RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 ROCK1Q13464 1354 aa24.94■■□□□ 1.58
PRDM5-203ENST00000428209 TRIM52Q96A61 297 aa24.94■■□□□ 1.58
PRDM5-203ENST00000428209 CAMSAP2Q08AD1 1489 aa24.93■■□□□ 1.58
PRDM5-203ENST00000428209 ZNF777Q9ULD5 760 aaPredicted RBP24.93■■□□□ 1.58
PRDM5-203ENST00000428209 KDM6BO15054 1643 aa24.92■■□□□ 1.58
PRDM5-203ENST00000428209 MIER1Q8N108 512 aa24.87■■□□□ 1.57
PRDM5-203ENST00000428209 ABCC10Q5T3U5 1492 aa24.87■■□□□ 1.57
PRDM5-203ENST00000428209 ERCC6L2Q5T890 1561 aa24.86■■□□□ 1.57
PRDM5-203ENST00000428209 PPP1R15AO75807 674 aaPredicted RBP24.86■■□□□ 1.57
PRDM5-203ENST00000428209 TONSLQ96HA7 1378 aa24.86■■□□□ 1.57
PRDM5-203ENST00000428209 CDC42BPAQ5VT25 1732 aa24.85■■□□□ 1.57
PRDM5-203ENST00000428209 ACIN1Q9UKV3 1341 aaKnown RBP24.84■■□□□ 1.57
PRDM5-203ENST00000428209 MPHOSPH9Q99550 1183 aa24.83■■□□□ 1.56
PRDM5-203ENST00000428209 OSCARQ8IYS5 282 aa24.82■■□□□ 1.56
PRDM5-203ENST00000428209 CLASP1Q7Z460 1538 aa24.82■■□□□ 1.56
PRDM5-203ENST00000428209 DENND4BO75064 1496 aaPredicted RBP24.8■■□□□ 1.56
PRDM5-203ENST00000428209 NCOA1Q15788 1441 aa24.78■■□□□ 1.56
PRDM5-203ENST00000428209 ABCC2Q92887 1545 aa24.77■■□□□ 1.56
PRDM5-203ENST00000428209 ADGBQ8N7X0 1667 aa24.76■■□□□ 1.55
PRDM5-203ENST00000428209 CROCC2H7BZ55 1655 aa24.75■■□□□ 1.55
PRDM5-203ENST00000428209 ADGRL2O95490 1459 aa24.74■■□□□ 1.55
PRDM5-203ENST00000428209 ANKRD30AQ9BXX3 1397 aa24.73■■□□□ 1.55
PRDM5-203ENST00000428209 FOXD1Q16676 465 aa24.7■■□□□ 1.54
PRDM5-203ENST00000428209 TSPY4P0CV99 314 aa24.69■■□□□ 1.54
PRDM5-203ENST00000428209 TSPY10P0CW01 314 aa24.69■■□□□ 1.54
PRDM5-203ENST00000428209 SLC4A1APQ9BWU0 796 aaKnown RBP24.69■■□□□ 1.54
PRDM5-203ENST00000428209 CENPBP07199 599 aaPredicted RBP24.68■■□□□ 1.54
PRDM5-203ENST00000428209 HNRNPMP52272 730 aaKnown RBP eCLIP24.68■■□□□ 1.54
PRDM5-203ENST00000428209 C9orf84Q5VXU9 1444 aa24.67■■□□□ 1.54
PRDM5-203ENST00000428209 SHANK2Q9UPX8 1470 aa24.66■■□□□ 1.54
PRDM5-203ENST00000428209 PREX2Q70Z35 1606 aa24.66■■□□□ 1.54
PRDM5-203ENST00000428209 CDC42BPBQ9Y5S2 1711 aa24.66■■□□□ 1.54
PRDM5-203ENST00000428209 UHRF1BP1LA0JNW5 1464 aa24.63■■□□□ 1.53
PRDM5-203ENST00000428209 ANKRD50Q9ULJ7 1429 aa24.63■■□□□ 1.53
PRDM5-203ENST00000428209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.63■■□□□ 1.53
PRDM5-203ENST00000428209 KCNH8Q96L42 1107 aa24.62■■□□□ 1.53
PRDM5-203ENST00000428209 ANKRD30BQ9BXX2 1392 aa24.62■■□□□ 1.53
PRDM5-203ENST00000428209 KDM5BQ9UGL1 1544 aa24.62■■□□□ 1.53
PRDM5-203ENST00000428209 ARHGEF5Q12774 1597 aa24.62■■□□□ 1.53
PRDM5-203ENST00000428209 MBD5Q9P267 1494 aa24.62■■□□□ 1.53
PRDM5-203ENST00000428209 TTC37Q6PGP7 1564 aa24.62■■□□□ 1.53
PRDM5-203ENST00000428209 SAMD9LQ8IVG5 1584 aa24.62■■□□□ 1.53
PRDM5-203ENST00000428209 YTHDC1Q96MU7 727 aaKnown RBP24.61■■□□□ 1.53
PRDM5-203ENST00000428209 HIRIP3Q9BW71 556 aaPredicted RBP24.6■■□□□ 1.53
PRDM5-203ENST00000428209 ZCCHC11Q5TAX3 1644 aaKnown RBP24.59■■□□□ 1.53
PRDM5-203ENST00000428209 PZPP20742 1482 aa24.59■■□□□ 1.53
PRDM5-203ENST00000428209 RSPH4AQ5TD94 716 aa24.59■■□□□ 1.53
PRDM5-203ENST00000428209 ARHGAP5Q13017 1502 aa24.58■■□□□ 1.53
PRDM5-203ENST00000428209 CCDC141Q6ZP82 1450 aa24.57■■□□□ 1.52
PRDM5-203ENST00000428209 L3MBTL2Q969R5 705 aa24.55■■□□□ 1.52
PRDM5-203ENST00000428209 RPRD2Q5VT52 1461 aaKnown RBP24.55■■□□□ 1.52
PRDM5-203ENST00000428209 MYO5CQ9NQX4 1742 aa24.54■■□□□ 1.52
PRDM5-203ENST00000428209 KIF15Q9NS87 1388 aa24.54■■□□□ 1.52
PRDM5-203ENST00000428209 DDX10Q13206 875 aaKnown RBP24.53■■□□□ 1.52
PRDM5-203ENST00000428209 SYCP2Q9BX26 1530 aa24.52■■□□□ 1.52
PRDM5-203ENST00000428209 PKD2Q13563 968 aa24.5■■□□□ 1.51
PRDM5-203ENST00000428209 SCAF1Q9H7N4 1312 aaKnown RBP24.5■■□□□ 1.51
PRDM5-203ENST00000428209 NUP155O75694 1391 aa24.49■■□□□ 1.51
PRDM5-203ENST00000428209 KIAA1107Q9UPP5 1409 aa24.49■■□□□ 1.51
PRDM5-203ENST00000428209 PLEKHH2Q8IVE3 1493 aa24.47■■□□□ 1.51
PRDM5-203ENST00000428209 PLCH2O75038 1416 aa24.47■■□□□ 1.51
PRDM5-203ENST00000428209 EFCAB2Q5VUJ9 269 aa24.44■■□□□ 1.5
PRDM5-203ENST00000428209 TEX14Q8IWB6 1497 aa24.43■■□□□ 1.5
PRDM5-203ENST00000428209 MAST1Q9Y2H9 1570 aa24.42■■□□□ 1.5
PRDM5-203ENST00000428209 KDM5DQ9BY66 1539 aa24.41■■□□□ 1.5
PRDM5-203ENST00000428209 ARHGEF12Q9NZN5 1544 aa24.39■■□□□ 1.49
PRDM5-203ENST00000428209 HSPA5P11021 654 aaKnown RBP24.38■■□□□ 1.49
PRDM5-203ENST00000428209 EIF4G2P78344 907 aaKnown RBP eCLIP24.37■■□□□ 1.49
PRDM5-203ENST00000428209 NBPF8Q3BBV2 869 aa24.36■■□□□ 1.49
PRDM5-203ENST00000428209 WDR7Q9Y4E6 1490 aa24.36■■□□□ 1.49
PRDM5-203ENST00000428209 PLXNC1O60486 1568 aa24.33■■□□□ 1.48
PRDM5-203ENST00000428209 ABCC1P33527 1531 aa24.32■■□□□ 1.48
PRDM5-203ENST00000428209 ARAP3Q8WWN8 1544 aa24.3■■□□□ 1.48
PRDM5-203ENST00000428209 FAM135AQ9P2D6 1515 aa24.3■■□□□ 1.48
PRDM5-203ENST00000428209 TRAPPC8Q9Y2L5 1435 aa24.29■■□□□ 1.48
PRDM5-203ENST00000428209 GTF3C3Q9Y5Q9 886 aa24.28■■□□□ 1.48
PRDM5-203ENST00000428209 DUOX2Q9NRD8 1548 aa24.27■■□□□ 1.48
PRDM5-203ENST00000428209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.27■■□□□ 1.48
PRDM5-203ENST00000428209 ANP32CO43423 234 aa24.26■■□□□ 1.47
PRDM5-203ENST00000428209 ASXL2Q76L83 1435 aa24.25■■□□□ 1.47
PRDM5-203ENST00000428209 UNC13BO14795 1591 aa24.25■■□□□ 1.47
PRDM5-203ENST00000428209 RIMBP3CA6NJZ7 1639 aa24.24■■□□□ 1.47
PRDM5-203ENST00000428209 RIMBP3BA6NNM3 1639 aa24.24■■□□□ 1.47
PRDM5-203ENST00000428209 RIMBP3Q9UFD9 1639 aa24.24■■□□□ 1.47
PRDM5-203ENST00000428209 NPM1P06748 294 aaKnown RBP eCLIP24.24■■□□□ 1.47
PRDM5-203ENST00000428209 WASHC2AQ641Q2 1341 aa24.24■■□□□ 1.47
PRDM5-203ENST00000428209 SPAG9O60271 1321 aaKnown RBP24.23■■□□□ 1.47
PRDM5-203ENST00000428209 ABCA9Q8IUA7 1624 aa24.23■■□□□ 1.47
PRDM5-203ENST00000428209 AFAP1Q8N556 730 aa24.23■■□□□ 1.47
PRDM5-203ENST00000428209 ERBINQ96RT1 1412 aa24.22■■□□□ 1.47
PRDM5-203ENST00000428209 ZNF326Q5BKZ1 582 aaKnown RBP24.22■■□□□ 1.47
PRDM5-203ENST00000428209 FANCAO15360 1455 aa24.21■■□□□ 1.47
PRDM5-203ENST00000428209 RTEL1-TNFRSF6BF6WH68 1400 aa24.18■■□□□ 1.46
PRDM5-203ENST00000428209 IQGAP3Q86VI3 1631 aa24.17■■□□□ 1.46
PRDM5-203ENST00000428209 SPATA31E1Q6ZUB1 1445 aa24.17■■□□□ 1.46
PRDM5-203ENST00000428209 CCER2I3L3R5 266 aa24.15■■□□□ 1.46
PRDM5-203ENST00000428209 C11orf95C9JLR9 678 aaPredicted RBP24.15■■□□□ 1.46
PRDM5-203ENST00000428209 CCDC144AA2RUR9 1427 aa24.14■■□□□ 1.46
PRDM5-203ENST00000428209 UHRF1BP1Q6BDS2 1440 aa24.14■■□□□ 1.46
PRDM5-203ENST00000428209 ZFYVE16Q7Z3T8 1539 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms