RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 PTPRTO14522 1441 aa11.4□□□□□ -0.58
PMS1-208ENST00000421722 SIGLEC1Q9BZZ2 1709 aa11.4□□□□□ -0.58
PMS1-208ENST00000421722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
PMS1-208ENST00000421722 HNRNPUL2Q1KMD3 747 aaKnown RBP11.4□□□□□ -0.58
PMS1-208ENST00000421722 ATP10AO60312 1499 aa11.4□□□□□ -0.58
PMS1-208ENST00000421722 HECW1Q76N89 1606 aa11.4□□□□□ -0.58
PMS1-208ENST00000421722 SPATA31D1Q6ZQQ2 1576 aa11.4□□□□□ -0.59
PMS1-208ENST00000421722 C9orf84Q5VXU9 1444 aa11.39□□□□□ -0.59
PMS1-208ENST00000421722 STRCQ7RTU9 1775 aa11.37□□□□□ -0.59
PMS1-208ENST00000421722 PLCH2O75038 1416 aa11.36□□□□□ -0.59
PMS1-208ENST00000421722 UHRF1BP1Q6BDS2 1440 aa11.35□□□□□ -0.59
PMS1-208ENST00000421722 SCAPERQ9BY12 1400 aa11.35□□□□□ -0.59
PMS1-208ENST00000421722 REREQ9P2R6 1566 aa11.34□□□□□ -0.59
PMS1-208ENST00000421722 SETD1BQ9UPS6 1966 aaKnown RBP11.34□□□□□ -0.59
PMS1-208ENST00000421722 PLPPR3Q6T4P5 718 aa11.33□□□□□ -0.6
PMS1-208ENST00000421722 MLECQ14165 292 aa11.33□□□□□ -0.6
PMS1-208ENST00000421722 CSRNP3Q8WYN3 585 aa11.32□□□□□ -0.6
PMS1-208ENST00000421722 LTBP4Q8N2S1 1624 aa11.31□□□□□ -0.6
PMS1-208ENST00000421722 EFCAB2Q5VUJ9 269 aa11.31□□□□□ -0.6
PMS1-208ENST00000421722 EEA1Q15075 1411 aa11.3□□□□□ -0.6
PMS1-208ENST00000421722 ZNF518AQ6AHZ1 1483 aa11.29□□□□□ -0.6
PMS1-208ENST00000421722 KDM5CP41229 1560 aa11.29□□□□□ -0.6
PMS1-208ENST00000421722 MYO5CQ9NQX4 1742 aa11.29□□□□□ -0.6
PMS1-208ENST00000421722 AGLP35573 1532 aa11.29□□□□□ -0.6
PMS1-208ENST00000421722 CEBPAP49715 358 aaPredicted RBP11.27□□□□□ -0.61
PMS1-208ENST00000421722 TRAPPC8Q9Y2L5 1435 aa11.27□□□□□ -0.61
PMS1-208ENST00000421722 C3P01024 1663 aa11.27□□□□□ -0.61
PMS1-208ENST00000421722 NCOA1Q15788 1441 aa11.26□□□□□ -0.61
PMS1-208ENST00000421722 CNTLNQ9NXG0 1405 aa11.26□□□□□ -0.61
PMS1-208ENST00000421722 DIP2CQ9Y2E4 1556 aa11.26□□□□□ -0.61
PMS1-208ENST00000421722 MLH3Q9UHC1 1453 aa11.25□□□□□ -0.61
PMS1-208ENST00000421722 CDK13Q14004 1512 aaKnown RBP11.25□□□□□ -0.61
PMS1-208ENST00000421722 NPATQ14207 1427 aa11.24□□□□□ -0.61
PMS1-208ENST00000421722 CDK11AQ9UQ88 783 aaPredicted RBP11.24□□□□□ -0.61
PMS1-208ENST00000421722 KIF14Q15058 1648 aa11.23□□□□□ -0.61
PMS1-208ENST00000421722 MROH2AA6NES4 1674 aa11.22□□□□□ -0.61
PMS1-208ENST00000421722 ESF1Q9H501 851 aaKnown RBP11.21□□□□□ -0.61
PMS1-208ENST00000421722 ABCA6Q8N139 1617 aa11.21□□□□□ -0.61
PMS1-208ENST00000421722 ARHGAP5Q13017 1502 aa11.21□□□□□ -0.62
PMS1-208ENST00000421722 TROQ12816 1431 aaPredicted RBP11.21□□□□□ -0.62
PMS1-208ENST00000421722 FMN1Q68DA7 1419 aa11.21□□□□□ -0.62
PMS1-208ENST00000421722 CLIP1P30622 1438 aa11.2□□□□□ -0.62
PMS1-208ENST00000421722 PLA2R1Q13018 1463 aa11.19□□□□□ -0.62
PMS1-208ENST00000421722 CAMSAP1Q5T5Y3 1602 aa11.18□□□□□ -0.62
PMS1-208ENST00000421722 PKD2Q13563 968 aa11.18□□□□□ -0.62
PMS1-208ENST00000421722 AFAP1Q8N556 730 aa11.18□□□□□ -0.62
PMS1-208ENST00000421722 ITSN2Q9NZM3 1697 aa11.17□□□□□ -0.62
PMS1-208ENST00000421722 ABCC1P33527 1531 aa11.17□□□□□ -0.62
PMS1-208ENST00000421722 ZNF142P52746 1687 aaPredicted RBP11.17□□□□□ -0.62
PMS1-208ENST00000421722 MYT1LQ9UL68 1186 aa11.16□□□□□ -0.62
PMS1-208ENST00000421722 PREX2Q70Z35 1606 aa11.16□□□□□ -0.62
PMS1-208ENST00000421722 CDC42BPBQ9Y5S2 1711 aa11.16□□□□□ -0.62
PMS1-208ENST00000421722 UBAP1LF5GYI3 381 aa11.15□□□□□ -0.62
PMS1-208ENST00000421722 RANGAP1P46060 587 aaPredicted RBP11.15□□□□□ -0.62
PMS1-208ENST00000421722 KIDINS220Q9ULH0 1771 aa11.14□□□□□ -0.63
PMS1-208ENST00000421722 TCOF1Q13428 1488 aaKnown RBP11.14□□□□□ -0.63
PMS1-208ENST00000421722 ZMYM3Q14202 1370 aa11.13□□□□□ -0.63
PMS1-208ENST00000421722 NCKAP5LQ9HCH0 1330 aa11.12□□□□□ -0.63
PMS1-208ENST00000421722 PPP6R1Q9UPN7 881 aa11.12□□□□□ -0.63
PMS1-208ENST00000421722 MED1Q15648 1581 aaPredicted RBP11.12□□□□□ -0.63
PMS1-208ENST00000421722 MYO3AQ8NEV4 1616 aa11.11□□□□□ -0.63
PMS1-208ENST00000421722 ZNF335Q9H4Z2 1342 aaPredicted RBP11.11□□□□□ -0.63
PMS1-208ENST00000421722 CEP170BQ9Y4F5 1589 aaPredicted RBP11.11□□□□□ -0.63
PMS1-208ENST00000421722 CPS1P31327 1500 aa11.11□□□□□ -0.63
PMS1-208ENST00000421722 ARHGAP35Q9NRY4 1499 aa11.1□□□□□ -0.63
PMS1-208ENST00000421722 PTPRKQ15262 1439 aa11.1□□□□□ -0.63
PMS1-208ENST00000421722 SAMD9LQ8IVG5 1584 aa11.1□□□□□ -0.63
PMS1-208ENST00000421722 CCDC18Q5T9S5 1454 aa11.1□□□□□ -0.63
PMS1-208ENST00000421722 ATP1B4Q9UN42 357 aaPredicted RBP11.09□□□□□ -0.63
PMS1-208ENST00000421722 SUPT6HQ7KZ85 1726 aaKnown RBP11.09□□□□□ -0.63
PMS1-208ENST00000421722 CLTCQ00610 1675 aaKnown RBP11.07□□□□□ -0.64
PMS1-208ENST00000421722 PLXNC1O60486 1568 aa11.07□□□□□ -0.64
PMS1-208ENST00000421722 A2ML1A8K2U0 1454 aa11.07□□□□□ -0.64
PMS1-208ENST00000421722 LRRIQ1Q96JM4 1722 aa11.07□□□□□ -0.64
PMS1-208ENST00000421722 CDC42BPAQ5VT25 1732 aa11.07□□□□□ -0.64
PMS1-208ENST00000421722 PLEKHH2Q8IVE3 1493 aa11.06□□□□□ -0.64
PMS1-208ENST00000421722 TOM1O60784 492 aa11.06□□□□□ -0.64
PMS1-208ENST00000421722 KIAA1107Q9UPP5 1409 aa11.06□□□□□ -0.64
PMS1-208ENST00000421722 CASKIN1Q8WXD9 1431 aa11.05□□□□□ -0.64
PMS1-208ENST00000421722 SPAG9O60271 1321 aaKnown RBP11.05□□□□□ -0.64
PMS1-208ENST00000421722 INO80Q9ULG1 1556 aaPredicted RBP11.05□□□□□ -0.64
PMS1-208ENST00000421722 HSPA1LP34931 641 aa11.05□□□□□ -0.64
PMS1-208ENST00000421722 A2MP01023 1474 aa11.05□□□□□ -0.64
PMS1-208ENST00000421722 ATP7AQ04656 1500 aa11.04□□□□□ -0.64
PMS1-208ENST00000421722 FAM135AQ9P2D6 1515 aa11.04□□□□□ -0.64
PMS1-208ENST00000421722 SHANK2Q9UPX8 1470 aa11.04□□□□□ -0.64
PMS1-208ENST00000421722 DNMT1P26358 1616 aaKnown RBP11.03□□□□□ -0.64
PMS1-208ENST00000421722 POLR1AO95602 1720 aaPredicted RBP11.03□□□□□ -0.64
PMS1-208ENST00000421722 ADGBQ8N7X0 1667 aa11.02□□□□□ -0.64
PMS1-208ENST00000421722 SYCP2Q9BX26 1530 aa11.02□□□□□ -0.65
PMS1-208ENST00000421722 UBTFP17480 764 aaKnown RBP11.01□□□□□ -0.65
PMS1-208ENST00000421722 GPATCH8Q9UKJ3 1502 aaKnown RBP11.01□□□□□ -0.65
PMS1-208ENST00000421722 NEURL4Q96JN8 1562 aa11.01□□□□□ -0.65
PMS1-208ENST00000421722 PHF23Q9BUL5 403 aaPredicted RBP11□□□□□ -0.65
PMS1-208ENST00000421722 VWDEQ8N2E2 1590 aa10.99□□□□□ -0.65
PMS1-208ENST00000421722 DEPDC5O75140 1603 aa10.99□□□□□ -0.65
PMS1-208ENST00000421722 MED14O60244 1454 aa10.99□□□□□ -0.65
PMS1-208ENST00000421722 FYCO1Q9BQS8 1478 aa10.98□□□□□ -0.65
PMS1-208ENST00000421722 TNRQ92752 1358 aa10.98□□□□□ -0.65
PMS1-208ENST00000421722 PIP4K2BP78356 416 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms