RNA–Protein interactions for RNA: ENST00000421538.1

LINC00899-201, long intergenic non-protein coding RNA 899, humanhuman

TSL 1 (best)

Gene LINC00899, Length 2,584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00899-201ENST00000421538 TCOF1Q13428 1488 aaKnown RBP19.65■□□□□ 0.74
LINC00899-201ENST00000421538 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
LINC00899-201ENST00000421538 KIF14Q15058 1648 aa19.62■□□□□ 0.73
LINC00899-201ENST00000421538 DDX10Q13206 875 aaKnown RBP19.6■□□□□ 0.73
LINC00899-201ENST00000421538 UACAQ9BZF9 1416 aa19.59■□□□□ 0.73
LINC00899-201ENST00000421538 ZNF644Q9H582 1327 aaPredicted RBP19.59■□□□□ 0.73
LINC00899-201ENST00000421538 PLEKHD1A6NEE1 506 aa19.58■□□□□ 0.73
LINC00899-201ENST00000421538 ADCY10Q96PN6 1610 aa19.58■□□□□ 0.72
LINC00899-201ENST00000421538 HFM1A2PYH4 1435 aa19.56■□□□□ 0.72
LINC00899-201ENST00000421538 CHIC2Q9UKJ5 165 aa19.56■□□□□ 0.72
LINC00899-201ENST00000421538 HIRIP3Q9BW71 556 aaPredicted RBP19.55■□□□□ 0.72
LINC00899-201ENST00000421538 GPATCH8Q9UKJ3 1502 aaKnown RBP19.55■□□□□ 0.72
LINC00899-201ENST00000421538 NAIPQ13075 1403 aa19.55■□□□□ 0.72
LINC00899-201ENST00000421538 RRP7BPQ9NSQ0 103 aa19.52■□□□□ 0.72
LINC00899-201ENST00000421538 MSH5O43196 834 aa19.51■□□□□ 0.71
LINC00899-201ENST00000421538 CFDP1Q9UEE9 299 aaPredicted RBP19.51■□□□□ 0.71
LINC00899-201ENST00000421538 ABCC10Q5T3U5 1492 aa19.51■□□□□ 0.71
LINC00899-201ENST00000421538 ABCC2Q92887 1545 aa19.51■□□□□ 0.71
LINC00899-201ENST00000421538 PPP1R15AO75807 674 aaPredicted RBP19.5■□□□□ 0.71
LINC00899-201ENST00000421538 ITSN2Q9NZM3 1697 aa19.49■□□□□ 0.71
LINC00899-201ENST00000421538 DAPK1P53355 1430 aa19.48■□□□□ 0.71
LINC00899-201ENST00000421538 ERICH6Q7L0X2 663 aa19.48■□□□□ 0.71
LINC00899-201ENST00000421538 TRIM52Q96A61 297 aa19.48■□□□□ 0.71
LINC00899-201ENST00000421538 ABCC5O15440 1437 aa19.48■□□□□ 0.71
LINC00899-201ENST00000421538 CAMSAP2Q08AD1 1489 aa19.47■□□□□ 0.71
LINC00899-201ENST00000421538 ZNF777Q9ULD5 760 aaPredicted RBP19.47■□□□□ 0.71
LINC00899-201ENST00000421538 CDC42BPAQ5VT25 1732 aa19.47■□□□□ 0.71
LINC00899-201ENST00000421538 CCER2I3L3R5 266 aa19.47■□□□□ 0.71
LINC00899-201ENST00000421538 DNMT1P26358 1616 aaKnown RBP19.47■□□□□ 0.71
LINC00899-201ENST00000421538 FANCIQ9NVI1 1328 aa19.45■□□□□ 0.7
LINC00899-201ENST00000421538 TIMELESSQ9UNS1 1208 aa19.45■□□□□ 0.7
LINC00899-201ENST00000421538 KDM6BO15054 1643 aa19.44■□□□□ 0.7
LINC00899-201ENST00000421538 ANP32CO43423 234 aa19.43■□□□□ 0.7
LINC00899-201ENST00000421538 GCC2Q8IWJ2 1684 aa19.43■□□□□ 0.7
LINC00899-201ENST00000421538 AKNAQ7Z591 1439 aa19.43■□□□□ 0.7
LINC00899-201ENST00000421538 OSCARQ8IYS5 282 aa19.42■□□□□ 0.7
LINC00899-201ENST00000421538 UHRF1BP1LA0JNW5 1464 aa19.41■□□□□ 0.7
LINC00899-201ENST00000421538 ZCCHC11Q5TAX3 1644 aaKnown RBP19.39■□□□□ 0.7
LINC00899-201ENST00000421538 ROCK1Q13464 1354 aa19.38■□□□□ 0.69
LINC00899-201ENST00000421538 KDM5BQ9UGL1 1544 aa19.38■□□□□ 0.69
LINC00899-201ENST00000421538 TTC37Q6PGP7 1564 aa19.36■□□□□ 0.69
LINC00899-201ENST00000421538 MYT1LQ9UL68 1186 aa19.36■□□□□ 0.69
LINC00899-201ENST00000421538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.36■□□□□ 0.69
LINC00899-201ENST00000421538 TONSLQ96HA7 1378 aa19.36■□□□□ 0.69
LINC00899-201ENST00000421538 CDC42BPBQ9Y5S2 1711 aa19.35■□□□□ 0.69
LINC00899-201ENST00000421538 DAXXQ9UER7 740 aaPredicted RBP19.35■□□□□ 0.69
LINC00899-201ENST00000421538 PREX2Q70Z35 1606 aa19.33■□□□□ 0.69
LINC00899-201ENST00000421538 CROCC2H7BZ55 1655 aa19.33■□□□□ 0.68
LINC00899-201ENST00000421538 NCOA1Q15788 1441 aa19.32■□□□□ 0.68
LINC00899-201ENST00000421538 HNRNPMP52272 730 aaKnown RBP eCLIP19.31■□□□□ 0.68
LINC00899-201ENST00000421538 DENND4BO75064 1496 aaPredicted RBP19.31■□□□□ 0.68
LINC00899-201ENST00000421538 SAMD9LQ8IVG5 1584 aa19.3■□□□□ 0.68
LINC00899-201ENST00000421538 ADGBQ8N7X0 1667 aa19.29■□□□□ 0.68
LINC00899-201ENST00000421538 ADGRL2O95490 1459 aa19.28■□□□□ 0.68
LINC00899-201ENST00000421538 MBD5Q9P267 1494 aa19.28■□□□□ 0.68
LINC00899-201ENST00000421538 ARHGAP5Q13017 1502 aa19.26■□□□□ 0.67
LINC00899-201ENST00000421538 MYO5CQ9NQX4 1742 aa19.25■□□□□ 0.67
LINC00899-201ENST00000421538 C9orf84Q5VXU9 1444 aa19.25■□□□□ 0.67
LINC00899-201ENST00000421538 ANKRD30AQ9BXX3 1397 aa19.24■□□□□ 0.67
LINC00899-201ENST00000421538 MPHOSPH9Q99550 1183 aa19.24■□□□□ 0.67
LINC00899-201ENST00000421538 ARHGEF5Q12774 1597 aa19.24■□□□□ 0.67
LINC00899-201ENST00000421538 SHANK2Q9UPX8 1470 aa19.23■□□□□ 0.67
LINC00899-201ENST00000421538 IRX6P78412 446 aaPredicted RBP19.23■□□□□ 0.67
LINC00899-201ENST00000421538 SYCP2Q9BX26 1530 aa19.22■□□□□ 0.67
LINC00899-201ENST00000421538 TSPY4P0CV99 314 aa19.22■□□□□ 0.67
LINC00899-201ENST00000421538 TSPY10P0CW01 314 aa19.22■□□□□ 0.67
LINC00899-201ENST00000421538 DEKP35659 375 aaKnown RBP19.21■□□□□ 0.67
LINC00899-201ENST00000421538 HNRNPUQ00839 825 aaKnown RBP eCLIP19.21■□□□□ 0.67
LINC00899-201ENST00000421538 FOXD1Q16676 465 aa19.21■□□□□ 0.67
LINC00899-201ENST00000421538 PLCH2O75038 1416 aa19.21■□□□□ 0.66
LINC00899-201ENST00000421538 CCDC141Q6ZP82 1450 aa19.2■□□□□ 0.66
LINC00899-201ENST00000421538 WDR7Q9Y4E6 1490 aa19.2■□□□□ 0.66
LINC00899-201ENST00000421538 ERICH6BQ5W0A0 696 aa19.19■□□□□ 0.66
LINC00899-201ENST00000421538 ANKRD50Q9ULJ7 1429 aa19.18■□□□□ 0.66
LINC00899-201ENST00000421538 ARHGEF12Q9NZN5 1544 aa19.17■□□□□ 0.66
LINC00899-201ENST00000421538 PRKCSHP14314 528 aaPredicted RBP19.17■□□□□ 0.66
LINC00899-201ENST00000421538 ASXL2Q76L83 1435 aa19.16■□□□□ 0.66
LINC00899-201ENST00000421538 PZPP20742 1482 aa19.15■□□□□ 0.66
LINC00899-201ENST00000421538 PPP4R2Q9NY27 417 aa19.15■□□□□ 0.66
LINC00899-201ENST00000421538 KIF15Q9NS87 1388 aa19.15■□□□□ 0.66
LINC00899-201ENST00000421538 RSPH4AQ5TD94 716 aa19.15■□□□□ 0.66
LINC00899-201ENST00000421538 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
LINC00899-201ENST00000421538 KIAA1107Q9UPP5 1409 aa19.14■□□□□ 0.66
LINC00899-201ENST00000421538 EFCAB2Q5VUJ9 269 aa19.14■□□□□ 0.65
LINC00899-201ENST00000421538 WASHC2AQ641Q2 1341 aa19.12■□□□□ 0.65
LINC00899-201ENST00000421538 PLEKHH2Q8IVE3 1493 aa19.12■□□□□ 0.65
LINC00899-201ENST00000421538 HSPA5P11021 654 aaKnown RBP19.12■□□□□ 0.65
LINC00899-201ENST00000421538 ANKRD30BQ9BXX2 1392 aa19.1■□□□□ 0.65
LINC00899-201ENST00000421538 ABCC1P33527 1531 aa19.1■□□□□ 0.65
LINC00899-201ENST00000421538 MAST1Q9Y2H9 1570 aa19.09■□□□□ 0.65
LINC00899-201ENST00000421538 ABCA9Q8IUA7 1624 aa19.09■□□□□ 0.65
LINC00899-201ENST00000421538 TRAPPC8Q9Y2L5 1435 aa19.09■□□□□ 0.65
LINC00899-201ENST00000421538 NPM1P06748 294 aaKnown RBP eCLIP19.08■□□□□ 0.65
LINC00899-201ENST00000421538 ARAP3Q8WWN8 1544 aa19.07■□□□□ 0.64
LINC00899-201ENST00000421538 NUP155O75694 1391 aa19.06■□□□□ 0.64
LINC00899-201ENST00000421538 NOP58Q9Y2X3 529 aaKnown RBP19.05■□□□□ 0.64
LINC00899-201ENST00000421538 PKD2Q13563 968 aa19.04■□□□□ 0.64
LINC00899-201ENST00000421538 FANCAO15360 1455 aa19.04■□□□□ 0.64
LINC00899-201ENST00000421538 AFAP1Q8N556 730 aa19.03■□□□□ 0.64
LINC00899-201ENST00000421538 CCDC184Q52MB2 194 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms