RNA–Protein interactions for RNA: ENST00000424998.3

CNKSR3-201, Transcript of CNKSR family member 3, humanhuman

TSL 5

Gene CNKSR3, Length 536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-201ENST00000424998 BMP2KQ9NSY1 1161 aaPredicted RBP6.78□□□□□ -1.32
CNKSR3-201ENST00000424998 WDR70Q9NW82 654 aa6.78□□□□□ -1.32
CNKSR3-201ENST00000424998 NBR1Q14596 966 aa6.77□□□□□ -1.33
CNKSR3-201ENST00000424998 TRIM35Q9UPQ4 493 aa6.77□□□□□ -1.33
CNKSR3-201ENST00000424998 CLCN6P51797 869 aa6.76□□□□□ -1.33
CNKSR3-201ENST00000424998 CYB5RLQ6IPT4 315 aa6.76□□□□□ -1.33
CNKSR3-201ENST00000424998 CADPS2Q86UW7 1296 aa6.76□□□□□ -1.33
CNKSR3-201ENST00000424998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.75□□□□□ -1.332e-7■■□□□ 13.1
CNKSR3-201ENST00000424998 CADPSQ9ULU8 1353 aa6.74□□□□□ -1.33
CNKSR3-201ENST00000424998 MS4A4AQ96JQ5 239 aa6.74□□□□□ -1.33
CNKSR3-201ENST00000424998 ATN1P54259 1190 aaPredicted RBP6.73□□□□□ -1.33
CNKSR3-201ENST00000424998 MROH2BQ7Z745 1585 aa6.73□□□□□ -1.33
CNKSR3-201ENST00000424998 ARAP1Q96P48 1450 aa6.73□□□□□ -1.33
CNKSR3-201ENST00000424998 PEG3Q9GZU2 1588 aa6.72□□□□□ -1.33
CNKSR3-201ENST00000424998 CEP164Q9UPV0 1460 aa6.72□□□□□ -1.33
CNKSR3-201ENST00000424998 GABBR2O75899 941 aa6.71□□□□□ -1.34
CNKSR3-201ENST00000424998 URB2Q14146 1524 aaKnown RBP6.71□□□□□ -1.34
CNKSR3-201ENST00000424998 ZNF608Q9ULD9 1512 aaPredicted RBP6.71□□□□□ -1.34
CNKSR3-201ENST00000424998 ATMINO43313 823 aaPredicted RBP6.7□□□□□ -1.34
CNKSR3-201ENST00000424998 DCBLD2Q96PD2 775 aa6.7□□□□□ -1.34
CNKSR3-201ENST00000424998 FANCD2Q9BXW9 1451 aa6.7□□□□□ -1.34
CNKSR3-201ENST00000424998 P3H3Q8IVL6 736 aa6.69□□□□□ -1.34
CNKSR3-201ENST00000424998 G3V3G9 751 aa6.68□□□□□ -1.34
CNKSR3-201ENST00000424998 DPY19L2Q6NUT2 758 aa6.68□□□□□ -1.34
CNKSR3-201ENST00000424998 LARP6Q9BRS8 491 aaKnown RBP6.68□□□□□ -1.34
CNKSR3-201ENST00000424998 PDE4AP27815 886 aa6.67□□□□□ -1.34
CNKSR3-201ENST00000424998 ASTLQ6HA08 431 aaPredicted RBP6.67□□□□□ -1.34
CNKSR3-201ENST00000424998 SEC24BO95487 1268 aa6.66□□□□□ -1.34
CNKSR3-201ENST00000424998 PLCG2P16885 1265 aa6.66□□□□□ -1.34
CNKSR3-201ENST00000424998 PRKCSHP14314 528 aaPredicted RBP6.65□□□□□ -1.34
CNKSR3-201ENST00000424998 ILDR1Q86SU0 546 aaPredicted RBP6.65□□□□□ -1.34
CNKSR3-201ENST00000424998 KCNV2Q8TDN2 545 aa6.65□□□□□ -1.34
CNKSR3-201ENST00000424998 TPRNQ4KMQ1 711 aa6.64□□□□□ -1.35
CNKSR3-201ENST00000424998 IER5LQ5T953 404 aa6.64□□□□□ -1.35
CNKSR3-201ENST00000424998 OCEL1Q9H607 264 aa6.64□□□□□ -1.35
CNKSR3-201ENST00000424998 NCKAP5LQ9HCH0 1330 aa6.64□□□□□ -1.35
CNKSR3-201ENST00000424998 WIZO95785 1651 aa6.64□□□□□ -1.35
CNKSR3-201ENST00000424998 CHD1O14646 1710 aa6.63□□□□□ -1.35
CNKSR3-201ENST00000424998 IRX5P78411 483 aaPredicted RBP6.63□□□□□ -1.35
CNKSR3-201ENST00000424998 E2F4Q16254 413 aa6.63□□□□□ -1.35
CNKSR3-201ENST00000424998 PDCD7Q8N8D1 485 aaKnown RBP6.63□□□□□ -1.35
CNKSR3-201ENST00000424998 DDX27Q96GQ7 796 aaKnown RBP6.63□□□□□ -1.35
CNKSR3-201ENST00000424998 MICALL2Q8IY33 904 aa6.62□□□□□ -1.35
CNKSR3-201ENST00000424998 EIF4G3O43432 1585 aaKnown RBP6.61□□□□□ -1.35
CNKSR3-201ENST00000424998 PELP1Q8IZL8 1130 aaKnown RBP6.61□□□□□ -1.35
CNKSR3-201ENST00000424998 CRISPLD2Q9H0B8 497 aa6.61□□□□□ -1.35
CNKSR3-201ENST00000424998 BOLA1Q9Y3E2 137 aa6.61□□□□□ -1.35
CNKSR3-201ENST00000424998 SP7Q8TDD2 431 aaPredicted RBP6.6□□□□□ -1.35
CNKSR3-201ENST00000424998 TMC2Q8TDI7 906 aa6.6□□□□□ -1.35
CNKSR3-201ENST00000424998 CFTRP13569 1480 aa6.6□□□□□ -1.35
CNKSR3-201ENST00000424998 SLC39A7Q92504 469 aa6.59□□□□□ -1.35
CNKSR3-201ENST00000424998 MFSD10Q14728 455 aa6.58□□□□□ -1.36
CNKSR3-201ENST00000424998 PPP1R15BQ5SWA1 713 aa6.58□□□□□ -1.36
CNKSR3-201ENST00000424998 ARHGEF1Q92888 912 aaKnown RBP6.58□□□□□ -1.36
CNKSR3-201ENST00000424998 L3MBTL3Q96JM7 780 aaPredicted RBP6.58□□□□□ -1.36
CNKSR3-201ENST00000424998 COLQQ9Y215 455 aaPredicted RBP6.58□□□□□ -1.36
CNKSR3-201ENST00000424998 AQRO60306 1485 aaKnown RBP eCLIP6.58□□□□□ -1.36
CNKSR3-201ENST00000424998 C7P10643 843 aa6.57□□□□□ -1.36
CNKSR3-201ENST00000424998 GPHNQ9NQX3 736 aaPredicted RBP6.57□□□□□ -1.36
CNKSR3-201ENST00000424998 METRNQ9UJH8 293 aa6.57□□□□□ -1.36
CNKSR3-201ENST00000424998 IFT140Q96RY7 1462 aa6.57□□□□□ -1.36
CNKSR3-201ENST00000424998 TULP1O00294 542 aaPredicted RBP6.55□□□□□ -1.36
CNKSR3-201ENST00000424998 DSG2Q14126 1118 aa6.55□□□□□ -1.36
CNKSR3-201ENST00000424998 RSF1Q96T23 1441 aaPredicted RBP6.55□□□□□ -1.36
CNKSR3-201ENST00000424998 C2orf72A6NCS6 295 aa6.54□□□□□ -1.36
CNKSR3-201ENST00000424998 POTEIP0CG38 1075 aa6.54□□□□□ -1.36
CNKSR3-201ENST00000424998 TOPBP1Q92547 1522 aa6.54□□□□□ -1.36
CNKSR3-201ENST00000424998 SEMA3EO15041 775 aa6.53□□□□□ -1.36
CNKSR3-201ENST00000424998 C3orf67Q6ZVT6 689 aa6.53□□□□□ -1.36
CNKSR3-201ENST00000424998 PLPP6Q8IY26 295 aa6.53□□□□□ -1.36
CNKSR3-201ENST00000424998 TMEM121BQ9BXQ6 578 aaPredicted RBP6.53□□□□□ -1.36
CNKSR3-201ENST00000424998 CLASP1Q7Z460 1538 aa6.52□□□□□ -1.37
CNKSR3-201ENST00000424998 POTEFA5A3E0 1075 aa6.52□□□□□ -1.37
CNKSR3-201ENST00000424998 FOXK1P85037 733 aa6.51□□□□□ -1.37
CNKSR3-201ENST00000424998 CAMK2BQ13554 666 aa6.51□□□□□ -1.37
CNKSR3-201ENST00000424998 LMOD2Q6P5Q4 547 aa6.51□□□□□ -1.37
CNKSR3-201ENST00000424998 TARBP1Q13395 1621 aaKnown RBP6.5□□□□□ -1.37
CNKSR3-201ENST00000424998 DPYSL4O14531 572 aa6.5□□□□□ -1.37
CNKSR3-201ENST00000424998 ERCC6L2Q5T890 1561 aa6.49□□□□□ -1.37
CNKSR3-201ENST00000424998 SNAPC4Q5SXM2 1469 aa6.49□□□□□ -1.37
CNKSR3-201ENST00000424998 RAD54L2Q9Y4B4 1467 aa6.49□□□□□ -1.37
CNKSR3-201ENST00000424998 KDM4FA0A1W2PPD8 638 aa6.49□□□□□ -1.37
CNKSR3-201ENST00000424998 TMEM92Q6UXU6 159 aa6.49□□□□□ -1.37
CNKSR3-201ENST00000424998 UPF1Q92900 1129 aaKnown RBP eCLIP6.49□□□□□ -1.37
CNKSR3-201ENST00000424998 EMILIN3Q9NT22 766 aa6.49□□□□□ -1.37
CNKSR3-201ENST00000424998 GAPVD1Q14C86 1478 aa6.48□□□□□ -1.37
CNKSR3-201ENST00000424998 TDRD9Q8NDG6 1382 aaKnown RBP6.48□□□□□ -1.37
CNKSR3-201ENST00000424998 MAP3K9P80192 1104 aa6.48□□□□□ -1.37
CNKSR3-201ENST00000424998 SMYD5Q6GMV2 418 aa6.48□□□□□ -1.37
CNKSR3-201ENST00000424998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.48□□□□□ -1.37
CNKSR3-201ENST00000424998 TESPA1A2RU30 521 aaPredicted RBP6.47□□□□□ -1.37
CNKSR3-201ENST00000424998 KIF3CO14782 793 aa6.47□□□□□ -1.37
CNKSR3-201ENST00000424998 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.47□□□□□ -1.37
CNKSR3-201ENST00000424998 PRDM2Q13029 1718 aa6.47□□□□□ -1.37
CNKSR3-201ENST00000424998 TOP2AP11388 1531 aaKnown RBP6.46□□□□□ -1.37
CNKSR3-201ENST00000424998 DNMBPQ6XZF7 1577 aa6.46□□□□□ -1.38
CNKSR3-201ENST00000424998 POLA1P09884 1462 aaPredicted RBP6.46□□□□□ -1.38
CNKSR3-201ENST00000424998 ARIH1Q9Y4X5 557 aaPredicted RBP6.45□□□□□ -1.38
CNKSR3-201ENST00000424998 KIF13AQ9H1H9 1805 aa6.44□□□□□ -1.38
CNKSR3-201ENST00000424998 SPDYE16A6NNV3 312 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms