RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 ABCC5O15440 1437 aa27.56■■■□□ 2
SNX17-202ENST00000427123 KIF14Q15058 1648 aa27.55■■■□□ 2
SNX17-202ENST00000427123 DENND4BO75064 1496 aaPredicted RBP27.54■■■□□ 2
SNX17-202ENST00000427123 CAMSAP2Q08AD1 1489 aa27.52■■■□□ 2
SNX17-202ENST00000427123 KDM5BQ9UGL1 1544 aa27.51■■□□□ 1.99
SNX17-202ENST00000427123 ADGBQ8N7X0 1667 aa27.51■■□□□ 1.99
SNX17-202ENST00000427123 GPATCH8Q9UKJ3 1502 aaKnown RBP27.49■■□□□ 1.99
SNX17-202ENST00000427123 CROCC2H7BZ55 1655 aa27.48■■□□□ 1.99
SNX17-202ENST00000427123 TRIM52Q96A61 297 aa27.48■■□□□ 1.99
SNX17-202ENST00000427123 ZNF644Q9H582 1327 aaPredicted RBP27.46■■□□□ 1.99
SNX17-202ENST00000427123 CHD1O14646 1710 aa27.45■■□□□ 1.98
SNX17-202ENST00000427123 CFDP1Q9UEE9 299 aaPredicted RBP27.42■■□□□ 1.98
SNX17-202ENST00000427123 CDC42BPAQ5VT25 1732 aa27.42■■□□□ 1.98
SNX17-202ENST00000427123 MPHOSPH9Q99550 1183 aa27.41■■□□□ 1.98
SNX17-202ENST00000427123 ATP10BO94823 1461 aa27.41■■□□□ 1.98
SNX17-202ENST00000427123 ADGRL2O95490 1459 aa27.4■■□□□ 1.98
SNX17-202ENST00000427123 ABCC10Q5T3U5 1492 aa27.38■■□□□ 1.97
SNX17-202ENST00000427123 SHROOM2Q13796 1616 aa27.35■■□□□ 1.97
SNX17-202ENST00000427123 PLEKHD1A6NEE1 506 aa27.34■■□□□ 1.97
SNX17-202ENST00000427123 DDX10Q13206 875 aaKnown RBP27.34■■□□□ 1.97
SNX17-202ENST00000427123 NCOA1Q15788 1441 aa27.33■■□□□ 1.97
SNX17-202ENST00000427123 PTPRGP23470 1445 aa27.32■■□□□ 1.96
SNX17-202ENST00000427123 SHANK2Q9UPX8 1470 aa27.3■■□□□ 1.96
SNX17-202ENST00000427123 ANKRD30BQ9BXX2 1392 aa27.29■■□□□ 1.96
SNX17-202ENST00000427123 RPRD2Q5VT52 1461 aaKnown RBP27.28■■□□□ 1.96
SNX17-202ENST00000427123 HIRIP3Q9BW71 556 aaPredicted RBP27.27■■□□□ 1.96
SNX17-202ENST00000427123 ANKRD30AQ9BXX3 1397 aa27.26■■□□□ 1.95
SNX17-202ENST00000427123 ZNF777Q9ULD5 760 aaPredicted RBP27.26■■□□□ 1.95
SNX17-202ENST00000427123 PZPP20742 1482 aa27.26■■□□□ 1.95
SNX17-202ENST00000427123 ARHGEF5Q12774 1597 aa27.21■■□□□ 1.95
SNX17-202ENST00000427123 TEX14Q8IWB6 1497 aa27.21■■□□□ 1.95
SNX17-202ENST00000427123 SLC4A1APQ9BWU0 796 aaKnown RBP27.21■■□□□ 1.95
SNX17-202ENST00000427123 PREX2Q70Z35 1606 aa27.2■■□□□ 1.94
SNX17-202ENST00000427123 FOXD1Q16676 465 aa27.2■■□□□ 1.94
SNX17-202ENST00000427123 C9orf84Q5VXU9 1444 aa27.18■■□□□ 1.94
SNX17-202ENST00000427123 L3MBTL2Q969R5 705 aa27.16■■□□□ 1.94
SNX17-202ENST00000427123 ANKRD50Q9ULJ7 1429 aa27.15■■□□□ 1.94
SNX17-202ENST00000427123 CDC42BPBQ9Y5S2 1711 aa27.15■■□□□ 1.94
SNX17-202ENST00000427123 KIAA1107Q9UPP5 1409 aa27.13■■□□□ 1.93
SNX17-202ENST00000427123 CCER2I3L3R5 266 aa27.12■■□□□ 1.93
SNX17-202ENST00000427123 ANP32CO43423 234 aa27.12■■□□□ 1.93
SNX17-202ENST00000427123 SAMD9LQ8IVG5 1584 aa27.12■■□□□ 1.93
SNX17-202ENST00000427123 ABCC2Q92887 1545 aa27.12■■□□□ 1.93
SNX17-202ENST00000427123 KCNH8Q96L42 1107 aa27.11■■□□□ 1.93
SNX17-202ENST00000427123 KDM5DQ9BY66 1539 aa27.1■■□□□ 1.93
SNX17-202ENST00000427123 HSPA5P11021 654 aaKnown RBP27.09■■□□□ 1.93
SNX17-202ENST00000427123 MBD5Q9P267 1494 aa27.09■■□□□ 1.93
SNX17-202ENST00000427123 EIF4G2P78344 907 aaKnown RBP eCLIP27.09■■□□□ 1.93
SNX17-202ENST00000427123 ERCC6L2Q5T890 1561 aa27.09■■□□□ 1.93
SNX17-202ENST00000427123 CCDC141Q6ZP82 1450 aa27.07■■□□□ 1.92
SNX17-202ENST00000427123 CLASP1Q7Z460 1538 aa27.07■■□□□ 1.92
SNX17-202ENST00000427123 PELP1Q8IZL8 1130 aaKnown RBP27.06■■□□□ 1.92
SNX17-202ENST00000427123 TTC37Q6PGP7 1564 aa27.05■■□□□ 1.92
SNX17-202ENST00000427123 TSPY4P0CV99 314 aa27.05■■□□□ 1.92
SNX17-202ENST00000427123 TSPY10P0CW01 314 aa27.05■■□□□ 1.92
SNX17-202ENST00000427123 MYO5CQ9NQX4 1742 aa27.02■■□□□ 1.92
SNX17-202ENST00000427123 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.02■■□□□ 1.92
SNX17-202ENST00000427123 KIF15Q9NS87 1388 aa27.01■■□□□ 1.92
SNX17-202ENST00000427123 MAST1Q9Y2H9 1570 aa27■■□□□ 1.91
SNX17-202ENST00000427123 WASHC2AQ641Q2 1341 aa27■■□□□ 1.91
SNX17-202ENST00000427123 POLR1AO95602 1720 aaPredicted RBP27■■□□□ 1.91
SNX17-202ENST00000427123 HNRNPMP52272 730 aaKnown RBP eCLIP26.99■■□□□ 1.91
SNX17-202ENST00000427123 PKD2Q13563 968 aa26.99■■□□□ 1.91
SNX17-202ENST00000427123 NBPF8Q3BBV2 869 aa26.99■■□□□ 1.91
SNX17-202ENST00000427123 RSPH4AQ5TD94 716 aa26.99■■□□□ 1.91
SNX17-202ENST00000427123 ARHGAP5Q13017 1502 aa26.98■■□□□ 1.91
SNX17-202ENST00000427123 SYCP2Q9BX26 1530 aa26.97■■□□□ 1.91
SNX17-202ENST00000427123 NUP155O75694 1391 aa26.97■■□□□ 1.91
SNX17-202ENST00000427123 UHRF1BP1LA0JNW5 1464 aa26.95■■□□□ 1.91
SNX17-202ENST00000427123 ZCCHC11Q5TAX3 1644 aaKnown RBP26.94■■□□□ 1.9
SNX17-202ENST00000427123 PLEKHH2Q8IVE3 1493 aa26.94■■□□□ 1.9
SNX17-202ENST00000427123 CNTLNQ9NXG0 1405 aa26.93■■□□□ 1.9
SNX17-202ENST00000427123 SPATA31E1Q6ZUB1 1445 aa26.92■■□□□ 1.9
SNX17-202ENST00000427123 PLXNC1O60486 1568 aa26.91■■□□□ 1.9
SNX17-202ENST00000427123 CCDC7Q96M83 1385 aa26.9■■□□□ 1.9
SNX17-202ENST00000427123 ARHGEF12Q9NZN5 1544 aa26.9■■□□□ 1.9
SNX17-202ENST00000427123 UNC13BO14795 1591 aa26.88■■□□□ 1.89
SNX17-202ENST00000427123 FAM135AQ9P2D6 1515 aa26.86■■□□□ 1.89
SNX17-202ENST00000427123 UHRF1BP1Q6BDS2 1440 aa26.84■■□□□ 1.89
SNX17-202ENST00000427123 SUPT16HQ9Y5B9 1047 aaKnown RBP26.81■■□□□ 1.88
SNX17-202ENST00000427123 RALGAPBQ86X10 1494 aa26.8■■□□□ 1.88
SNX17-202ENST00000427123 PLCH2O75038 1416 aa26.8■■□□□ 1.88
SNX17-202ENST00000427123 C11orf95C9JLR9 678 aaPredicted RBP26.8■■□□□ 1.88
SNX17-202ENST00000427123 KDM5CP41229 1560 aa26.79■■□□□ 1.88
SNX17-202ENST00000427123 ABCC1P33527 1531 aa26.77■■□□□ 1.88
SNX17-202ENST00000427123 IQGAP3Q86VI3 1631 aa26.77■■□□□ 1.88
SNX17-202ENST00000427123 DUOX2Q9NRD8 1548 aa26.76■■□□□ 1.87
SNX17-202ENST00000427123 KIF7Q2M1P5 1343 aa26.76■■□□□ 1.87
SNX17-202ENST00000427123 USP47Q96K76 1375 aa26.75■■□□□ 1.87
SNX17-202ENST00000427123 ARAP3Q8WWN8 1544 aa26.73■■□□□ 1.87
SNX17-202ENST00000427123 ERBINQ96RT1 1412 aa26.71■■□□□ 1.87
SNX17-202ENST00000427123 BCORL1Q5H9F3 1711 aa26.71■■□□□ 1.87
SNX17-202ENST00000427123 MAGI2Q86UL8 1455 aa26.71■■□□□ 1.87
SNX17-202ENST00000427123 ZNF326Q5BKZ1 582 aaKnown RBP26.7■■□□□ 1.86
SNX17-202ENST00000427123 EFCAB2Q5VUJ9 269 aa26.69■■□□□ 1.86
SNX17-202ENST00000427123 CCDC144AA2RUR9 1427 aa26.66■■□□□ 1.86
SNX17-202ENST00000427123 ARID4BQ4LE39 1312 aaPredicted RBP26.65■■□□□ 1.86
SNX17-202ENST00000427123 PRKRIP1Q9H875 184 aaPredicted RBP26.65■■□□□ 1.86
SNX17-202ENST00000427123 WDR7Q9Y4E6 1490 aa26.61■■□□□ 1.85
SNX17-202ENST00000427123 PLA2R1Q13018 1463 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms