RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 ZNF335Q9H4Z2 1342 aaPredicted RBP10.04□□□□□ -0.8
HDAC8-212ENST00000421523 EFCAB5A4FU69 1503 aa10.03□□□□□ -0.8
HDAC8-212ENST00000421523 ZMYM4Q5VZL5 1548 aa10.02□□□□□ -0.81
HDAC8-212ENST00000421523 NCOA1Q15788 1441 aa10.01□□□□□ -0.81
HDAC8-212ENST00000421523 FHOD3Q2V2M9 1422 aa10.01□□□□□ -0.81
HDAC8-212ENST00000421523 ATP10BO94823 1461 aa10□□□□□ -0.81
HDAC8-212ENST00000421523 HECW1Q76N89 1606 aa9.98□□□□□ -0.81
HDAC8-212ENST00000421523 GOLGA3Q08378 1498 aa9.98□□□□□ -0.81
HDAC8-212ENST00000421523 SETD1BQ9UPS6 1966 aaKnown RBP9.97□□□□□ -0.81
HDAC8-212ENST00000421523 CFAP74Q9C0B2 1584 aa9.97□□□□□ -0.81
HDAC8-212ENST00000421523 CAMSAP1Q5T5Y3 1602 aa9.96□□□□□ -0.81
HDAC8-212ENST00000421523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.96□□□□□ -0.82
HDAC8-212ENST00000421523 HNRNPUL2Q1KMD3 747 aaKnown RBP9.96□□□□□ -0.82
HDAC8-212ENST00000421523 MAGI2Q86UL8 1455 aa9.96□□□□□ -0.82
HDAC8-212ENST00000421523 RAPGEF2Q9Y4G8 1499 aa9.96□□□□□ -0.82
HDAC8-212ENST00000421523 C3P01024 1663 aa9.96□□□□□ -0.82
HDAC8-212ENST00000421523 NCKAP5LQ9HCH0 1330 aa9.95□□□□□ -0.82
HDAC8-212ENST00000421523 C9orf84Q5VXU9 1444 aa9.95□□□□□ -0.82
HDAC8-212ENST00000421523 CTTNBP2Q8WZ74 1663 aa9.95□□□□□ -0.82
HDAC8-212ENST00000421523 ATP10AO60312 1499 aa9.93□□□□□ -0.82
HDAC8-212ENST00000421523 RGS17Q9UGC6 210 aaPredicted RBP9.92□□□□□ -0.82
HDAC8-212ENST00000421523 SETD1AO15047 1707 aaKnown RBP9.92□□□□□ -0.82
HDAC8-212ENST00000421523 TOM1O60784 492 aa9.91□□□□□ -0.82
HDAC8-212ENST00000421523 P3H3Q8IVL6 736 aa9.91□□□□□ -0.82
HDAC8-212ENST00000421523 TRAPPC8Q9Y2L5 1435 aa9.9□□□□□ -0.82
HDAC8-212ENST00000421523 FAM9AQ8IZU1 332 aaPredicted RBP9.88□□□□□ -0.83
HDAC8-212ENST00000421523 ESF1Q9H501 851 aaKnown RBP9.88□□□□□ -0.83
HDAC8-212ENST00000421523 SCAPERQ9BY12 1400 aa9.88□□□□□ -0.83
HDAC8-212ENST00000421523 RAPGEF6Q8TEU7 1601 aa9.87□□□□□ -0.83
HDAC8-212ENST00000421523 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.87□□□□□ -0.83
HDAC8-212ENST00000421523 PPP6R1Q9UPN7 881 aa9.86□□□□□ -0.83
HDAC8-212ENST00000421523 SUPT6HQ7KZ85 1726 aaKnown RBP9.85□□□□□ -0.83
HDAC8-212ENST00000421523 POTEAQ6S8J7 498 aa9.85□□□□□ -0.83
HDAC8-212ENST00000421523 MYT1LQ9UL68 1186 aa9.84□□□□□ -0.83
HDAC8-212ENST00000421523 ALKQ9UM73 1620 aa9.84□□□□□ -0.83
HDAC8-212ENST00000421523 NUP153P49790 1475 aaKnown RBP9.84□□□□□ -0.83
HDAC8-212ENST00000421523 CPS1P31327 1500 aa9.83□□□□□ -0.84
HDAC8-212ENST00000421523 PKD2Q13563 968 aa9.83□□□□□ -0.84
HDAC8-212ENST00000421523 TCOF1Q13428 1488 aaKnown RBP9.83□□□□□ -0.84
HDAC8-212ENST00000421523 MYO3AQ8NEV4 1616 aa9.82□□□□□ -0.84
HDAC8-212ENST00000421523 POTEDQ86YR6 584 aa9.82□□□□□ -0.84
HDAC8-212ENST00000421523 PLA2R1Q13018 1463 aa9.82□□□□□ -0.84
HDAC8-212ENST00000421523 DIP2CQ9Y2E4 1556 aa9.82□□□□□ -0.84
HDAC8-212ENST00000421523 PTPRKQ15262 1439 aa9.82□□□□□ -0.84
HDAC8-212ENST00000421523 PLEKHD1A6NEE1 506 aa9.81□□□□□ -0.84
HDAC8-212ENST00000421523 ZNF142P52746 1687 aaPredicted RBP9.8□□□□□ -0.84
HDAC8-212ENST00000421523 CEP170BQ9Y4F5 1589 aaPredicted RBP9.8□□□□□ -0.84
HDAC8-212ENST00000421523 ABCA6Q8N139 1617 aa9.8□□□□□ -0.84
HDAC8-212ENST00000421523 NPATQ14207 1427 aa9.8□□□□□ -0.84
HDAC8-212ENST00000421523 SHANK2Q9UPX8 1470 aa9.79□□□□□ -0.84
HDAC8-212ENST00000421523 CNTLNQ9NXG0 1405 aa9.79□□□□□ -0.84
HDAC8-212ENST00000421523 ZNF518AQ6AHZ1 1483 aa9.79□□□□□ -0.84
HDAC8-212ENST00000421523 AGLP35573 1532 aa9.77□□□□□ -0.84
HDAC8-212ENST00000421523 REREQ9P2R6 1566 aa9.77□□□□□ -0.85
HDAC8-212ENST00000421523 AFAP1Q8N556 730 aa9.77□□□□□ -0.85
HDAC8-212ENST00000421523 KDM5CP41229 1560 aa9.76□□□□□ -0.85
HDAC8-212ENST00000421523 PLCH2O75038 1416 aa9.76□□□□□ -0.85
HDAC8-212ENST00000421523 MROH2AA6NES4 1674 aa9.75□□□□□ -0.85
HDAC8-212ENST00000421523 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
HDAC8-212ENST00000421523 SAMD9Q5K651 1589 aa9.75□□□□□ -0.85
HDAC8-212ENST00000421523 POLR1AO95602 1720 aaPredicted RBP9.74□□□□□ -0.85
HDAC8-212ENST00000421523 MYO5CQ9NQX4 1742 aa9.74□□□□□ -0.85
HDAC8-212ENST00000421523 NEURL4Q96JN8 1562 aa9.74□□□□□ -0.85
HDAC8-212ENST00000421523 RNF17Q9BXT8 1623 aaKnown RBP9.74□□□□□ -0.85
HDAC8-212ENST00000421523 ZMYM3Q14202 1370 aa9.74□□□□□ -0.85
HDAC8-212ENST00000421523 VWDEQ8N2E2 1590 aa9.73□□□□□ -0.85
HDAC8-212ENST00000421523 EFCAB2Q5VUJ9 269 aa9.73□□□□□ -0.85
HDAC8-212ENST00000421523 CLTCQ00610 1675 aaKnown RBP9.72□□□□□ -0.85
HDAC8-212ENST00000421523 RANGAP1P46060 587 aaPredicted RBP9.72□□□□□ -0.85
HDAC8-212ENST00000421523 ARHGAP5Q13017 1502 aa9.71□□□□□ -0.86
HDAC8-212ENST00000421523 CDK13Q14004 1512 aaKnown RBP9.71□□□□□ -0.86
HDAC8-212ENST00000421523 TRIM52Q96A61 297 aa9.7□□□□□ -0.86
HDAC8-212ENST00000421523 DNMT1P26358 1616 aaKnown RBP9.7□□□□□ -0.86
HDAC8-212ENST00000421523 MLH3Q9UHC1 1453 aa9.69□□□□□ -0.86
HDAC8-212ENST00000421523 LRRC7Q96NW7 1537 aa9.68□□□□□ -0.86
HDAC8-212ENST00000421523 A2ML1A8K2U0 1454 aa9.68□□□□□ -0.86
HDAC8-212ENST00000421523 STRCP1A6NGW2 1772 aa9.68□□□□□ -0.86
HDAC8-212ENST00000421523 KIF14Q15058 1648 aa9.67□□□□□ -0.86
HDAC8-212ENST00000421523 PRXQ9BXM0 1461 aa9.66□□□□□ -0.86
HDAC8-212ENST00000421523 SYNMO15061 1565 aa9.66□□□□□ -0.86
HDAC8-212ENST00000421523 KIDINS220Q9ULH0 1771 aa9.65□□□□□ -0.86
HDAC8-212ENST00000421523 ITSN2Q9NZM3 1697 aa9.64□□□□□ -0.87
HDAC8-212ENST00000421523 NPHP4O75161 1426 aaPredicted RBP9.64□□□□□ -0.87
HDAC8-212ENST00000421523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.63□□□□□ -0.87
HDAC8-212ENST00000421523 IQGAP1P46940 1657 aa9.63□□□□□ -0.87
HDAC8-212ENST00000421523 ABCC1P33527 1531 aa9.62□□□□□ -0.87
HDAC8-212ENST00000421523 MSH5O43196 834 aa9.62□□□□□ -0.87
HDAC8-212ENST00000421523 ANKLE2Q86XL3 938 aa9.62□□□□□ -0.87
HDAC8-212ENST00000421523 GGT6Q6P531 493 aa9.6□□□□□ -0.87
HDAC8-212ENST00000421523 ATP1B4Q9UN42 357 aaPredicted RBP9.6□□□□□ -0.87
HDAC8-212ENST00000421523 CDC42BPBQ9Y5S2 1711 aa9.59□□□□□ -0.87
HDAC8-212ENST00000421523 ROBO1Q9Y6N7 1651 aa9.59□□□□□ -0.87
HDAC8-212ENST00000421523 TNRQ92752 1358 aa9.59□□□□□ -0.87
HDAC8-212ENST00000421523 DEPDC5O75140 1603 aa9.58□□□□□ -0.88
HDAC8-212ENST00000421523 MEX3CQ5U5Q3 659 aaKnown RBP9.58□□□□□ -0.88
HDAC8-212ENST00000421523 MED14O60244 1454 aa9.58□□□□□ -0.88
HDAC8-212ENST00000421523 SETBP1Q9Y6X0 1596 aa9.58□□□□□ -0.88
HDAC8-212ENST00000421523 FAM135BQ49AJ0 1406 aa9.57□□□□□ -0.88
HDAC8-212ENST00000421523 XIRP1Q702N8 1843 aaKnown RBP9.57□□□□□ -0.88
HDAC8-212ENST00000421523 FBXO31Q5XUX0 539 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms