RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 PNNQ9H307 717 aaKnown RBP19.41■□□□□ 0.7
AP000550.1-201ENST00000420508 MS4A1P11836 297 aa19.41■□□□□ 0.7
AP000550.1-201ENST00000420508 NUDCQ9Y266 331 aa19.41■□□□□ 0.7
AP000550.1-201ENST00000420508 EHBP1L1Q8N3D4 1523 aa19.4■□□□□ 0.7
AP000550.1-201ENST00000420508 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
AP000550.1-201ENST00000420508 TIAM1Q13009 1591 aa19.39■□□□□ 0.69
AP000550.1-201ENST00000420508 CHMP4BQ9H444 224 aaKnown RBP19.38■□□□□ 0.69
AP000550.1-201ENST00000420508 MYH16Q9H6N6 1097 aa19.38■□□□□ 0.69
AP000550.1-201ENST00000420508 BIVM-ERCC5R4GMW8 1640 aa19.38■□□□□ 0.69
AP000550.1-201ENST00000420508 L3MBTL2Q969R5 705 aa19.38■□□□□ 0.69
AP000550.1-201ENST00000420508 PHLDB1Q86UU1 1377 aa19.37■□□□□ 0.69
AP000550.1-201ENST00000420508 CUL7Q14999 1698 aa19.37■□□□□ 0.69
AP000550.1-201ENST00000420508 MRC2Q9UBG0 1479 aa19.37■□□□□ 0.69
AP000550.1-201ENST00000420508 IFT140Q96RY7 1462 aa19.36■□□□□ 0.69
AP000550.1-201ENST00000420508 IRX6P78412 446 aaPredicted RBP19.36■□□□□ 0.69
AP000550.1-201ENST00000420508 NCOA2Q15596 1464 aa19.36■□□□□ 0.69
AP000550.1-201ENST00000420508 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
AP000550.1-201ENST00000420508 PTPRGP23470 1445 aa19.35■□□□□ 0.69
AP000550.1-201ENST00000420508 LAMC3Q9Y6N6 1575 aa19.35■□□□□ 0.69
AP000550.1-201ENST00000420508 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
AP000550.1-201ENST00000420508 BECN1Q14457 450 aa19.34■□□□□ 0.69
AP000550.1-201ENST00000420508 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
AP000550.1-201ENST00000420508 POLA1P09884 1462 aaPredicted RBP19.34■□□□□ 0.69
AP000550.1-201ENST00000420508 HDGFP51858 240 aaKnown RBP19.34■□□□□ 0.69
AP000550.1-201ENST00000420508 MIA2Q96PC5 1412 aa19.34■□□□□ 0.69
AP000550.1-201ENST00000420508 HSP90AA1P07900 732 aaKnown RBP19.32■□□□□ 0.68
AP000550.1-201ENST00000420508 HECW1Q76N89 1606 aa19.32■□□□□ 0.68
AP000550.1-201ENST00000420508 ANP32BQ92688 251 aaKnown RBP19.31■□□□□ 0.68
AP000550.1-201ENST00000420508 STAC3Q96MF2 364 aa19.31■□□□□ 0.68
AP000550.1-201ENST00000420508 ANP32EQ9BTT0 268 aa19.3■□□□□ 0.68
AP000550.1-201ENST00000420508 MAPK8IP3Q9UPT6 1336 aa19.3■□□□□ 0.68
AP000550.1-201ENST00000420508 PDE3BQ13370 1112 aa19.29■□□□□ 0.68
AP000550.1-201ENST00000420508 CCDC144AA2RUR9 1427 aa19.29■□□□□ 0.68
AP000550.1-201ENST00000420508 KIF15Q9NS87 1388 aa19.28■□□□□ 0.68
AP000550.1-201ENST00000420508 SPAG9O60271 1321 aaKnown RBP19.27■□□□□ 0.68
AP000550.1-201ENST00000420508 POGKQ9P215 609 aa19.26■□□□□ 0.67
AP000550.1-201ENST00000420508 FOXD1Q16676 465 aa19.25■□□□□ 0.67
AP000550.1-201ENST00000420508 PPM1GO15355 546 aaPredicted RBP19.25■□□□□ 0.67
AP000550.1-201ENST00000420508 CC2D1BQ5T0F9 858 aaKnown RBP19.24■□□□□ 0.67
AP000550.1-201ENST00000420508 NLRP13Q86W25 1043 aa19.23■□□□□ 0.67
AP000550.1-201ENST00000420508 SUPT6HQ7KZ85 1726 aaKnown RBP19.23■□□□□ 0.67
AP000550.1-201ENST00000420508 HNRNPMP52272 730 aaKnown RBP eCLIP19.23■□□□□ 0.67
AP000550.1-201ENST00000420508 HFM1A2PYH4 1435 aa19.22■□□□□ 0.67
AP000550.1-201ENST00000420508 HAP1P54257 671 aaPredicted RBP19.2■□□□□ 0.66
AP000550.1-201ENST00000420508 FTSJ3Q8IY81 847 aaKnown RBP19.2■□□□□ 0.66
AP000550.1-201ENST00000420508 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
AP000550.1-201ENST00000420508 MYBBP1AQ9BQG0 1328 aaKnown RBP19.17■□□□□ 0.66
AP000550.1-201ENST00000420508 MORC1Q86VD1 984 aa19.17■□□□□ 0.66
AP000550.1-201ENST00000420508 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
AP000550.1-201ENST00000420508 USP47Q96K76 1375 aa19.16■□□□□ 0.66
AP000550.1-201ENST00000420508 PLEKHH2Q8IVE3 1493 aa19.15■□□□□ 0.66
AP000550.1-201ENST00000420508 CFAP44Q96MT7 982 aa19.14■□□□□ 0.65
AP000550.1-201ENST00000420508 NESP48681 1621 aa19.14■□□□□ 0.65
AP000550.1-201ENST00000420508 ANKRD50Q9ULJ7 1429 aa19.13■□□□□ 0.65
AP000550.1-201ENST00000420508 ZBED9Q6R2W3 1325 aa19.12■□□□□ 0.65
AP000550.1-201ENST00000420508 PRKRIP1Q9H875 184 aaPredicted RBP19.12■□□□□ 0.65
AP000550.1-201ENST00000420508 KIAA0586Q9BVV6 1533 aa19.12■□□□□ 0.65
AP000550.1-201ENST00000420508 TROQ12816 1431 aaPredicted RBP19.12■□□□□ 0.65
AP000550.1-201ENST00000420508 NGEFQ8N5V2 710 aa19.12■□□□□ 0.65
AP000550.1-201ENST00000420508 RCAN3Q9UKA8 241 aa19.12■□□□□ 0.65
AP000550.1-201ENST00000420508 HDGFL2Q7Z4V5 671 aaPredicted RBP19.12■□□□□ 0.65
AP000550.1-201ENST00000420508 KIF3BO15066 747 aa19.11■□□□□ 0.65
AP000550.1-201ENST00000420508 CALD1Q05682 793 aaKnown RBP19.11■□□□□ 0.65
AP000550.1-201ENST00000420508 CNTLNQ9NXG0 1405 aa19.1■□□□□ 0.65
AP000550.1-201ENST00000420508 IQGAP2Q13576 1575 aa19.1■□□□□ 0.65
AP000550.1-201ENST00000420508 ROCK1Q13464 1354 aa19.1■□□□□ 0.65
AP000550.1-201ENST00000420508 CASC1Q6TDU7 716 aa19.1■□□□□ 0.65
AP000550.1-201ENST00000420508 NOP58Q9Y2X3 529 aaKnown RBP19.09■□□□□ 0.65
AP000550.1-201ENST00000420508 TCERG1O14776 1098 aaKnown RBP19.09■□□□□ 0.65
AP000550.1-201ENST00000420508 PCF11O94913 1555 aaKnown RBP19.08■□□□□ 0.65
AP000550.1-201ENST00000420508 BCL11AQ9H165 835 aa19.08■□□□□ 0.65
AP000550.1-201ENST00000420508 B4GALNT3Q6L9W6 998 aa19.08■□□□□ 0.64
AP000550.1-201ENST00000420508 CCDC7Q96M83 1385 aa19.08■□□□□ 0.64
AP000550.1-201ENST00000420508 GGT6Q6P531 493 aa19.07■□□□□ 0.64
AP000550.1-201ENST00000420508 THOC2Q8NI27 1593 aaKnown RBP19.07■□□□□ 0.64
AP000550.1-201ENST00000420508 NBR1Q14596 966 aa19.07■□□□□ 0.64
AP000550.1-201ENST00000420508 SRPK2P78362 688 aaKnown RBP19.06■□□□□ 0.64
AP000550.1-201ENST00000420508 GOLGA6L22H0YM25 854 aa19.06■□□□□ 0.64
AP000550.1-201ENST00000420508 IPO8O15397 1037 aaKnown RBP19.03■□□□□ 0.64
AP000550.1-201ENST00000420508 EPRSP07814 1512 aaKnown RBP19.03■□□□□ 0.64
AP000550.1-201ENST00000420508 ST20-MTHFSA0A0A6YYL1 179 aa19.03■□□□□ 0.64
AP000550.1-201ENST00000420508 TERF2IPQ9NYB0 399 aa19.02■□□□□ 0.64
AP000550.1-201ENST00000420508 RBM19Q9Y4C8 960 aaKnown RBP19.02■□□□□ 0.64
AP000550.1-201ENST00000420508 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.63
AP000550.1-201ENST00000420508 U2SURPO15042 1029 aaKnown RBP19.01■□□□□ 0.63
AP000550.1-201ENST00000420508 KIAA1107Q9UPP5 1409 aa19.01■□□□□ 0.63
AP000550.1-201ENST00000420508 GOLGA2Q08379 1002 aa19■□□□□ 0.63
AP000550.1-201ENST00000420508 NEUROD2Q15784 382 aa19■□□□□ 0.63
AP000550.1-201ENST00000420508 DAPK1P53355 1430 aa18.99■□□□□ 0.63
AP000550.1-201ENST00000420508 WASHC2CQ9Y4E1 1318 aa18.99■□□□□ 0.63
AP000550.1-201ENST00000420508 FRAT1Q92837 279 aaPredicted RBP18.99■□□□□ 0.63
AP000550.1-201ENST00000420508 MAGI1Q96QZ7 1491 aaPredicted RBP18.98■□□□□ 0.63
AP000550.1-201ENST00000420508 CHMP4AQ9BY43 222 aa18.98■□□□□ 0.63
AP000550.1-201ENST00000420508 WASHC2AQ641Q2 1341 aa18.97■□□□□ 0.63
AP000550.1-201ENST00000420508 ARHGAP5Q13017 1502 aa18.96■□□□□ 0.63
AP000550.1-201ENST00000420508 C9orf84Q5VXU9 1444 aa18.96■□□□□ 0.63
AP000550.1-201ENST00000420508 VGFO15240 615 aaPredicted RBP18.96■□□□□ 0.63
AP000550.1-201ENST00000420508 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
AP000550.1-201ENST00000420508 PLPPR3Q6T4P5 718 aa18.95■□□□□ 0.62
AP000550.1-201ENST00000420508 AKNAQ7Z591 1439 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms