RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 CHIC2Q9UKJ5 165 aa26.25■■□□□ 1.79
PDE6B-202ENST00000429163 ANP32CO43423 234 aa26.23■■□□□ 1.79
PDE6B-202ENST00000429163 ADGRL2O95490 1459 aa26.22■■□□□ 1.79
PDE6B-202ENST00000429163 TRIM52Q96A61 297 aa26.22■■□□□ 1.79
PDE6B-202ENST00000429163 ADGBQ8N7X0 1667 aa26.21■■□□□ 1.79
PDE6B-202ENST00000429163 CAMSAP2Q08AD1 1489 aa26.19■■□□□ 1.78
PDE6B-202ENST00000429163 RPRD2Q5VT52 1461 aaKnown RBP26.19■■□□□ 1.78
PDE6B-202ENST00000429163 GPATCH8Q9UKJ3 1502 aaKnown RBP26.19■■□□□ 1.78
PDE6B-202ENST00000429163 ANKRD30BQ9BXX2 1392 aa26.18■■□□□ 1.78
PDE6B-202ENST00000429163 ABCA8O94911 1581 aa26.18■■□□□ 1.78
PDE6B-202ENST00000429163 JPH4Q96JJ6 628 aa26.18■■□□□ 1.78
PDE6B-202ENST00000429163 PLB1Q6P1J6 1458 aa26.17■■□□□ 1.78
PDE6B-202ENST00000429163 PRG4Q92954 1404 aaPredicted RBP26.16■■□□□ 1.78
PDE6B-202ENST00000429163 CROCC2H7BZ55 1655 aa26.15■■□□□ 1.78
PDE6B-202ENST00000429163 NCOA1Q15788 1441 aa26.12■■□□□ 1.77
PDE6B-202ENST00000429163 CFDP1Q9UEE9 299 aaPredicted RBP26.12■■□□□ 1.77
PDE6B-202ENST00000429163 SHANK2Q9UPX8 1470 aa26.1■■□□□ 1.77
PDE6B-202ENST00000429163 KIF14Q15058 1648 aa26.09■■□□□ 1.77
PDE6B-202ENST00000429163 ARID3CA6NKF2 412 aa26.09■■□□□ 1.77
PDE6B-202ENST00000429163 SUPT16HQ9Y5B9 1047 aaKnown RBP26.09■■□□□ 1.77
PDE6B-202ENST00000429163 EIF4G2P78344 907 aaKnown RBP eCLIP26.08■■□□□ 1.77
PDE6B-202ENST00000429163 TEX14Q8IWB6 1497 aa26.08■■□□□ 1.77
PDE6B-202ENST00000429163 ZNF644Q9H582 1327 aaPredicted RBP26.06■■□□□ 1.76
PDE6B-202ENST00000429163 KCNH8Q96L42 1107 aa26.06■■□□□ 1.76
PDE6B-202ENST00000429163 ANKRD30AQ9BXX3 1397 aa26.05■■□□□ 1.76
PDE6B-202ENST00000429163 ABCC10Q5T3U5 1492 aa26.05■■□□□ 1.76
PDE6B-202ENST00000429163 HIRIP3Q9BW71 556 aaPredicted RBP26.04■■□□□ 1.76
PDE6B-202ENST00000429163 PZPP20742 1482 aa26.04■■□□□ 1.76
PDE6B-202ENST00000429163 L3MBTL2Q969R5 705 aa26.03■■□□□ 1.76
PDE6B-202ENST00000429163 PLEKHD1A6NEE1 506 aa26.03■■□□□ 1.76
PDE6B-202ENST00000429163 ATP10BO94823 1461 aa26.02■■□□□ 1.76
PDE6B-202ENST00000429163 HSPA5P11021 654 aaKnown RBP26.02■■□□□ 1.76
PDE6B-202ENST00000429163 CDC42BPAQ5VT25 1732 aa26.01■■□□□ 1.75
PDE6B-202ENST00000429163 SLC4A1APQ9BWU0 796 aaKnown RBP26.01■■□□□ 1.75
PDE6B-202ENST00000429163 FBLN2P98095 1184 aa25.99■■□□□ 1.75
PDE6B-202ENST00000429163 KIAA1107Q9UPP5 1409 aa25.98■■□□□ 1.75
PDE6B-202ENST00000429163 ARHGEF5Q12774 1597 aa25.97■■□□□ 1.75
PDE6B-202ENST00000429163 WASHC2AQ641Q2 1341 aa25.96■■□□□ 1.75
PDE6B-202ENST00000429163 POLR1AO95602 1720 aaPredicted RBP25.96■■□□□ 1.75
PDE6B-202ENST00000429163 KDM5DQ9BY66 1539 aa25.95■■□□□ 1.75
PDE6B-202ENST00000429163 CNTLNQ9NXG0 1405 aa25.94■■□□□ 1.74
PDE6B-202ENST00000429163 ANKRD50Q9ULJ7 1429 aa25.93■■□□□ 1.74
PDE6B-202ENST00000429163 SPATA31E1Q6ZUB1 1445 aa25.92■■□□□ 1.74
PDE6B-202ENST00000429163 MBD5Q9P267 1494 aa25.92■■□□□ 1.74
PDE6B-202ENST00000429163 PTPRGP23470 1445 aa25.89■■□□□ 1.74
PDE6B-202ENST00000429163 C9orf84Q5VXU9 1444 aa25.89■■□□□ 1.74
PDE6B-202ENST00000429163 RSPH4AQ5TD94 716 aa25.89■■□□□ 1.74
PDE6B-202ENST00000429163 CCDC7Q96M83 1385 aa25.89■■□□□ 1.73
PDE6B-202ENST00000429163 FOXD1Q16676 465 aa25.87■■□□□ 1.73
PDE6B-202ENST00000429163 SHROOM2Q13796 1616 aa25.86■■□□□ 1.73
PDE6B-202ENST00000429163 NBPF8Q3BBV2 869 aa25.84■■□□□ 1.73
PDE6B-202ENST00000429163 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.73
PDE6B-202ENST00000429163 PREX2Q70Z35 1606 aa25.83■■□□□ 1.72
PDE6B-202ENST00000429163 TSPY4P0CV99 314 aa25.82■■□□□ 1.72
PDE6B-202ENST00000429163 TSPY10P0CW01 314 aa25.82■■□□□ 1.72
PDE6B-202ENST00000429163 ZNF777Q9ULD5 760 aaPredicted RBP25.82■■□□□ 1.72
PDE6B-202ENST00000429163 UHRF1BP1Q6BDS2 1440 aa25.82■■□□□ 1.72
PDE6B-202ENST00000429163 ARID4BQ4LE39 1312 aaPredicted RBP25.81■■□□□ 1.72
PDE6B-202ENST00000429163 CCDC141Q6ZP82 1450 aa25.79■■□□□ 1.72
PDE6B-202ENST00000429163 MAST1Q9Y2H9 1570 aa25.77■■□□□ 1.72
PDE6B-202ENST00000429163 NEFLP07196 543 aa25.77■■□□□ 1.72
PDE6B-202ENST00000429163 PKD2Q13563 968 aa25.76■■□□□ 1.71
PDE6B-202ENST00000429163 CHD1O14646 1710 aa25.76■■□□□ 1.71
PDE6B-202ENST00000429163 CDC42BPBQ9Y5S2 1711 aa25.74■■□□□ 1.71
PDE6B-202ENST00000429163 KIF15Q9NS87 1388 aa25.74■■□□□ 1.71
PDE6B-202ENST00000429163 SAMD9LQ8IVG5 1584 aa25.73■■□□□ 1.71
PDE6B-202ENST00000429163 NUP155O75694 1391 aa25.73■■□□□ 1.71
PDE6B-202ENST00000429163 RALGAPBQ86X10 1494 aa25.72■■□□□ 1.71
PDE6B-202ENST00000429163 PLEKHH2Q8IVE3 1493 aa25.72■■□□□ 1.71
PDE6B-202ENST00000429163 PRKRIP1Q9H875 184 aaPredicted RBP25.7■■□□□ 1.71
PDE6B-202ENST00000429163 KIF7Q2M1P5 1343 aa25.7■■□□□ 1.7
PDE6B-202ENST00000429163 ABCC2Q92887 1545 aa25.69■■□□□ 1.7
PDE6B-202ENST00000429163 C11orf95C9JLR9 678 aaPredicted RBP25.69■■□□□ 1.7
PDE6B-202ENST00000429163 KDM5CP41229 1560 aa25.68■■□□□ 1.7
PDE6B-202ENST00000429163 MYT1Q01538 1121 aa25.67■■□□□ 1.7
PDE6B-202ENST00000429163 FKBP8Q14318 412 aa25.66■■□□□ 1.7
PDE6B-202ENST00000429163 ROCK2O75116 1388 aaKnown RBP25.66■■□□□ 1.7
PDE6B-202ENST00000429163 USP47Q96K76 1375 aa25.65■■□□□ 1.7
PDE6B-202ENST00000429163 PLXNC1O60486 1568 aa25.64■■□□□ 1.7
PDE6B-202ENST00000429163 UNC13BO14795 1591 aa25.63■■□□□ 1.69
PDE6B-202ENST00000429163 HNRNPUQ00839 825 aaKnown RBP eCLIP25.61■■□□□ 1.69
PDE6B-202ENST00000429163 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.61■■□□□ 1.69
PDE6B-202ENST00000429163 FAM135AQ9P2D6 1515 aa25.61■■□□□ 1.69
PDE6B-202ENST00000429163 MYO5CQ9NQX4 1742 aa25.61■■□□□ 1.69
PDE6B-202ENST00000429163 UHRF1BP1LA0JNW5 1464 aa25.61■■□□□ 1.69
PDE6B-202ENST00000429163 HNRNPMP52272 730 aaKnown RBP eCLIP25.6■■□□□ 1.69
PDE6B-202ENST00000429163 ERICH6BQ5W0A0 696 aa25.6■■□□□ 1.69
PDE6B-202ENST00000429163 TTC37Q6PGP7 1564 aa25.58■■□□□ 1.69
PDE6B-202ENST00000429163 ARHGAP5Q13017 1502 aa25.57■■□□□ 1.68
PDE6B-202ENST00000429163 SYCP2Q9BX26 1530 aa25.56■■□□□ 1.68
PDE6B-202ENST00000429163 BCORL1Q5H9F3 1711 aa25.55■■□□□ 1.68
PDE6B-202ENST00000429163 DHX29Q7Z478 1369 aaKnown RBP25.54■■□□□ 1.68
PDE6B-202ENST00000429163 IQGAP3Q86VI3 1631 aa25.53■■□□□ 1.68
PDE6B-202ENST00000429163 ZBED9Q6R2W3 1325 aa25.53■■□□□ 1.68
PDE6B-202ENST00000429163 TSHZ2Q9NRE2 1034 aa25.52■■□□□ 1.68
PDE6B-202ENST00000429163 CLASP1Q7Z460 1538 aa25.52■■□□□ 1.68
PDE6B-202ENST00000429163 DUOX2Q9NRD8 1548 aa25.52■■□□□ 1.68
PDE6B-202ENST00000429163 KTN1Q86UP2 1357 aaKnown RBP25.51■■□□□ 1.67
PDE6B-202ENST00000429163 ATP10AO60312 1499 aa25.51■■□□□ 1.67
PDE6B-202ENST00000429163 MAGI2Q86UL8 1455 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms