RNA–Protein interactions for RNA: ENST00000428457.1

TNS3-204, Transcript of tensin 3, humanhuman

TSL 1 (best)

Gene TNS3, Length 5,070 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-204ENST00000428457 ARID3AQ99856 593 aa12.88□□□□□ -0.35
TNS3-204ENST00000428457 SENP3Q9H4L4 574 aaPredicted RBP12.88□□□□□ -0.35
TNS3-204ENST00000428457 L1TD1Q5T7N2 865 aaKnown RBP12.87□□□□□ -0.35
TNS3-204ENST00000428457 PNNQ9H307 717 aaKnown RBP12.87□□□□□ -0.35
TNS3-204ENST00000428457 CARD11Q9BXL7 1154 aa12.87□□□□□ -0.35
TNS3-204ENST00000428457 RAPGEF2Q9Y4G8 1499 aa12.86□□□□□ -0.35
TNS3-204ENST00000428457 PLCB2Q00722 1185 aa12.86□□□□□ -0.35
TNS3-204ENST00000428457 GZF1Q9H116 711 aaPredicted RBP12.86□□□□□ -0.35
TNS3-204ENST00000428457 PTPRGP23470 1445 aa12.85□□□□□ -0.35
TNS3-204ENST00000428457 NPHP1O15259 732 aa12.85□□□□□ -0.35
TNS3-204ENST00000428457 FTSJ3Q8IY81 847 aaKnown RBP12.85□□□□□ -0.35
TNS3-204ENST00000428457 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
TNS3-204ENST00000428457 SLKQ9H2G2 1235 aaPredicted RBP12.84□□□□□ -0.35
TNS3-204ENST00000428457 ANKRD30AQ9BXX3 1397 aa12.84□□□□□ -0.35
TNS3-204ENST00000428457 HSP90AB1P08238 724 aaKnown RBP12.84□□□□□ -0.35
TNS3-204ENST00000428457 CC2D1BQ5T0F9 858 aaKnown RBP12.84□□□□□ -0.35
TNS3-204ENST00000428457 SPAG9O60271 1321 aaKnown RBP12.83□□□□□ -0.36
TNS3-204ENST00000428457 NCAPD3P42695 1498 aa12.83□□□□□ -0.36
TNS3-204ENST00000428457 CCDC18Q5T9S5 1454 aa12.82□□□□□ -0.36
TNS3-204ENST00000428457 CDK11BP21127 795 aaKnown RBP12.82□□□□□ -0.36
TNS3-204ENST00000428457 KANK4Q5T7N3 995 aaPredicted RBP12.82□□□□□ -0.36
TNS3-204ENST00000428457 HSPA5P11021 654 aaKnown RBP12.82□□□□□ -0.36
TNS3-204ENST00000428457 MSNP26038 577 aaKnown RBP12.81□□□□□ -0.36
TNS3-204ENST00000428457 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
TNS3-204ENST00000428457 VPS8Q8N3P4 1428 aa12.8□□□□□ -0.36
TNS3-204ENST00000428457 TCERG1O14776 1098 aaKnown RBP12.79□□□□□ -0.36
TNS3-204ENST00000428457 HSCBQ8IWL3 235 aa12.78□□□□□ -0.36
TNS3-204ENST00000428457 TMF1P82094 1093 aa12.78□□□□□ -0.36
TNS3-204ENST00000428457 WASHC2CQ9Y4E1 1318 aa12.77□□□□□ -0.36
TNS3-204ENST00000428457 HDGFL2Q7Z4V5 671 aaPredicted RBP12.77□□□□□ -0.37
TNS3-204ENST00000428457 SRPK2P78362 688 aaKnown RBP12.77□□□□□ -0.37
TNS3-204ENST00000428457 KIF3BO15066 747 aa12.77□□□□□ -0.37
TNS3-204ENST00000428457 RCAN3Q9UKA8 241 aa12.76□□□□□ -0.37
TNS3-204ENST00000428457 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
TNS3-204ENST00000428457 GAPVD1Q14C86 1478 aa12.74□□□□□ -0.37
TNS3-204ENST00000428457 CHMP4BQ9H444 224 aaKnown RBP12.74□□□□□ -0.37
TNS3-204ENST00000428457 VSIG10Q8N0Z9 540 aa12.74□□□□□ -0.37
TNS3-204ENST00000428457 TIMELESSQ9UNS1 1208 aa12.74□□□□□ -0.37
TNS3-204ENST00000428457 SLC4A3P48751 1232 aa12.74□□□□□ -0.37
TNS3-204ENST00000428457 FANCIQ9NVI1 1328 aa12.73□□□□□ -0.37
TNS3-204ENST00000428457 FAM69CQ0P6D2 419 aa12.73□□□□□ -0.37
TNS3-204ENST00000428457 CASC1Q6TDU7 716 aa12.72□□□□□ -0.37
TNS3-204ENST00000428457 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
TNS3-204ENST00000428457 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
TNS3-204ENST00000428457 EIF3AQ14152 1382 aaKnown RBP12.72□□□□□ -0.37
TNS3-204ENST00000428457 GOLGA6L3A6NEY3 463 aa12.71□□□□□ -0.37
TNS3-204ENST00000428457 DCAF11Q8TEB1 546 aa12.71□□□□□ -0.37
TNS3-204ENST00000428457 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.37
TNS3-204ENST00000428457 HSP90AA2PQ14568 343 aaPredicted RBP12.7□□□□□ -0.38
TNS3-204ENST00000428457 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
TNS3-204ENST00000428457 CSB-PGBD3P0DP91 1061 aa12.7□□□□□ -0.38
TNS3-204ENST00000428457 GSE1Q14687 1217 aa12.69□□□□□ -0.38
TNS3-204ENST00000428457 ZRSR1Q15695 479 aaKnown RBP12.69□□□□□ -0.38
TNS3-204ENST00000428457 FOXD1Q16676 465 aa12.69□□□□□ -0.38
TNS3-204ENST00000428457 CCDC9Q9Y3X0 531 aaKnown RBP12.69□□□□□ -0.38
TNS3-204ENST00000428457 NUP155O75694 1391 aa12.68□□□□□ -0.38
TNS3-204ENST00000428457 RSPH6AQ9H0K4 717 aa12.68□□□□□ -0.38
TNS3-204ENST00000428457 CHAF1AQ13111 956 aaPredicted RBP12.68□□□□□ -0.38
TNS3-204ENST00000428457 TMX4Q9H1E5 349 aaPredicted RBP12.68□□□□□ -0.38
TNS3-204ENST00000428457 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
TNS3-204ENST00000428457 ANO8Q9HCE9 1232 aaPredicted RBP12.68□□□□□ -0.38
TNS3-204ENST00000428457 PKD2Q13563 968 aa12.67□□□□□ -0.38
TNS3-204ENST00000428457 USP35Q9P2H5 1018 aa12.67□□□□□ -0.38
TNS3-204ENST00000428457 GRIN2BQ13224 1484 aa12.67□□□□□ -0.38
TNS3-204ENST00000428457 UACAQ9BZF9 1416 aa12.67□□□□□ -0.38
TNS3-204ENST00000428457 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
TNS3-204ENST00000428457 MS4A1P11836 297 aa12.66□□□□□ -0.38
TNS3-204ENST00000428457 STK26Q9P289 416 aa12.66□□□□□ -0.38
TNS3-204ENST00000428457 PDE4AP27815 886 aa12.65□□□□□ -0.38
TNS3-204ENST00000428457 FGD5Q6ZNL6 1462 aa12.65□□□□□ -0.38
TNS3-204ENST00000428457 HNRNPMP52272 730 aaKnown RBP eCLIP12.65□□□□□ -0.38
TNS3-204ENST00000428457 FHOD3Q2V2M9 1422 aa12.64□□□□□ -0.39
TNS3-204ENST00000428457 GBP4Q96PP9 640 aa12.64□□□□□ -0.39
TNS3-204ENST00000428457 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
TNS3-204ENST00000428457 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.63□□□□□ -0.39
TNS3-204ENST00000428457 TAOK2Q9UL54 1235 aa12.63□□□□□ -0.39
TNS3-204ENST00000428457 CC2D2AQ9P2K1 1620 aa12.63□□□□□ -0.39
TNS3-204ENST00000428457 GOLGA2Q08379 1002 aa12.62□□□□□ -0.39
TNS3-204ENST00000428457 MORC1Q86VD1 984 aa12.62□□□□□ -0.39
TNS3-204ENST00000428457 TERF2IPQ9NYB0 399 aa12.62□□□□□ -0.39
TNS3-204ENST00000428457 U2SURPO15042 1029 aaKnown RBP12.62□□□□□ -0.39
TNS3-204ENST00000428457 MFAP1P55081 439 aaKnown RBP12.62□□□□□ -0.39
TNS3-204ENST00000428457 NGDNQ8NEJ9 315 aaKnown RBP12.61□□□□□ -0.39
TNS3-204ENST00000428457 DHX57Q6P158 1386 aaKnown RBP12.61□□□□□ -0.39
TNS3-204ENST00000428457 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
TNS3-204ENST00000428457 CALD1Q05682 793 aaKnown RBP12.6□□□□□ -0.39
TNS3-204ENST00000428457 SAFB2Q14151 953 aaKnown RBP eCLIP12.6□□□□□ -0.39
TNS3-204ENST00000428457 DRC7Q8IY82 874 aa12.6□□□□□ -0.39
TNS3-204ENST00000428457 EXOC6Q8TAG9 804 aa12.6□□□□□ -0.39
TNS3-204ENST00000428457 HMGXB3Q12766 1538 aa12.59□□□□□ -0.39
TNS3-204ENST00000428457 VGFO15240 615 aaPredicted RBP12.59□□□□□ -0.39
TNS3-204ENST00000428457 KTN1Q86UP2 1357 aaKnown RBP12.59□□□□□ -0.39
TNS3-204ENST00000428457 IL27Q8NEV9 243 aa12.59□□□□□ -0.39
TNS3-204ENST00000428457 KIAA2012Q0VF49 1180 aa12.58□□□□□ -0.39
TNS3-204ENST00000428457 PLIN1O60240 522 aa12.58□□□□□ -0.4
TNS3-204ENST00000428457 MEX3CQ5U5Q3 659 aaKnown RBP12.58□□□□□ -0.4
TNS3-204ENST00000428457 APBB1O00213 710 aa12.58□□□□□ -0.4
TNS3-204ENST00000428457 GOLGA6L4A6NEF3 574 aa12.57□□□□□ -0.4
TNS3-204ENST00000428457 SOX12O15370 315 aa12.57□□□□□ -0.4
TNS3-204ENST00000428457 PRKCSHP14314 528 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms