RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 TONSLQ96HA7 1378 aa19.81■□□□□ 0.76
CDCA3-202ENST00000422785 GPATCH8Q9UKJ3 1502 aaKnown RBP19.81■□□□□ 0.76
CDCA3-202ENST00000422785 KIF14Q15058 1648 aa19.81■□□□□ 0.76
CDCA3-202ENST00000422785 CHD1O14646 1710 aa19.8■□□□□ 0.76
CDCA3-202ENST00000422785 ATP10BO94823 1461 aa19.78■□□□□ 0.76
CDCA3-202ENST00000422785 CFDP1Q9UEE9 299 aaPredicted RBP19.78■□□□□ 0.76
CDCA3-202ENST00000422785 CAMSAP2Q08AD1 1489 aa19.78■□□□□ 0.76
CDCA3-202ENST00000422785 DENND4BO75064 1496 aaPredicted RBP19.77■□□□□ 0.75
CDCA3-202ENST00000422785 PLEKHD1A6NEE1 506 aa19.76■□□□□ 0.75
CDCA3-202ENST00000422785 TRIM52Q96A61 297 aa19.76■□□□□ 0.75
CDCA3-202ENST00000422785 PTPRGP23470 1445 aa19.75■□□□□ 0.75
CDCA3-202ENST00000422785 YTHDC1Q96MU7 727 aaKnown RBP19.73■□□□□ 0.75
CDCA3-202ENST00000422785 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
CDCA3-202ENST00000422785 MPHOSPH9Q99550 1183 aa19.72■□□□□ 0.75
CDCA3-202ENST00000422785 ABCC10Q5T3U5 1492 aa19.72■□□□□ 0.75
CDCA3-202ENST00000422785 ADGBQ8N7X0 1667 aa19.7■□□□□ 0.74
CDCA3-202ENST00000422785 CDC42BPAQ5VT25 1732 aa19.69■□□□□ 0.74
CDCA3-202ENST00000422785 KDM5BQ9UGL1 1544 aa19.69■□□□□ 0.74
CDCA3-202ENST00000422785 CROCC2H7BZ55 1655 aa19.69■□□□□ 0.74
CDCA3-202ENST00000422785 ADGRL2O95490 1459 aa19.68■□□□□ 0.74
CDCA3-202ENST00000422785 NCOA1Q15788 1441 aa19.68■□□□□ 0.74
CDCA3-202ENST00000422785 ZNF777Q9ULD5 760 aaPredicted RBP19.66■□□□□ 0.74
CDCA3-202ENST00000422785 ANKRD30AQ9BXX3 1397 aa19.62■□□□□ 0.73
CDCA3-202ENST00000422785 SHANK2Q9UPX8 1470 aa19.61■□□□□ 0.73
CDCA3-202ENST00000422785 ANKRD30BQ9BXX2 1392 aa19.61■□□□□ 0.73
CDCA3-202ENST00000422785 GTF3C3Q9Y5Q9 886 aa19.61■□□□□ 0.73
CDCA3-202ENST00000422785 DDX10Q13206 875 aaKnown RBP19.58■□□□□ 0.73
CDCA3-202ENST00000422785 SLC4A1APQ9BWU0 796 aaKnown RBP19.58■□□□□ 0.73
CDCA3-202ENST00000422785 FOXD1Q16676 465 aa19.58■□□□□ 0.72
CDCA3-202ENST00000422785 PZPP20742 1482 aa19.57■□□□□ 0.72
CDCA3-202ENST00000422785 RPRD2Q5VT52 1461 aaKnown RBP19.57■□□□□ 0.72
CDCA3-202ENST00000422785 ERCC6L2Q5T890 1561 aa19.57■□□□□ 0.72
CDCA3-202ENST00000422785 HIRIP3Q9BW71 556 aaPredicted RBP19.56■□□□□ 0.72
CDCA3-202ENST00000422785 ABCC2Q92887 1545 aa19.56■□□□□ 0.72
CDCA3-202ENST00000422785 ARHGEF5Q12774 1597 aa19.56■□□□□ 0.72
CDCA3-202ENST00000422785 CLASP1Q7Z460 1538 aa19.56■□□□□ 0.72
CDCA3-202ENST00000422785 C9orf84Q5VXU9 1444 aa19.55■□□□□ 0.72
CDCA3-202ENST00000422785 PREX2Q70Z35 1606 aa19.55■□□□□ 0.72
CDCA3-202ENST00000422785 ANKRD50Q9ULJ7 1429 aa19.54■□□□□ 0.72
CDCA3-202ENST00000422785 L3MBTL2Q969R5 705 aa19.53■□□□□ 0.72
CDCA3-202ENST00000422785 CDC42BPBQ9Y5S2 1711 aa19.53■□□□□ 0.72
CDCA3-202ENST00000422785 MBD5Q9P267 1494 aa19.52■□□□□ 0.72
CDCA3-202ENST00000422785 TSPY4P0CV99 314 aa19.51■□□□□ 0.71
CDCA3-202ENST00000422785 TSPY10P0CW01 314 aa19.51■□□□□ 0.71
CDCA3-202ENST00000422785 SAMD9LQ8IVG5 1584 aa19.5■□□□□ 0.71
CDCA3-202ENST00000422785 TEX14Q8IWB6 1497 aa19.5■□□□□ 0.71
CDCA3-202ENST00000422785 KIAA1107Q9UPP5 1409 aa19.49■□□□□ 0.71
CDCA3-202ENST00000422785 HNRNPMP52272 730 aaKnown RBP eCLIP19.48■□□□□ 0.71
CDCA3-202ENST00000422785 RSPH4AQ5TD94 716 aa19.48■□□□□ 0.71
CDCA3-202ENST00000422785 CCDC141Q6ZP82 1450 aa19.47■□□□□ 0.71
CDCA3-202ENST00000422785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.47■□□□□ 0.71
CDCA3-202ENST00000422785 TTC37Q6PGP7 1564 aa19.47■□□□□ 0.71
CDCA3-202ENST00000422785 UHRF1BP1LA0JNW5 1464 aa19.46■□□□□ 0.71
CDCA3-202ENST00000422785 KDM5DQ9BY66 1539 aa19.45■□□□□ 0.7
CDCA3-202ENST00000422785 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
CDCA3-202ENST00000422785 HSPA5P11021 654 aaKnown RBP19.43■□□□□ 0.7
CDCA3-202ENST00000422785 EIF4G2P78344 907 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDCA3-202ENST00000422785 PKD2Q13563 968 aa19.43■□□□□ 0.7
CDCA3-202ENST00000422785 ARHGAP5Q13017 1502 aa19.43■□□□□ 0.7
CDCA3-202ENST00000422785 MYO5CQ9NQX4 1742 aa19.42■□□□□ 0.7
CDCA3-202ENST00000422785 NUP155O75694 1391 aa19.42■□□□□ 0.7
CDCA3-202ENST00000422785 ZCCHC11Q5TAX3 1644 aaKnown RBP19.41■□□□□ 0.7
CDCA3-202ENST00000422785 ANP32CO43423 234 aa19.4■□□□□ 0.7
CDCA3-202ENST00000422785 MAST1Q9Y2H9 1570 aa19.4■□□□□ 0.7
CDCA3-202ENST00000422785 SYCP2Q9BX26 1530 aa19.4■□□□□ 0.7
CDCA3-202ENST00000422785 KCNH8Q96L42 1107 aa19.4■□□□□ 0.7
CDCA3-202ENST00000422785 NBPF8Q3BBV2 869 aa19.39■□□□□ 0.7
CDCA3-202ENST00000422785 PLEKHH2Q8IVE3 1493 aa19.39■□□□□ 0.7
CDCA3-202ENST00000422785 CCER2I3L3R5 266 aa19.38■□□□□ 0.69
CDCA3-202ENST00000422785 WASHC2AQ641Q2 1341 aa19.36■□□□□ 0.69
CDCA3-202ENST00000422785 PLCH2O75038 1416 aa19.35■□□□□ 0.69
CDCA3-202ENST00000422785 PLXNC1O60486 1568 aa19.32■□□□□ 0.68
CDCA3-202ENST00000422785 SPATA31E1Q6ZUB1 1445 aa19.31■□□□□ 0.68
CDCA3-202ENST00000422785 MYT1Q01538 1121 aa19.31■□□□□ 0.68
CDCA3-202ENST00000422785 FAM135AQ9P2D6 1515 aa19.3■□□□□ 0.68
CDCA3-202ENST00000422785 EFCAB2Q5VUJ9 269 aa19.29■□□□□ 0.68
CDCA3-202ENST00000422785 ARHGEF12Q9NZN5 1544 aa19.29■□□□□ 0.68
CDCA3-202ENST00000422785 UNC13BO14795 1591 aa19.29■□□□□ 0.68
CDCA3-202ENST00000422785 CCDC7Q96M83 1385 aa19.27■□□□□ 0.67
CDCA3-202ENST00000422785 UHRF1BP1Q6BDS2 1440 aa19.26■□□□□ 0.67
CDCA3-202ENST00000422785 ARAP3Q8WWN8 1544 aa19.26■□□□□ 0.67
CDCA3-202ENST00000422785 ABCC1P33527 1531 aa19.26■□□□□ 0.67
CDCA3-202ENST00000422785 DUOX2Q9NRD8 1548 aa19.25■□□□□ 0.67
CDCA3-202ENST00000422785 C11orf95C9JLR9 678 aaPredicted RBP19.25■□□□□ 0.67
CDCA3-202ENST00000422785 CNTLNQ9NXG0 1405 aa19.24■□□□□ 0.67
CDCA3-202ENST00000422785 POLR1AO95602 1720 aaPredicted RBP19.24■□□□□ 0.67
CDCA3-202ENST00000422785 ERBINQ96RT1 1412 aa19.22■□□□□ 0.67
CDCA3-202ENST00000422785 WDR7Q9Y4E6 1490 aa19.22■□□□□ 0.67
CDCA3-202ENST00000422785 IQGAP3Q86VI3 1631 aa19.21■□□□□ 0.67
CDCA3-202ENST00000422785 RALGAPBQ86X10 1494 aa19.2■□□□□ 0.66
CDCA3-202ENST00000422785 MAGI2Q86UL8 1455 aa19.19■□□□□ 0.66
CDCA3-202ENST00000422785 TRAPPC8Q9Y2L5 1435 aa19.19■□□□□ 0.66
CDCA3-202ENST00000422785 ZNF326Q5BKZ1 582 aaKnown RBP19.19■□□□□ 0.66
CDCA3-202ENST00000422785 USP47Q96K76 1375 aa19.18■□□□□ 0.66
CDCA3-202ENST00000422785 KIF7Q2M1P5 1343 aa19.18■□□□□ 0.66
CDCA3-202ENST00000422785 KDM5CP41229 1560 aa19.17■□□□□ 0.66
CDCA3-202ENST00000422785 CCDC144AA2RUR9 1427 aa19.16■□□□□ 0.66
CDCA3-202ENST00000422785 RTEL1-TNFRSF6BF6WH68 1400 aa19.16■□□□□ 0.66
CDCA3-202ENST00000422785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.667e-9■■■□□ 17.5
CDCA3-202ENST00000422785 ABCA9Q8IUA7 1624 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms