□ 1.98
SIMC1-203ENST00000429602 SENP3-EIF4A1A0A087X0R7 540 aa27.42■■□□□ 1.98
SIMC1-203ENST00000429602 ARID4BQ4LE39 1312 aaPredicted RBP27.41■■□□□ 1.98
SIMC1-203ENST00000429602 ARHGEF12Q9NZN5 1544 aa27.41■■□□□ 1.98
SIMC1-203ENST00000429602 ANP32EQ9BTT0 268 aa27.4■■□□□ 1.98
SIMC1-203ENST00000429602 PPP4R2Q9NY27 417 aa27.39■■□□□ 1.97
SIMC1-203ENST00000429602 ERICH6BQ5W0A0 696 aa27.37■■□□□ 1.97
SIMC1-203ENST00000429602 FAM135AQ9P2D6 1515 aa27.36■■□□□ 1.97
SIMC1-203ENST00000429602 CDC42BPBQ9Y5S2 1711 aa27.36■■□□□ 1.97
SIMC1-203ENST00000429602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.36■■□□□ 1.97
SIMC1-203ENST00000429602 ROCK2O75116 1388 aaKnown RBP27.34■■□□□ 1.97
SIMC1-203ENST00000429602 RGL3Q3MIN7 710 aa27.34■■□□□ 1.97
SIMC1-203ENST00000429602 PREX2Q70Z35 1606 aa27.34■■□□□ 1.97
SIMC1-203ENST00000429602 SYCP2Q9BX26 1530 aa27.33■■□□□ 1.97
SIMC1-203ENST00000429602 RSPH4AQ5TD94 716 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms