RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 AKNAQ7Z591 1439 aa20.07■□□□□ 0.8
NCBP2-205ENST00000428425 DENND4BO75064 1496 aaPredicted RBP20.07■□□□□ 0.8
NCBP2-205ENST00000428425 GPATCH8Q9UKJ3 1502 aaKnown RBP20.06■□□□□ 0.8
NCBP2-205ENST00000428425 CAMSAP2Q08AD1 1489 aa20.04■□□□□ 0.8
NCBP2-205ENST00000428425 PTPRGP23470 1445 aa20.04■□□□□ 0.8
NCBP2-205ENST00000428425 ERCC6L2Q5T890 1561 aa20.03■□□□□ 0.8
NCBP2-205ENST00000428425 CFDP1Q9UEE9 299 aaPredicted RBP20.03■□□□□ 0.8
NCBP2-205ENST00000428425 ITSN2Q9NZM3 1697 aa20.02■□□□□ 0.8
NCBP2-205ENST00000428425 SHROOM2Q13796 1616 aa20.02■□□□□ 0.79
NCBP2-205ENST00000428425 TRIM52Q96A61 297 aa20■□□□□ 0.79
NCBP2-205ENST00000428425 ZNF777Q9ULD5 760 aaPredicted RBP20■□□□□ 0.79
NCBP2-205ENST00000428425 PPP1R15AO75807 674 aaPredicted RBP19.99■□□□□ 0.79
NCBP2-205ENST00000428425 ROCK1Q13464 1354 aa19.99■□□□□ 0.79
NCBP2-205ENST00000428425 PLEKHD1A6NEE1 506 aa19.99■□□□□ 0.79
NCBP2-205ENST00000428425 TIMELESSQ9UNS1 1208 aa19.99■□□□□ 0.79
NCBP2-205ENST00000428425 ABCC10Q5T3U5 1492 aa19.99■□□□□ 0.79
NCBP2-205ENST00000428425 CDC42BPAQ5VT25 1732 aa19.98■□□□□ 0.79
NCBP2-205ENST00000428425 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
NCBP2-205ENST00000428425 TONSLQ96HA7 1378 aa19.96■□□□□ 0.79
NCBP2-205ENST00000428425 CYB5RLQ6IPT4 315 aa19.96■□□□□ 0.79
NCBP2-205ENST00000428425 YTHDC1Q96MU7 727 aaKnown RBP19.95■□□□□ 0.78
NCBP2-205ENST00000428425 FOXD1Q16676 465 aa19.94■□□□□ 0.78
NCBP2-205ENST00000428425 KDM5BQ9UGL1 1544 aa19.94■□□□□ 0.78
NCBP2-205ENST00000428425 ACIN1Q9UKV3 1341 aaKnown RBP19.94■□□□□ 0.78
NCBP2-205ENST00000428425 MPHOSPH9Q99550 1183 aa19.93■□□□□ 0.78
NCBP2-205ENST00000428425 CROCC2H7BZ55 1655 aa19.92■□□□□ 0.78
NCBP2-205ENST00000428425 HIRIP3Q9BW71 556 aaPredicted RBP19.91■□□□□ 0.78
NCBP2-205ENST00000428425 NCOA1Q15788 1441 aa19.9■□□□□ 0.78
NCBP2-205ENST00000428425 ADGBQ8N7X0 1667 aa19.89■□□□□ 0.77
NCBP2-205ENST00000428425 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
NCBP2-205ENST00000428425 CENPBP07199 599 aaPredicted RBP19.85■□□□□ 0.77
NCBP2-205ENST00000428425 ABCC2Q92887 1545 aa19.83■□□□□ 0.77
NCBP2-205ENST00000428425 CDC42BPBQ9Y5S2 1711 aa19.82■□□□□ 0.76
NCBP2-205ENST00000428425 PZPP20742 1482 aa19.82■□□□□ 0.76
NCBP2-205ENST00000428425 TTC37Q6PGP7 1564 aa19.81■□□□□ 0.76
NCBP2-205ENST00000428425 HNRNPMP52272 730 aaKnown RBP eCLIP19.81■□□□□ 0.76
NCBP2-205ENST00000428425 ANKRD30BQ9BXX2 1392 aa19.8■□□□□ 0.76
NCBP2-205ENST00000428425 SAMD9LQ8IVG5 1584 aa19.8■□□□□ 0.76
NCBP2-205ENST00000428425 C9orf84Q5VXU9 1444 aa19.8■□□□□ 0.76
NCBP2-205ENST00000428425 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
NCBP2-205ENST00000428425 PREX2Q70Z35 1606 aa19.8■□□□□ 0.76
NCBP2-205ENST00000428425 ANKRD30AQ9BXX3 1397 aa19.79■□□□□ 0.76
NCBP2-205ENST00000428425 MBD5Q9P267 1494 aa19.78■□□□□ 0.76
NCBP2-205ENST00000428425 DDX10Q13206 875 aaKnown RBP19.78■□□□□ 0.76
NCBP2-205ENST00000428425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.78■□□□□ 0.76
NCBP2-205ENST00000428425 SHANK2Q9UPX8 1470 aa19.77■□□□□ 0.76
NCBP2-205ENST00000428425 ANKRD50Q9ULJ7 1429 aa19.76■□□□□ 0.75
NCBP2-205ENST00000428425 L3MBTL2Q969R5 705 aa19.76■□□□□ 0.75
NCBP2-205ENST00000428425 RPRD2Q5VT52 1461 aaKnown RBP19.74■□□□□ 0.75
NCBP2-205ENST00000428425 ARHGEF5Q12774 1597 aa19.74■□□□□ 0.75
NCBP2-205ENST00000428425 ZCCHC11Q5TAX3 1644 aaKnown RBP19.73■□□□□ 0.75
NCBP2-205ENST00000428425 KCNH8Q96L42 1107 aa19.72■□□□□ 0.75
NCBP2-205ENST00000428425 ARHGAP5Q13017 1502 aa19.71■□□□□ 0.75
NCBP2-205ENST00000428425 SYCP2Q9BX26 1530 aa19.71■□□□□ 0.75
NCBP2-205ENST00000428425 TEX14Q8IWB6 1497 aa19.71■□□□□ 0.75
NCBP2-205ENST00000428425 TSPY4P0CV99 314 aa19.71■□□□□ 0.75
NCBP2-205ENST00000428425 TSPY10P0CW01 314 aa19.71■□□□□ 0.75
NCBP2-205ENST00000428425 CCDC141Q6ZP82 1450 aa19.7■□□□□ 0.74
NCBP2-205ENST00000428425 GTF3C3Q9Y5Q9 886 aa19.7■□□□□ 0.74
NCBP2-205ENST00000428425 KIF15Q9NS87 1388 aa19.69■□□□□ 0.74
NCBP2-205ENST00000428425 UHRF1BP1LA0JNW5 1464 aa19.68■□□□□ 0.74
NCBP2-205ENST00000428425 MYO5CQ9NQX4 1742 aa19.67■□□□□ 0.74
NCBP2-205ENST00000428425 PKD2Q13563 968 aa19.67■□□□□ 0.74
NCBP2-205ENST00000428425 KIAA1107Q9UPP5 1409 aa19.67■□□□□ 0.74
NCBP2-205ENST00000428425 NBPF8Q3BBV2 869 aa19.66■□□□□ 0.74
NCBP2-205ENST00000428425 NUP155O75694 1391 aa19.66■□□□□ 0.74
NCBP2-205ENST00000428425 HSPA5P11021 654 aaKnown RBP19.64■□□□□ 0.73
NCBP2-205ENST00000428425 ARHGEF12Q9NZN5 1544 aa19.63■□□□□ 0.73
NCBP2-205ENST00000428425 KDM5DQ9BY66 1539 aa19.6■□□□□ 0.73
NCBP2-205ENST00000428425 PLCH2O75038 1416 aa19.59■□□□□ 0.73
NCBP2-205ENST00000428425 MAST1Q9Y2H9 1570 aa19.58■□□□□ 0.72
NCBP2-205ENST00000428425 TRHP20396 242 aaPredicted RBP19.57■□□□□ 0.72
NCBP2-205ENST00000428425 RSPH4AQ5TD94 716 aa19.57■□□□□ 0.72
NCBP2-205ENST00000428425 WASHC2AQ641Q2 1341 aa19.56■□□□□ 0.72
NCBP2-205ENST00000428425 EIF4G2P78344 907 aaKnown RBP eCLIP19.55■□□□□ 0.72
NCBP2-205ENST00000428425 FAM135AQ9P2D6 1515 aa19.53■□□□□ 0.72
NCBP2-205ENST00000428425 PLEKHH2Q8IVE3 1493 aa19.53■□□□□ 0.72
NCBP2-205ENST00000428425 ABCC1P33527 1531 aa19.53■□□□□ 0.72
NCBP2-205ENST00000428425 C11orf95C9JLR9 678 aaPredicted RBP19.52■□□□□ 0.72
NCBP2-205ENST00000428425 PLXNC1O60486 1568 aa19.52■□□□□ 0.72
NCBP2-205ENST00000428425 TRAPPC8Q9Y2L5 1435 aa19.52■□□□□ 0.72
NCBP2-205ENST00000428425 NPM1P06748 294 aaKnown RBP eCLIP19.51■□□□□ 0.71
NCBP2-205ENST00000428425 EFCAB2Q5VUJ9 269 aa19.51■□□□□ 0.71
NCBP2-205ENST00000428425 WDR7Q9Y4E6 1490 aa19.5■□□□□ 0.71
NCBP2-205ENST00000428425 ZNF326Q5BKZ1 582 aaKnown RBP19.49■□□□□ 0.71
NCBP2-205ENST00000428425 UNC13BO14795 1591 aa19.49■□□□□ 0.71
NCBP2-205ENST00000428425 SPATA31E1Q6ZUB1 1445 aa19.48■□□□□ 0.71
NCBP2-205ENST00000428425 ANP32CO43423 234 aa19.48■□□□□ 0.71
NCBP2-205ENST00000428425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.48■□□□□ 0.712e-7■■■□□ 17.8
NCBP2-205ENST00000428425 AFAP1Q8N556 730 aa19.44■□□□□ 0.7
NCBP2-205ENST00000428425 DUOX2Q9NRD8 1548 aa19.44■□□□□ 0.7
NCBP2-205ENST00000428425 CCDC7Q96M83 1385 aa19.43■□□□□ 0.7
NCBP2-205ENST00000428425 PLA2R1Q13018 1463 aa19.42■□□□□ 0.7
NCBP2-205ENST00000428425 ASXL2Q76L83 1435 aa19.42■□□□□ 0.7
NCBP2-205ENST00000428425 ARAP3Q8WWN8 1544 aa19.42■□□□□ 0.7
NCBP2-205ENST00000428425 IQGAP3Q86VI3 1631 aa19.41■□□□□ 0.7
NCBP2-205ENST00000428425 ABCA9Q8IUA7 1624 aa19.41■□□□□ 0.7
NCBP2-205ENST00000428425 CCER2I3L3R5 266 aa19.4■□□□□ 0.7
NCBP2-205ENST00000428425 ERBINQ96RT1 1412 aa19.4■□□□□ 0.7
NCBP2-205ENST00000428425 ZFYVE16Q7Z3T8 1539 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms