RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 CAMSAP2Q08AD1 1489 aa20.22■□□□□ 0.83
APOBEC3D-202ENST00000427494 PTPRGP23470 1445 aa20.22■□□□□ 0.83
APOBEC3D-202ENST00000427494 MIER1Q8N108 512 aa20.21■□□□□ 0.83
APOBEC3D-202ENST00000427494 ROCK1Q13464 1354 aa20.2■□□□□ 0.82
APOBEC3D-202ENST00000427494 PLEKHD1A6NEE1 506 aa20.19■□□□□ 0.82
APOBEC3D-202ENST00000427494 CFDP1Q9UEE9 299 aaPredicted RBP20.19■□□□□ 0.82
APOBEC3D-202ENST00000427494 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
APOBEC3D-202ENST00000427494 CDC42BPAQ5VT25 1732 aa20.17■□□□□ 0.82
APOBEC3D-202ENST00000427494 TRIM52Q96A61 297 aa20.16■□□□□ 0.82
APOBEC3D-202ENST00000427494 TONSLQ96HA7 1378 aa20.16■□□□□ 0.82
APOBEC3D-202ENST00000427494 ADGBQ8N7X0 1667 aa20.15■□□□□ 0.82
APOBEC3D-202ENST00000427494 CROCC2H7BZ55 1655 aa20.15■□□□□ 0.82
APOBEC3D-202ENST00000427494 ABCC10Q5T3U5 1492 aa20.14■□□□□ 0.81
APOBEC3D-202ENST00000427494 PPP1R15AO75807 674 aaPredicted RBP20.13■□□□□ 0.81
APOBEC3D-202ENST00000427494 ZNF777Q9ULD5 760 aaPredicted RBP20.13■□□□□ 0.81
APOBEC3D-202ENST00000427494 DENND4BO75064 1496 aaPredicted RBP20.12■□□□□ 0.81
APOBEC3D-202ENST00000427494 ERCC6L2Q5T890 1561 aa20.11■□□□□ 0.81
APOBEC3D-202ENST00000427494 CENPBP07199 599 aaPredicted RBP20.1■□□□□ 0.81
APOBEC3D-202ENST00000427494 ACIN1Q9UKV3 1341 aaKnown RBP20.08■□□□□ 0.81
APOBEC3D-202ENST00000427494 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
APOBEC3D-202ENST00000427494 MPHOSPH9Q99550 1183 aa20.07■□□□□ 0.8
APOBEC3D-202ENST00000427494 ADGRL2O95490 1459 aa20.06■□□□□ 0.8
APOBEC3D-202ENST00000427494 NCOA1Q15788 1441 aa20.04■□□□□ 0.8
APOBEC3D-202ENST00000427494 ABCC2Q92887 1545 aa20.04■□□□□ 0.8
APOBEC3D-202ENST00000427494 YTHDC1Q96MU7 727 aaKnown RBP20.03■□□□□ 0.8
APOBEC3D-202ENST00000427494 KDM5BQ9UGL1 1544 aa20.02■□□□□ 0.8
APOBEC3D-202ENST00000427494 PREX2Q70Z35 1606 aa20.01■□□□□ 0.79
APOBEC3D-202ENST00000427494 ANKRD30AQ9BXX3 1397 aa20.01■□□□□ 0.79
APOBEC3D-202ENST00000427494 SHANK2Q9UPX8 1470 aa20.01■□□□□ 0.79
APOBEC3D-202ENST00000427494 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
APOBEC3D-202ENST00000427494 CDC42BPBQ9Y5S2 1711 aa20■□□□□ 0.79
APOBEC3D-202ENST00000427494 FOXD1Q16676 465 aa19.98■□□□□ 0.79
APOBEC3D-202ENST00000427494 C9orf84Q5VXU9 1444 aa19.97■□□□□ 0.79
APOBEC3D-202ENST00000427494 ARHGEF5Q12774 1597 aa19.97■□□□□ 0.79
APOBEC3D-202ENST00000427494 TTC37Q6PGP7 1564 aa19.96■□□□□ 0.79
APOBEC3D-202ENST00000427494 SAMD9LQ8IVG5 1584 aa19.96■□□□□ 0.79
APOBEC3D-202ENST00000427494 SLC4A1APQ9BWU0 796 aaKnown RBP19.95■□□□□ 0.78
APOBEC3D-202ENST00000427494 PZPP20742 1482 aa19.95■□□□□ 0.78
APOBEC3D-202ENST00000427494 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.78
APOBEC3D-202ENST00000427494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.94■□□□□ 0.78
APOBEC3D-202ENST00000427494 ZCCHC11Q5TAX3 1644 aaKnown RBP19.93■□□□□ 0.78
APOBEC3D-202ENST00000427494 ANKRD50Q9ULJ7 1429 aa19.93■□□□□ 0.78
APOBEC3D-202ENST00000427494 HIRIP3Q9BW71 556 aaPredicted RBP19.92■□□□□ 0.78
APOBEC3D-202ENST00000427494 MBD5Q9P267 1494 aa19.92■□□□□ 0.78
APOBEC3D-202ENST00000427494 TSPY4P0CV99 314 aa19.92■□□□□ 0.78
APOBEC3D-202ENST00000427494 TSPY10P0CW01 314 aa19.92■□□□□ 0.78
APOBEC3D-202ENST00000427494 HNRNPMP52272 730 aaKnown RBP eCLIP19.92■□□□□ 0.78
APOBEC3D-202ENST00000427494 MYO5CQ9NQX4 1742 aa19.91■□□□□ 0.78
APOBEC3D-202ENST00000427494 UHRF1BP1LA0JNW5 1464 aa19.91■□□□□ 0.78
APOBEC3D-202ENST00000427494 ARHGAP5Q13017 1502 aa19.91■□□□□ 0.78
APOBEC3D-202ENST00000427494 RPRD2Q5VT52 1461 aaKnown RBP19.91■□□□□ 0.78
APOBEC3D-202ENST00000427494 CCDC141Q6ZP82 1450 aa19.91■□□□□ 0.78
APOBEC3D-202ENST00000427494 DDX10Q13206 875 aaKnown RBP19.88■□□□□ 0.77
APOBEC3D-202ENST00000427494 SYCP2Q9BX26 1530 aa19.87■□□□□ 0.77
APOBEC3D-202ENST00000427494 L3MBTL2Q969R5 705 aa19.86■□□□□ 0.77
APOBEC3D-202ENST00000427494 KIF15Q9NS87 1388 aa19.86■□□□□ 0.77
APOBEC3D-202ENST00000427494 KIAA1107Q9UPP5 1409 aa19.85■□□□□ 0.77
APOBEC3D-202ENST00000427494 TEX14Q8IWB6 1497 aa19.84■□□□□ 0.77
APOBEC3D-202ENST00000427494 KCNH8Q96L42 1107 aa19.84■□□□□ 0.77
APOBEC3D-202ENST00000427494 RSPH4AQ5TD94 716 aa19.83■□□□□ 0.77
APOBEC3D-202ENST00000427494 KDM5DQ9BY66 1539 aa19.82■□□□□ 0.76
APOBEC3D-202ENST00000427494 MAST1Q9Y2H9 1570 aa19.82■□□□□ 0.76
APOBEC3D-202ENST00000427494 PLEKHH2Q8IVE3 1493 aa19.81■□□□□ 0.76
APOBEC3D-202ENST00000427494 NUP155O75694 1391 aa19.81■□□□□ 0.76
APOBEC3D-202ENST00000427494 PKD2Q13563 968 aa19.81■□□□□ 0.76
APOBEC3D-202ENST00000427494 GTF3C3Q9Y5Q9 886 aa19.79■□□□□ 0.76
APOBEC3D-202ENST00000427494 PLCH2O75038 1416 aa19.77■□□□□ 0.75
APOBEC3D-202ENST00000427494 HSPA5P11021 654 aaKnown RBP19.76■□□□□ 0.75
APOBEC3D-202ENST00000427494 PLXNC1O60486 1568 aa19.75■□□□□ 0.75
APOBEC3D-202ENST00000427494 EIF4G2P78344 907 aaKnown RBP eCLIP19.74■□□□□ 0.75
APOBEC3D-202ENST00000427494 NBPF8Q3BBV2 869 aa19.74■□□□□ 0.75
APOBEC3D-202ENST00000427494 ARHGEF12Q9NZN5 1544 aa19.73■□□□□ 0.75
APOBEC3D-202ENST00000427494 ABCC1P33527 1531 aa19.72■□□□□ 0.75
APOBEC3D-202ENST00000427494 EFCAB2Q5VUJ9 269 aa19.71■□□□□ 0.75
APOBEC3D-202ENST00000427494 FAM135AQ9P2D6 1515 aa19.71■□□□□ 0.75
APOBEC3D-202ENST00000427494 UNC13BO14795 1591 aa19.7■□□□□ 0.74
APOBEC3D-202ENST00000427494 WDR7Q9Y4E6 1490 aa19.69■□□□□ 0.74
APOBEC3D-202ENST00000427494 ANP32CO43423 234 aa19.68■□□□□ 0.74
APOBEC3D-202ENST00000427494 ARAP3Q8WWN8 1544 aa19.67■□□□□ 0.74
APOBEC3D-202ENST00000427494 DUOX2Q9NRD8 1548 aa19.67■□□□□ 0.74
APOBEC3D-202ENST00000427494 WASHC2AQ641Q2 1341 aa19.66■□□□□ 0.74
APOBEC3D-202ENST00000427494 TRAPPC8Q9Y2L5 1435 aa19.63■□□□□ 0.73
APOBEC3D-202ENST00000427494 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
APOBEC3D-202ENST00000427494 IQGAP3Q86VI3 1631 aa19.63■□□□□ 0.73
APOBEC3D-202ENST00000427494 ABCA9Q8IUA7 1624 aa19.62■□□□□ 0.73
APOBEC3D-202ENST00000427494 ERBINQ96RT1 1412 aa19.62■□□□□ 0.73
APOBEC3D-202ENST00000427494 CCER2I3L3R5 266 aa19.61■□□□□ 0.73
APOBEC3D-202ENST00000427494 POLR1AO95602 1720 aaPredicted RBP19.6■□□□□ 0.73
APOBEC3D-202ENST00000427494 ZNF326Q5BKZ1 582 aaKnown RBP19.6■□□□□ 0.73
APOBEC3D-202ENST00000427494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.73
APOBEC3D-202ENST00000427494 SPATA31E1Q6ZUB1 1445 aa19.6■□□□□ 0.73
APOBEC3D-202ENST00000427494 ASXL2Q76L83 1435 aa19.59■□□□□ 0.73
APOBEC3D-202ENST00000427494 MAGI2Q86UL8 1455 aa19.58■□□□□ 0.73
APOBEC3D-202ENST00000427494 UHRF1BP1Q6BDS2 1440 aa19.58■□□□□ 0.73
APOBEC3D-202ENST00000427494 CCDC7Q96M83 1385 aa19.57■□□□□ 0.72
APOBEC3D-202ENST00000427494 ZFYVE16Q7Z3T8 1539 aa19.57■□□□□ 0.72
APOBEC3D-202ENST00000427494 FANCAO15360 1455 aa19.56■□□□□ 0.72
APOBEC3D-202ENST00000427494 SPAG9O60271 1321 aaKnown RBP19.56■□□□□ 0.72
APOBEC3D-202ENST00000427494 C11orf95C9JLR9 678 aaPredicted RBP19.56■□□□□ 0.72
APOBEC3D-202ENST00000427494 CNTLNQ9NXG0 1405 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms