RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 STRCQ7RTU9 1775 aa17.54■□□□□ 0.4
RDH11-202ENST00000428130 ARHGEF12Q9NZN5 1544 aa17.54■□□□□ 0.4
RDH11-202ENST00000428130 CSRNP3Q8WYN3 585 aa17.53■□□□□ 0.4
RDH11-202ENST00000428130 MLECQ14165 292 aa17.51■□□□□ 0.39
RDH11-202ENST00000428130 MYO5CQ9NQX4 1742 aa17.51■□□□□ 0.39
RDH11-202ENST00000428130 CDK13Q14004 1512 aaKnown RBP17.5■□□□□ 0.39
RDH11-202ENST00000428130 SCAPERQ9BY12 1400 aa17.48■□□□□ 0.39
RDH11-202ENST00000428130 RANGAP1P46060 587 aaPredicted RBP17.48■□□□□ 0.39
RDH11-202ENST00000428130 ATP10AO60312 1499 aa17.48■□□□□ 0.39
RDH11-202ENST00000428130 PLCH2O75038 1416 aa17.47■□□□□ 0.39
RDH11-202ENST00000428130 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
RDH11-202ENST00000428130 SETD1BQ9UPS6 1966 aaKnown RBP17.46■□□□□ 0.39
RDH11-202ENST00000428130 ILDR2Q71H61 639 aa17.45■□□□□ 0.38
RDH11-202ENST00000428130 DISP3Q9P2K9 1392 aa17.44■□□□□ 0.38
RDH11-202ENST00000428130 EEA1Q15075 1411 aa17.42■□□□□ 0.38
RDH11-202ENST00000428130 C3P01024 1663 aa17.42■□□□□ 0.38
RDH11-202ENST00000428130 KDM5CP41229 1560 aa17.41■□□□□ 0.38
RDH11-202ENST00000428130 KIF14Q15058 1648 aa17.41■□□□□ 0.38
RDH11-202ENST00000428130 CEBPAP49715 358 aaPredicted RBP17.41■□□□□ 0.38
RDH11-202ENST00000428130 SPATA31D1Q6ZQQ2 1576 aa17.4■□□□□ 0.38
RDH11-202ENST00000428130 SOCS7O14512 581 aa17.4■□□□□ 0.38
RDH11-202ENST00000428130 UHRF1BP1Q6BDS2 1440 aa17.39■□□□□ 0.38
RDH11-202ENST00000428130 ZNF518AQ6AHZ1 1483 aa17.39■□□□□ 0.37
RDH11-202ENST00000428130 DIP2CQ9Y2E4 1556 aa17.39■□□□□ 0.37
RDH11-202ENST00000428130 REREQ9P2R6 1566 aa17.38■□□□□ 0.37
RDH11-202ENST00000428130 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
RDH11-202ENST00000428130 ABCA6Q8N139 1617 aa17.37■□□□□ 0.37
RDH11-202ENST00000428130 LRRIQ1Q96JM4 1722 aa17.36■□□□□ 0.37
RDH11-202ENST00000428130 EFCAB2Q5VUJ9 269 aa17.36■□□□□ 0.37
RDH11-202ENST00000428130 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
RDH11-202ENST00000428130 PTPRTO14522 1441 aa17.35■□□□□ 0.37
RDH11-202ENST00000428130 ARHGAP5Q13017 1502 aa17.34■□□□□ 0.37
RDH11-202ENST00000428130 LTBP4Q8N2S1 1624 aa17.34■□□□□ 0.37
RDH11-202ENST00000428130 FMN1Q68DA7 1419 aa17.3■□□□□ 0.36
RDH11-202ENST00000428130 ITSN2Q9NZM3 1697 aa17.3■□□□□ 0.36
RDH11-202ENST00000428130 AFAP1Q8N556 730 aa17.3■□□□□ 0.36
RDH11-202ENST00000428130 AGLP35573 1532 aa17.3■□□□□ 0.36
RDH11-202ENST00000428130 IQSEC2Q5JU85 1478 aa17.3■□□□□ 0.36
RDH11-202ENST00000428130 MLH3Q9UHC1 1453 aa17.29■□□□□ 0.36
RDH11-202ENST00000428130 TROQ12816 1431 aaPredicted RBP17.29■□□□□ 0.36
RDH11-202ENST00000428130 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
RDH11-202ENST00000428130 KIDINS220Q9ULH0 1771 aa17.28■□□□□ 0.36
RDH11-202ENST00000428130 ARHGAP35Q9NRY4 1499 aa17.27■□□□□ 0.36
RDH11-202ENST00000428130 ABCC1P33527 1531 aa17.26■□□□□ 0.35
RDH11-202ENST00000428130 ATP1B4Q9UN42 357 aaPredicted RBP17.26■□□□□ 0.35
RDH11-202ENST00000428130 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
RDH11-202ENST00000428130 TRAPPC8Q9Y2L5 1435 aa17.26■□□□□ 0.35
RDH11-202ENST00000428130 MROH2AA6NES4 1674 aa17.26■□□□□ 0.35
RDH11-202ENST00000428130 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
RDH11-202ENST00000428130 CLIP1P30622 1438 aa17.24■□□□□ 0.35
RDH11-202ENST00000428130 MYT1LQ9UL68 1186 aa17.24■□□□□ 0.35
RDH11-202ENST00000428130 CDC42BPAQ5VT25 1732 aa17.23■□□□□ 0.35
RDH11-202ENST00000428130 CAMSAP1Q5T5Y3 1602 aa17.22■□□□□ 0.35
RDH11-202ENST00000428130 SUPT6HQ7KZ85 1726 aaKnown RBP17.21■□□□□ 0.35
RDH11-202ENST00000428130 CNTLNQ9NXG0 1405 aa17.21■□□□□ 0.34
RDH11-202ENST00000428130 ZNF142P52746 1687 aaPredicted RBP17.2■□□□□ 0.34
RDH11-202ENST00000428130 ESF1Q9H501 851 aaKnown RBP17.19■□□□□ 0.34
RDH11-202ENST00000428130 NPATQ14207 1427 aa17.17■□□□□ 0.34
RDH11-202ENST00000428130 MYO3AQ8NEV4 1616 aa17.17■□□□□ 0.34
RDH11-202ENST00000428130 SAMD9LQ8IVG5 1584 aa17.16■□□□□ 0.34
RDH11-202ENST00000428130 CLTCQ00610 1675 aaKnown RBP17.16■□□□□ 0.34
RDH11-202ENST00000428130 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
RDH11-202ENST00000428130 CCDC18Q5T9S5 1454 aa17.12■□□□□ 0.33
RDH11-202ENST00000428130 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
RDH11-202ENST00000428130 CEP170BQ9Y4F5 1589 aaPredicted RBP17.11■□□□□ 0.33
RDH11-202ENST00000428130 PLA2R1Q13018 1463 aa17.11■□□□□ 0.33
RDH11-202ENST00000428130 PLXNC1O60486 1568 aa17.11■□□□□ 0.33
RDH11-202ENST00000428130 ZNF335Q9H4Z2 1342 aaPredicted RBP17.1■□□□□ 0.33
RDH11-202ENST00000428130 ZMYM3Q14202 1370 aa17.1■□□□□ 0.33
RDH11-202ENST00000428130 SYCP2Q9BX26 1530 aa17.1■□□□□ 0.33
RDH11-202ENST00000428130 NCKAP5LQ9HCH0 1330 aa17.09■□□□□ 0.33
RDH11-202ENST00000428130 TCOF1Q13428 1488 aaKnown RBP17.09■□□□□ 0.33
RDH11-202ENST00000428130 INO80Q9ULG1 1556 aaPredicted RBP17.09■□□□□ 0.33
RDH11-202ENST00000428130 ATP7AQ04656 1500 aa17.08■□□□□ 0.32
RDH11-202ENST00000428130 CASKIN1Q8WXD9 1431 aa17.08■□□□□ 0.32
RDH11-202ENST00000428130 UBAP1LF5GYI3 381 aa17.07■□□□□ 0.32
RDH11-202ENST00000428130 POLR1AO95602 1720 aaPredicted RBP17.05■□□□□ 0.32
RDH11-202ENST00000428130 PTPRKQ15262 1439 aa17.04■□□□□ 0.32
RDH11-202ENST00000428130 PKD2Q13563 968 aa17.04■□□□□ 0.32
RDH11-202ENST00000428130 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
RDH11-202ENST00000428130 SPAG9O60271 1321 aaKnown RBP17.02■□□□□ 0.32
RDH11-202ENST00000428130 GPATCH8Q9UKJ3 1502 aaKnown RBP17.02■□□□□ 0.32
RDH11-202ENST00000428130 A2MP01023 1474 aa17.02■□□□□ 0.32
RDH11-202ENST00000428130 DNMT1P26358 1616 aaKnown RBP17.02■□□□□ 0.31
RDH11-202ENST00000428130 MED1Q15648 1581 aaPredicted RBP17.02■□□□□ 0.31
RDH11-202ENST00000428130 FYCO1Q9BQS8 1478 aa17.01■□□□□ 0.31
RDH11-202ENST00000428130 ZNF777Q9ULD5 760 aaPredicted RBP17.01■□□□□ 0.31
RDH11-202ENST00000428130 KIAA1107Q9UPP5 1409 aa16.99■□□□□ 0.31
RDH11-202ENST00000428130 HNRNPMP52272 730 aaKnown RBP eCLIP16.99■□□□□ 0.31
RDH11-202ENST00000428130 NEURL4Q96JN8 1562 aa16.98■□□□□ 0.31
RDH11-202ENST00000428130 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
RDH11-202ENST00000428130 A2ML1A8K2U0 1454 aa16.98■□□□□ 0.31
RDH11-202ENST00000428130 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
RDH11-202ENST00000428130 CPS1P31327 1500 aa16.96■□□□□ 0.3
RDH11-202ENST00000428130 GGT6Q6P531 493 aa16.95■□□□□ 0.3
RDH11-202ENST00000428130 HSPA1LP34931 641 aa16.94■□□□□ 0.3
RDH11-202ENST00000428130 FOXD1Q16676 465 aa16.94■□□□□ 0.3
RDH11-202ENST00000428130 SHANK2Q9UPX8 1470 aa16.91■□□□□ 0.3
RDH11-202ENST00000428130 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
RDH11-202ENST00000428130 ALKQ9UM73 1620 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms