RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 MAPK8IP3Q9UPT6 1336 aa14.16□□□□□ -0.14
TNC-203ENST00000423613 SIN3AQ96ST3 1273 aa14.15□□□□□ -0.14
TNC-203ENST00000423613 GOLGA6L3A6NEY3 463 aa14.13□□□□□ -0.15
TNC-203ENST00000423613 FRAT1Q92837 279 aaPredicted RBP14.12□□□□□ -0.15
TNC-203ENST00000423613 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
TNC-203ENST00000423613 WRNQ14191 1432 aaPredicted RBP eCLIP14.12□□□□□ -0.15
TNC-203ENST00000423613 TMX4Q9H1E5 349 aaPredicted RBP14.12□□□□□ -0.15
TNC-203ENST00000423613 KCNJ4P48050 445 aa14.11□□□□□ -0.15
TNC-203ENST00000423613 TAF7LQ5H9L4 462 aa14.11□□□□□ -0.15
TNC-203ENST00000423613 PRM3Q9NNZ6 103 aa14.11□□□□□ -0.15
TNC-203ENST00000423613 CC2D1BQ5T0F9 858 aaKnown RBP14.1□□□□□ -0.15
TNC-203ENST00000423613 TNIKQ9UKE5 1360 aa14.1□□□□□ -0.15
TNC-203ENST00000423613 ZNF330Q9Y3S2 320 aaPredicted RBP14.1□□□□□ -0.15
TNC-203ENST00000423613 PDE4CQ08493 712 aa14.09□□□□□ -0.15
TNC-203ENST00000423613 NUDCQ9Y266 331 aa14.09□□□□□ -0.15
TNC-203ENST00000423613 U2SURPO15042 1029 aaKnown RBP14.08□□□□□ -0.16
TNC-203ENST00000423613 ERCC6Q03468 1493 aa14.08□□□□□ -0.16
TNC-203ENST00000423613 CEP164Q9UPV0 1460 aa14.07□□□□□ -0.16
TNC-203ENST00000423613 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
TNC-203ENST00000423613 PRKCSHP14314 528 aaPredicted RBP14.07□□□□□ -0.16
TNC-203ENST00000423613 CSB-PGBD3P0DP91 1061 aa14.06□□□□□ -0.16
TNC-203ENST00000423613 SLKQ9H2G2 1235 aaPredicted RBP14.05□□□□□ -0.16
TNC-203ENST00000423613 PAK3O75914 559 aaPredicted RBP14.05□□□□□ -0.16
TNC-203ENST00000423613 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
TNC-203ENST00000423613 GBP4Q96PP9 640 aa14.03□□□□□ -0.16
TNC-203ENST00000423613 G3V3G9 751 aa14.02□□□□□ -0.16
TNC-203ENST00000423613 DCAF8Q5TAQ9 597 aa14.02□□□□□ -0.16
TNC-203ENST00000423613 SAFB2Q14151 953 aaKnown RBP eCLIP14.02□□□□□ -0.17
TNC-203ENST00000423613 AEBP2Q6ZN18 517 aaPredicted RBP14.01□□□□□ -0.17
TNC-203ENST00000423613 BAZ1BQ9UIG0 1483 aaKnown RBP14□□□□□ -0.17
TNC-203ENST00000423613 CHMP4BQ9H444 224 aaKnown RBP14□□□□□ -0.17
TNC-203ENST00000423613 MS4A1P11836 297 aa14□□□□□ -0.17
TNC-203ENST00000423613 RB1CC1Q8TDY2 1594 aa13.99□□□□□ -0.17
TNC-203ENST00000423613 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
TNC-203ENST00000423613 TSHZ2Q9NRE2 1034 aa13.99□□□□□ -0.17
TNC-203ENST00000423613 FAM13BQ9NYF5 915 aa13.99□□□□□ -0.17
TNC-203ENST00000423613 DCAF11Q8TEB1 546 aa13.98□□□□□ -0.17
TNC-203ENST00000423613 USP35Q9P2H5 1018 aa13.98□□□□□ -0.17
TNC-203ENST00000423613 TMF1P82094 1093 aa13.98□□□□□ -0.17
TNC-203ENST00000423613 CCNB3Q8WWL7 1395 aa13.97□□□□□ -0.17
TNC-203ENST00000423613 GNL2Q13823 731 aaKnown RBP13.97□□□□□ -0.17
TNC-203ENST00000423613 RTF1Q92541 710 aaKnown RBP13.95□□□□□ -0.18
TNC-203ENST00000423613 KRI1Q8N9T8 703 aaKnown RBP13.95□□□□□ -0.18
TNC-203ENST00000423613 ANO8Q9HCE9 1232 aaPredicted RBP13.94□□□□□ -0.18
TNC-203ENST00000423613 STK26Q9P289 416 aa13.94□□□□□ -0.18
TNC-203ENST00000423613 SYAP1Q96A49 352 aaPredicted RBP13.94□□□□□ -0.18
TNC-203ENST00000423613 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
TNC-203ENST00000423613 MCCP23508 829 aa13.93□□□□□ -0.18
TNC-203ENST00000423613 TPM4P67936 248 aa13.93□□□□□ -0.18
TNC-203ENST00000423613 CCAR2Q8N163 923 aaKnown RBP13.92□□□□□ -0.18
TNC-203ENST00000423613 IPO9Q96P70 1041 aaKnown RBP13.92□□□□□ -0.18
TNC-203ENST00000423613 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
TNC-203ENST00000423613 HSPA5P11021 654 aaKnown RBP13.91□□□□□ -0.18
TNC-203ENST00000423613 KANK1Q14678 1352 aa13.91□□□□□ -0.18
TNC-203ENST00000423613 APBB1O00213 710 aa13.9□□□□□ -0.18
TNC-203ENST00000423613 GGT6Q6P531 493 aa13.9□□□□□ -0.18
TNC-203ENST00000423613 MORC1Q86VD1 984 aa13.9□□□□□ -0.18
TNC-203ENST00000423613 FHAD1B1AJZ9 1412 aa13.9□□□□□ -0.18
TNC-203ENST00000423613 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
TNC-203ENST00000423613 MSH5O43196 834 aa13.9□□□□□ -0.18
TNC-203ENST00000423613 NOM1Q5C9Z4 860 aaKnown RBP13.89□□□□□ -0.19
TNC-203ENST00000423613 TEX35Q5T0J7 233 aa13.89□□□□□ -0.19
TNC-203ENST00000423613 RRP12Q5JTH9 1297 aaKnown RBP13.89□□□□□ -0.19
TNC-203ENST00000423613 EIF4G1Q04637 1599 aaKnown RBP13.88□□□□□ -0.19
TNC-203ENST00000423613 CREBRFQ8IUR6 639 aa13.88□□□□□ -0.19
TNC-203ENST00000423613 CHMP3Q9Y3E7 222 aa13.88□□□□□ -0.19
TNC-203ENST00000423613 HSP90B1P14625 803 aaKnown RBP13.88□□□□□ -0.19
TNC-203ENST00000423613 ZNF592Q92610 1267 aa13.88□□□□□ -0.19
TNC-203ENST00000423613 GPS2Q13227 327 aa13.87□□□□□ -0.19
TNC-203ENST00000423613 CALD1Q05682 793 aaKnown RBP13.87□□□□□ -0.19
TNC-203ENST00000423613 SETD5Q9C0A6 1442 aa13.86□□□□□ -0.19
TNC-203ENST00000423613 GSE1Q14687 1217 aa13.86□□□□□ -0.19
TNC-203ENST00000423613 PHF23Q9BUL5 403 aaPredicted RBP13.85□□□□□ -0.19
TNC-203ENST00000423613 GORABQ5T7V8 394 aa13.85□□□□□ -0.19
TNC-203ENST00000423613 HTATSF1O43719 755 aaKnown RBP13.85□□□□□ -0.19
TNC-203ENST00000423613 KTN1Q86UP2 1357 aaKnown RBP13.85□□□□□ -0.19
TNC-203ENST00000423613 TPM3P06753 285 aa13.85□□□□□ -0.19
TNC-203ENST00000423613 MEX3CQ5U5Q3 659 aaKnown RBP13.84□□□□□ -0.19
TNC-203ENST00000423613 CARMIL1Q5VZK9 1371 aa13.84□□□□□ -0.19
TNC-203ENST00000423613 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
TNC-203ENST00000423613 FOXD1Q16676 465 aa13.84□□□□□ -0.19
TNC-203ENST00000423613 SOGA1O94964 1423 aa13.84□□□□□ -0.19
TNC-203ENST00000423613 VPS53Q5VIR6 699 aa13.84□□□□□ -0.19
TNC-203ENST00000423613 PLCD4Q9BRC7 762 aa13.84□□□□□ -0.19
TNC-203ENST00000423613 MAP7D2Q96T17 732 aa13.83□□□□□ -0.2
TNC-203ENST00000423613 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
TNC-203ENST00000423613 GTF2E1P29083 439 aaPredicted RBP13.82□□□□□ -0.2
TNC-203ENST00000423613 BCL11BQ9C0K0 894 aaPredicted RBP13.82□□□□□ -0.2
TNC-203ENST00000423613 PKD2Q13563 968 aa13.82□□□□□ -0.2
TNC-203ENST00000423613 CUX2O14529 1486 aa13.82□□□□□ -0.2
TNC-203ENST00000423613 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
TNC-203ENST00000423613 FOXD4L4Q8WXT5 416 aaPredicted RBP13.82□□□□□ -0.2
TNC-203ENST00000423613 HDGFL2Q7Z4V5 671 aaPredicted RBP13.82□□□□□ -0.2
TNC-203ENST00000423613 ARHGAP35Q9NRY4 1499 aa13.81□□□□□ -0.2
TNC-203ENST00000423613 MFAP1P55081 439 aaKnown RBP13.81□□□□□ -0.2
TNC-203ENST00000423613 FRAT2O75474 233 aaPredicted RBP13.8□□□□□ -0.2
TNC-203ENST00000423613 RCAN3Q9UKA8 241 aa13.8□□□□□ -0.2
TNC-203ENST00000423613 HSP90AB3PQ58FF7 597 aa13.79□□□□□ -0.2
TNC-203ENST00000423613 NACADO15069 1562 aa13.79□□□□□ -0.2
TNC-203ENST00000423613 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms