RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 PPP1R15AO75807 674 aaPredicted RBP20.06■□□□□ 0.8
CHRD-204ENST00000420973 PBRM1Q86U86 1689 aa20.05■□□□□ 0.8
CHRD-204ENST00000420973 ADAMTS12P58397 1594 aa20.05■□□□□ 0.8
CHRD-204ENST00000420973 KDM2AQ9Y2K7 1162 aa20.05■□□□□ 0.8
CHRD-204ENST00000420973 CARMIL2Q6F5E8 1435 aa20.05■□□□□ 0.8
CHRD-204ENST00000420973 KIAA0586Q9BVV6 1533 aa20.04■□□□□ 0.8
CHRD-204ENST00000420973 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
CHRD-204ENST00000420973 THOC2Q8NI27 1593 aaKnown RBP20.03■□□□□ 0.8
CHRD-204ENST00000420973 MAGI3Q5TCQ9 1506 aa20.03■□□□□ 0.8
CHRD-204ENST00000420973 TSPY4P0CV99 314 aa20.03■□□□□ 0.8
CHRD-204ENST00000420973 TSPY10P0CW01 314 aa20.03■□□□□ 0.8
CHRD-204ENST00000420973 MAP3K1Q13233 1512 aa20.03■□□□□ 0.8
CHRD-204ENST00000420973 SENP3-EIF4A1A0A087X0R7 540 aa20.02■□□□□ 0.8
CHRD-204ENST00000420973 DAXXQ9UER7 740 aaPredicted RBP20.02■□□□□ 0.8
CHRD-204ENST00000420973 MAPKBP1O60336 1514 aa19.99■□□□□ 0.79
CHRD-204ENST00000420973 RTL5Q5HYW3 569 aaPredicted RBP19.99■□□□□ 0.79
CHRD-204ENST00000420973 WDR62O43379 1518 aa19.99■□□□□ 0.79
CHRD-204ENST00000420973 CFAP43Q8NDM7 1665 aa19.98■□□□□ 0.79
CHRD-204ENST00000420973 NAIPQ13075 1403 aa19.97■□□□□ 0.79
CHRD-204ENST00000420973 L3MBTL2Q969R5 705 aa19.97■□□□□ 0.79
CHRD-204ENST00000420973 PTPRGP23470 1445 aa19.96■□□□□ 0.79
CHRD-204ENST00000420973 ANP32CO43423 234 aa19.96■□□□□ 0.79
CHRD-204ENST00000420973 SYNJ2O15056 1496 aa19.96■□□□□ 0.79
CHRD-204ENST00000420973 RGL3Q3MIN7 710 aa19.95■□□□□ 0.78
CHRD-204ENST00000420973 SAMD9Q5K651 1589 aa19.95■□□□□ 0.78
CHRD-204ENST00000420973 EHBP1L1Q8N3D4 1523 aa19.95■□□□□ 0.78
CHRD-204ENST00000420973 DISP1Q96F81 1524 aa19.94■□□□□ 0.78
CHRD-204ENST00000420973 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
CHRD-204ENST00000420973 PKD2Q13563 968 aa19.93■□□□□ 0.78
CHRD-204ENST00000420973 HECW1Q76N89 1606 aa19.92■□□□□ 0.78
CHRD-204ENST00000420973 NUP153P49790 1475 aaKnown RBP19.92■□□□□ 0.78
CHRD-204ENST00000420973 HFM1A2PYH4 1435 aa19.9■□□□□ 0.78
CHRD-204ENST00000420973 PTPN23Q9H3S7 1636 aa19.9■□□□□ 0.78
CHRD-204ENST00000420973 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.78
CHRD-204ENST00000420973 UACAQ9BZF9 1416 aa19.88■□□□□ 0.77
CHRD-204ENST00000420973 HSPA5P11021 654 aaKnown RBP19.88■□□□□ 0.77
CHRD-204ENST00000420973 MAGI1Q96QZ7 1491 aaPredicted RBP19.87■□□□□ 0.77
CHRD-204ENST00000420973 LRRIQ1Q96JM4 1722 aa19.86■□□□□ 0.77
CHRD-204ENST00000420973 CEP170Q5SW79 1584 aa19.85■□□□□ 0.77
CHRD-204ENST00000420973 UGGT2Q9NYU1 1516 aa19.84■□□□□ 0.77
CHRD-204ENST00000420973 EIF4G2P78344 907 aaKnown RBP eCLIP19.84■□□□□ 0.77
CHRD-204ENST00000420973 FANCIQ9NVI1 1328 aa19.84■□□□□ 0.77
CHRD-204ENST00000420973 KIAA0556O60303 1618 aa19.84■□□□□ 0.77
CHRD-204ENST00000420973 TIMELESSQ9UNS1 1208 aa19.83■□□□□ 0.77
CHRD-204ENST00000420973 NUP155O75694 1391 aa19.82■□□□□ 0.76
CHRD-204ENST00000420973 TROQ12816 1431 aaPredicted RBP19.82■□□□□ 0.76
CHRD-204ENST00000420973 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
CHRD-204ENST00000420973 DAPK1P53355 1430 aa19.8■□□□□ 0.76
CHRD-204ENST00000420973 ABCC5O15440 1437 aa19.79■□□□□ 0.76
CHRD-204ENST00000420973 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.78■□□□□ 0.76
CHRD-204ENST00000420973 NBPF8Q3BBV2 869 aa19.77■□□□□ 0.75
CHRD-204ENST00000420973 FAM9BQ8IZU0 186 aa19.77■□□□□ 0.75
CHRD-204ENST00000420973 GLIPR1L2Q4G1C9 344 aa19.76■□□□□ 0.75
CHRD-204ENST00000420973 DCAF11Q8TEB1 546 aa19.76■□□□□ 0.75
CHRD-204ENST00000420973 RAPGEF6Q8TEU7 1601 aa19.75■□□□□ 0.75
CHRD-204ENST00000420973 ANKRD30AQ9BXX3 1397 aa19.74■□□□□ 0.75
CHRD-204ENST00000420973 KDM6BO15054 1643 aa19.73■□□□□ 0.75
CHRD-204ENST00000420973 MIA2Q96PC5 1412 aa19.73■□□□□ 0.75
CHRD-204ENST00000420973 VSIG10Q8N0Z9 540 aa19.73■□□□□ 0.75
CHRD-204ENST00000420973 HNRNPUQ00839 825 aaKnown RBP eCLIP19.72■□□□□ 0.75
CHRD-204ENST00000420973 ATP10BO94823 1461 aa19.72■□□□□ 0.75
CHRD-204ENST00000420973 GPATCH8Q9UKJ3 1502 aaKnown RBP19.7■□□□□ 0.74
CHRD-204ENST00000420973 CAMSAP2Q08AD1 1489 aa19.7■□□□□ 0.74
CHRD-204ENST00000420973 NOP58Q9Y2X3 529 aaKnown RBP19.7■□□□□ 0.74
CHRD-204ENST00000420973 NUP160Q12769 1436 aa19.69■□□□□ 0.74
CHRD-204ENST00000420973 KIF14Q15058 1648 aa19.69■□□□□ 0.74
CHRD-204ENST00000420973 AFAP1Q8N556 730 aa19.68■□□□□ 0.74
CHRD-204ENST00000420973 A0A0U1RQG5 324 aaPredicted RBP19.68■□□□□ 0.74
CHRD-204ENST00000420973 IRX6P78412 446 aaPredicted RBP19.68■□□□□ 0.74
CHRD-204ENST00000420973 C11orf95C9JLR9 678 aaPredicted RBP19.67■□□□□ 0.74
CHRD-204ENST00000420973 ANKRD50Q9ULJ7 1429 aa19.66■□□□□ 0.74
CHRD-204ENST00000420973 NPM1P06748 294 aaKnown RBP eCLIP19.66■□□□□ 0.74
CHRD-204ENST00000420973 CARD11Q9BXL7 1154 aa19.66■□□□□ 0.74
CHRD-204ENST00000420973 KIF15Q9NS87 1388 aa19.66■□□□□ 0.74
CHRD-204ENST00000420973 CHGAP10645 457 aaKnown RBP19.66■□□□□ 0.74
CHRD-204ENST00000420973 WASHC2AQ641Q2 1341 aa19.65■□□□□ 0.74
CHRD-204ENST00000420973 NCOA1Q15788 1441 aa19.62■□□□□ 0.73
CHRD-204ENST00000420973 ZMYND15Q9H091 742 aa19.61■□□□□ 0.73
CHRD-204ENST00000420973 MRS2Q9HD23 443 aa19.61■□□□□ 0.73
CHRD-204ENST00000420973 C9orf84Q5VXU9 1444 aa19.61■□□□□ 0.73
CHRD-204ENST00000420973 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
CHRD-204ENST00000420973 EFCAB2Q5VUJ9 269 aa19.6■□□□□ 0.73
CHRD-204ENST00000420973 TCOF1Q13428 1488 aaKnown RBP19.58■□□□□ 0.73
CHRD-204ENST00000420973 PAK3O75914 559 aaPredicted RBP19.58■□□□□ 0.72
CHRD-204ENST00000420973 CCDC184Q52MB2 194 aa19.58■□□□□ 0.72
CHRD-204ENST00000420973 AKNAQ7Z591 1439 aa19.57■□□□□ 0.72
CHRD-204ENST00000420973 ANKRD30BQ9BXX2 1392 aa19.57■□□□□ 0.72
CHRD-204ENST00000420973 ARHGAP5Q13017 1502 aa19.57■□□□□ 0.72
CHRD-204ENST00000420973 KIF3BO15066 747 aa19.53■□□□□ 0.72
CHRD-204ENST00000420973 ST20-MTHFSA0A0A6YYL1 179 aa19.53■□□□□ 0.72
CHRD-204ENST00000420973 CYB5RLQ6IPT4 315 aa19.52■□□□□ 0.71
CHRD-204ENST00000420973 SPAG9O60271 1321 aaKnown RBP19.51■□□□□ 0.71
CHRD-204ENST00000420973 ROCK1Q13464 1354 aa19.5■□□□□ 0.71
CHRD-204ENST00000420973 GGT6Q6P531 493 aa19.5■□□□□ 0.71
CHRD-204ENST00000420973 OSCARQ8IYS5 282 aa19.5■□□□□ 0.71
CHRD-204ENST00000420973 DENND4BO75064 1496 aaPredicted RBP19.5■□□□□ 0.71
CHRD-204ENST00000420973 CHD1O14646 1710 aa19.49■□□□□ 0.71
CHRD-204ENST00000420973 NBPF1Q3BBV0 1214 aa19.48■□□□□ 0.71
CHRD-204ENST00000420973 KIF7Q2M1P5 1343 aa19.48■□□□□ 0.71
CHRD-204ENST00000420973 BRPF3Q9ULD4 1205 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms