RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 PPP1R1BQ9UD71 204 aaPredicted RBP9.77□□□□□ -0.85
LINC00649-203ENST00000427447 GBP4Q96PP9 640 aa9.76□□□□□ -0.85
LINC00649-203ENST00000427447 MRVI1Q9Y6F6 885 aa9.76□□□□□ -0.85
LINC00649-203ENST00000427447 SH3BGRP55822 239 aaPredicted RBP9.76□□□□□ -0.85
LINC00649-203ENST00000427447 CCDC70Q6NSX1 233 aa9.76□□□□□ -0.85
LINC00649-203ENST00000427447 CASC1Q6TDU7 716 aa9.75□□□□□ -0.85
LINC00649-203ENST00000427447 GIMAP7Q8NHV1 300 aa9.75□□□□□ -0.85
LINC00649-203ENST00000427447 CFAP44Q96MT7 982 aa9.75□□□□□ -0.85
LINC00649-203ENST00000427447 PLCB2Q00722 1185 aa9.75□□□□□ -0.85
LINC00649-203ENST00000427447 BBXQ8WY36 941 aaPredicted RBP9.75□□□□□ -0.85
LINC00649-203ENST00000427447 TIMELESSQ9UNS1 1208 aa9.74□□□□□ -0.85
LINC00649-203ENST00000427447 HSP90AB3PQ58FF7 597 aa9.74□□□□□ -0.85
LINC00649-203ENST00000427447 FAM193AP78312 1265 aa9.74□□□□□ -0.85
LINC00649-203ENST00000427447 TCERG1O14776 1098 aaKnown RBP9.74□□□□□ -0.85
LINC00649-203ENST00000427447 CCP110O43303 1012 aa9.74□□□□□ -0.85
LINC00649-203ENST00000427447 RSPH4AQ5TD94 716 aa9.74□□□□□ -0.85
LINC00649-203ENST00000427447 RASSF8Q8NHQ8 419 aa9.73□□□□□ -0.85
LINC00649-203ENST00000427447 ARGLU1Q9NWB6 273 aaPredicted RBP9.73□□□□□ -0.85
LINC00649-203ENST00000427447 SWAP70Q9UH65 585 aa9.73□□□□□ -0.85
LINC00649-203ENST00000427447 CTR9Q6PD62 1173 aa9.72□□□□□ -0.85
LINC00649-203ENST00000427447 GOLGA6L7A0A1B0GV03 622 aa9.72□□□□□ -0.85
LINC00649-203ENST00000427447 DNAJC2Q99543 621 aaKnown RBP9.72□□□□□ -0.85
LINC00649-203ENST00000427447 SEPT14Q6ZU15 432 aa9.71□□□□□ -0.86
LINC00649-203ENST00000427447 PLPPR3Q6T4P5 718 aa9.71□□□□□ -0.86
LINC00649-203ENST00000427447 CREBRFQ8IUR6 639 aa9.71□□□□□ -0.86
LINC00649-203ENST00000427447 VGFO15240 615 aaPredicted RBP9.7□□□□□ -0.86
LINC00649-203ENST00000427447 NAP1L1P55209 391 aaKnown RBP9.7□□□□□ -0.86
LINC00649-203ENST00000427447 LEKR1Q6ZMV7 388 aa9.7□□□□□ -0.86
LINC00649-203ENST00000427447 MPHOSPH10O00566 681 aaKnown RBP9.7□□□□□ -0.86
LINC00649-203ENST00000427447 AK7Q96M32 723 aa9.69□□□□□ -0.86
LINC00649-203ENST00000427447 FAM13BQ9NYF5 915 aa9.69□□□□□ -0.86
LINC00649-203ENST00000427447 ISY1Q9ULR0 285 aaKnown RBP9.69□□□□□ -0.86
LINC00649-203ENST00000427447 TPM4P67936 248 aa9.69□□□□□ -0.86
LINC00649-203ENST00000427447 LIG1P18858 919 aa9.69□□□□□ -0.86
LINC00649-203ENST00000427447 HSP90B2PQ58FF3 399 aa9.69□□□□□ -0.86
LINC00649-203ENST00000427447 FAM50AQ14320 339 aaKnown RBP9.69□□□□□ -0.86
LINC00649-203ENST00000427447 CALCOCO1Q9P1Z2 691 aa9.69□□□□□ -0.86
LINC00649-203ENST00000427447 DZIP1Q86YF9 867 aaKnown RBP9.68□□□□□ -0.86
LINC00649-203ENST00000427447 FAM107BQ9H098 131 aa9.68□□□□□ -0.86
LINC00649-203ENST00000427447 DIAPH3Q9NSV4 1193 aa9.68□□□□□ -0.86
LINC00649-203ENST00000427447 CPSF2Q9P2I0 782 aaKnown RBP9.67□□□□□ -0.86
LINC00649-203ENST00000427447 HNRNPUQ00839 825 aaKnown RBP eCLIP9.67□□□□□ -0.86
LINC00649-203ENST00000427447 FAM43AQ8N2R8 423 aa9.67□□□□□ -0.86
LINC00649-203ENST00000427447 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
LINC00649-203ENST00000427447 TCHPQ9BT92 498 aa9.66□□□□□ -0.86
LINC00649-203ENST00000427447 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
LINC00649-203ENST00000427447 ZNF622Q969S3 477 aaKnown RBP eCLIP9.66□□□□□ -0.86
LINC00649-203ENST00000427447 TDO2P48775 406 aa9.66□□□□□ -0.86
LINC00649-203ENST00000427447 FAM114A1Q8IWE2 563 aa9.66□□□□□ -0.86
LINC00649-203ENST00000427447 CCDC34Q96HJ3 373 aa9.66□□□□□ -0.86
LINC00649-203ENST00000427447 KIF3AQ9Y496 699 aa9.66□□□□□ -0.86
LINC00649-203ENST00000427447 SPATA24Q86W54 205 aa9.65□□□□□ -0.86
LINC00649-203ENST00000427447 DDX11Q96FC9 970 aa9.65□□□□□ -0.86
LINC00649-203ENST00000427447 HSP90AB1P08238 724 aaKnown RBP9.65□□□□□ -0.86
LINC00649-203ENST00000427447 HSCBQ8IWL3 235 aa9.65□□□□□ -0.86
LINC00649-203ENST00000427447 ANO8Q9HCE9 1232 aaPredicted RBP9.65□□□□□ -0.86
LINC00649-203ENST00000427447 TSPY4P0CV99 314 aa9.65□□□□□ -0.87
LINC00649-203ENST00000427447 TSPY10P0CW01 314 aa9.65□□□□□ -0.87
LINC00649-203ENST00000427447 PPP4R2Q9NY27 417 aa9.64□□□□□ -0.87
LINC00649-203ENST00000427447 SARNPP82979 210 aaKnown RBP9.64□□□□□ -0.87
LINC00649-203ENST00000427447 GSE1Q14687 1217 aa9.64□□□□□ -0.87
LINC00649-203ENST00000427447 KIAA1328Q86T90 577 aa9.64□□□□□ -0.87
LINC00649-203ENST00000427447 GOLIM4O00461 696 aa9.64□□□□□ -0.87
LINC00649-203ENST00000427447 RBM19Q9Y4C8 960 aaKnown RBP9.64□□□□□ -0.87
LINC00649-203ENST00000427447 GPATCH11Q8N954 259 aa9.64□□□□□ -0.87
LINC00649-203ENST00000427447 WDR66Q8TBY9 1149 aa9.63□□□□□ -0.87
LINC00649-203ENST00000427447 ERCC4Q92889 916 aaPredicted RBP9.63□□□□□ -0.87
LINC00649-203ENST00000427447 PDCL2Q8N4E4 241 aa9.63□□□□□ -0.87
LINC00649-203ENST00000427447 KIAA0754O94854 1291 aa9.63□□□□□ -0.87
LINC00649-203ENST00000427447 TPM3P06753 285 aa9.63□□□□□ -0.87
LINC00649-203ENST00000427447 CHMP4BQ9H444 224 aaKnown RBP9.62□□□□□ -0.87
LINC00649-203ENST00000427447 NPHP1O15259 732 aa9.62□□□□□ -0.87
LINC00649-203ENST00000427447 ARID4AP29374 1257 aaPredicted RBP9.62□□□□□ -0.87
LINC00649-203ENST00000427447 STK31Q9BXU1 1019 aa9.62□□□□□ -0.87
LINC00649-203ENST00000427447 SEPT6Q14141 434 aa9.62□□□□□ -0.87
LINC00649-203ENST00000427447 AEBP1Q8IUX7 1158 aa9.62□□□□□ -0.87
LINC00649-203ENST00000427447 TRIM6-TRIM34B2RNG4 842 aa9.61□□□□□ -0.87
LINC00649-203ENST00000427447 TRIM34Q9BYJ4 488 aa9.61□□□□□ -0.87
LINC00649-203ENST00000427447 LMOD3Q0VAK6 560 aa9.61□□□□□ -0.87
LINC00649-203ENST00000427447 RNF168Q8IYW5 571 aaPredicted RBP9.61□□□□□ -0.87
LINC00649-203ENST00000427447 MIPOL1Q8TD10 442 aa9.61□□□□□ -0.87
LINC00649-203ENST00000427447 ZMYND15Q9H091 742 aa9.61□□□□□ -0.87
LINC00649-203ENST00000427447 SHTN1A0MZ66 631 aa9.61□□□□□ -0.87
LINC00649-203ENST00000427447 RALBP1Q15311 655 aa9.6□□□□□ -0.87
LINC00649-203ENST00000427447 SKOR2Q2VWA4 1001 aaPredicted RBP9.6□□□□□ -0.87
LINC00649-203ENST00000427447 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.6□□□□□ -0.87
LINC00649-203ENST00000427447 ENOX2Q16206 610 aaKnown RBP9.6□□□□□ -0.87
LINC00649-203ENST00000427447 NAP1L2Q9ULW6 460 aaPredicted RBP9.6□□□□□ -0.87
LINC00649-203ENST00000427447 DDX11L8A8MPP1 907 aa9.59□□□□□ -0.87
LINC00649-203ENST00000427447 RUFY1Q96T51 708 aa9.59□□□□□ -0.87
LINC00649-203ENST00000427447 CAVIN1Q6NZI2 390 aaKnown RBP9.59□□□□□ -0.87
LINC00649-203ENST00000427447 FTSJ3Q8IY81 847 aaKnown RBP9.59□□□□□ -0.87
LINC00649-203ENST00000427447 GTF2A1P52655 376 aaPredicted RBP9.59□□□□□ -0.87
LINC00649-203ENST00000427447 MYO6Q9UM54 1294 aa9.59□□□□□ -0.87
LINC00649-203ENST00000427447 PDCL3Q9H2J4 239 aa9.59□□□□□ -0.88
LINC00649-203ENST00000427447 KNSTRNQ9Y448 316 aa9.58□□□□□ -0.88
LINC00649-203ENST00000427447 POLR3GO15318 223 aaPredicted RBP9.58□□□□□ -0.88
LINC00649-203ENST00000427447 CFAP57Q96MR6 1250 aa9.58□□□□□ -0.88
LINC00649-203ENST00000427447 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.58□□□□□ -0.88
LINC00649-203ENST00000427447 GBP2P32456 591 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms