RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 GOLGA6L22H0YM25 854 aa21.31■■□□□ 1
CRTC3-202ENST00000420329 ZBED9Q6R2W3 1325 aa21.3■■□□□ 1
CRTC3-202ENST00000420329 ERCC6Q03468 1493 aa21.3■■□□□ 1
CRTC3-202ENST00000420329 NLRP13Q86W25 1043 aa21.29■■□□□ 1
CRTC3-202ENST00000420329 ARAP1Q96P48 1450 aa21.29■■□□□ 1
CRTC3-202ENST00000420329 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
CRTC3-202ENST00000420329 SYNJ1O43426 1573 aa21.28■■□□□ 1
CRTC3-202ENST00000420329 RRBP1Q9P2E9 1410 aaKnown RBP21.27■□□□□ 0.99
CRTC3-202ENST00000420329 LRRC9Q6ZRR7 1453 aa21.26■□□□□ 0.99
CRTC3-202ENST00000420329 U2SURPO15042 1029 aaKnown RBP21.25■□□□□ 0.99
CRTC3-202ENST00000420329 CARMIL2Q6F5E8 1435 aa21.25■□□□□ 0.99
CRTC3-202ENST00000420329 FGD6Q6ZV73 1430 aa21.24■□□□□ 0.99
CRTC3-202ENST00000420329 ST20-MTHFSA0A0A6YYL1 179 aa21.23■□□□□ 0.99
CRTC3-202ENST00000420329 PDE3BQ13370 1112 aa21.23■□□□□ 0.99
CRTC3-202ENST00000420329 FANCIQ9NVI1 1328 aa21.23■□□□□ 0.99
CRTC3-202ENST00000420329 MS4A1P11836 297 aa21.22■□□□□ 0.99
CRTC3-202ENST00000420329 NCLP19338 710 aaKnown RBP21.22■□□□□ 0.99
CRTC3-202ENST00000420329 MORC1Q86VD1 984 aa21.22■□□□□ 0.99
CRTC3-202ENST00000420329 FGD5Q6ZNL6 1462 aa21.22■□□□□ 0.99
CRTC3-202ENST00000420329 FANCD2Q9BXW9 1451 aa21.21■□□□□ 0.99
CRTC3-202ENST00000420329 KIF15Q9NS87 1388 aa21.21■□□□□ 0.99
CRTC3-202ENST00000420329 UACAQ9BZF9 1416 aa21.2■□□□□ 0.98
CRTC3-202ENST00000420329 ERICH3Q5RHP9 1530 aa21.2■□□□□ 0.98
CRTC3-202ENST00000420329 MYBBP1AQ9BQG0 1328 aaKnown RBP21.2■□□□□ 0.98
CRTC3-202ENST00000420329 HNRNPMP52272 730 aaKnown RBP eCLIP21.19■□□□□ 0.98
CRTC3-202ENST00000420329 KANK1Q14678 1352 aa21.19■□□□□ 0.98
CRTC3-202ENST00000420329 POGKQ9P215 609 aa21.18■□□□□ 0.98
CRTC3-202ENST00000420329 USP47Q96K76 1375 aa21.17■□□□□ 0.98
CRTC3-202ENST00000420329 GOLGA2Q08379 1002 aa21.15■□□□□ 0.98
CRTC3-202ENST00000420329 HSP90AB1P08238 724 aaKnown RBP21.15■□□□□ 0.98
CRTC3-202ENST00000420329 MYOM3Q5VTT5 1437 aa21.14■□□□□ 0.98
CRTC3-202ENST00000420329 CCDC7Q96M83 1385 aa21.14■□□□□ 0.97
CRTC3-202ENST00000420329 SPRYD3Q8NCJ5 442 aa21.14■□□□□ 0.97
CRTC3-202ENST00000420329 EXOC6Q8TAG9 804 aa21.13■□□□□ 0.97
CRTC3-202ENST00000420329 NAP1L5Q96NT1 182 aaPredicted RBP21.13■□□□□ 0.97
CRTC3-202ENST00000420329 CASC1Q6TDU7 716 aa21.12■□□□□ 0.97
CRTC3-202ENST00000420329 PRXQ9BXM0 1461 aa21.12■□□□□ 0.97
CRTC3-202ENST00000420329 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
CRTC3-202ENST00000420329 RRP1P56182 461 aaKnown RBP21.12■□□□□ 0.97
CRTC3-202ENST00000420329 HSCBQ8IWL3 235 aa21.12■□□□□ 0.97
CRTC3-202ENST00000420329 CHMP4BQ9H444 224 aaKnown RBP21.11■□□□□ 0.97
CRTC3-202ENST00000420329 KIF7Q2M1P5 1343 aa21.11■□□□□ 0.97
CRTC3-202ENST00000420329 SLKQ9H2G2 1235 aaPredicted RBP21.1■□□□□ 0.97
CRTC3-202ENST00000420329 CNTLNQ9NXG0 1405 aa21.1■□□□□ 0.97
CRTC3-202ENST00000420329 RAD54L2Q9Y4B4 1467 aa21.1■□□□□ 0.97
CRTC3-202ENST00000420329 PDE4AP27815 886 aa21.1■□□□□ 0.97
CRTC3-202ENST00000420329 CCDC146Q8IYE0 955 aa21.09■□□□□ 0.97
CRTC3-202ENST00000420329 PLIN1O60240 522 aa21.08■□□□□ 0.97
CRTC3-202ENST00000420329 SAFB2Q14151 953 aaKnown RBP eCLIP21.08■□□□□ 0.97
CRTC3-202ENST00000420329 L1TD1Q5T7N2 865 aaKnown RBP21.07■□□□□ 0.96
CRTC3-202ENST00000420329 SRPK2P78362 688 aaKnown RBP21.07■□□□□ 0.96
CRTC3-202ENST00000420329 PANK3Q9H999 370 aa21.07■□□□□ 0.96
CRTC3-202ENST00000420329 CASKIN1Q8WXD9 1431 aa21.07■□□□□ 0.96
CRTC3-202ENST00000420329 PNNQ9H307 717 aaKnown RBP21.07■□□□□ 0.96
CRTC3-202ENST00000420329 CUX1P39880 1505 aa21.05■□□□□ 0.96
CRTC3-202ENST00000420329 EFCAB2Q5VUJ9 269 aa21.05■□□□□ 0.96
CRTC3-202ENST00000420329 U2AF1L5P0DN76 240 aaPredicted RBP21.05■□□□□ 0.96
CRTC3-202ENST00000420329 U2AF1Q01081 240 aaKnown RBP eCLIP21.05■□□□□ 0.96
CRTC3-202ENST00000420329 PTMAP06454 111 aaKnown RBP21.04■□□□□ 0.96
CRTC3-202ENST00000420329 RSPH4AQ5TD94 716 aa21.04■□□□□ 0.96
CRTC3-202ENST00000420329 RWDD1Q9H446 243 aaPredicted RBP21.04■□□□□ 0.96
CRTC3-202ENST00000420329 NCAPD3P42695 1498 aa21.04■□□□□ 0.96
CRTC3-202ENST00000420329 CCDC144AA2RUR9 1427 aa21.03■□□□□ 0.96
CRTC3-202ENST00000420329 NCOA2Q15596 1464 aa21.03■□□□□ 0.96
CRTC3-202ENST00000420329 C14orf37Q86TY3 774 aa21.02■□□□□ 0.96
CRTC3-202ENST00000420329 JPH4Q96JJ6 628 aa21.02■□□□□ 0.96
CRTC3-202ENST00000420329 ZNF644Q9H582 1327 aaPredicted RBP21.02■□□□□ 0.96
CRTC3-202ENST00000420329 CRBNQ96SW2 442 aa21.01■□□□□ 0.95
CRTC3-202ENST00000420329 EIF3AQ14152 1382 aaKnown RBP21■□□□□ 0.95
CRTC3-202ENST00000420329 TOP2BQ02880 1626 aa21■□□□□ 0.95
CRTC3-202ENST00000420329 ZBTB7CA1YPR0 619 aa21■□□□□ 0.95
CRTC3-202ENST00000420329 GGT6Q6P531 493 aa21■□□□□ 0.95
CRTC3-202ENST00000420329 GAPVD1Q14C86 1478 aa21■□□□□ 0.95
CRTC3-202ENST00000420329 TPRNQ4KMQ1 711 aa20.99■□□□□ 0.95
CRTC3-202ENST00000420329 CENPJQ9HC77 1338 aaPredicted RBP20.99■□□□□ 0.95
CRTC3-202ENST00000420329 PMFBP1Q8TBY8 1022 aa20.99■□□□□ 0.95
CRTC3-202ENST00000420329 USP35Q9P2H5 1018 aa20.99■□□□□ 0.95
CRTC3-202ENST00000420329 CLUAP1Q96AJ1 413 aa20.99■□□□□ 0.95
CRTC3-202ENST00000420329 ARID4BQ4LE39 1312 aaPredicted RBP20.99■□□□□ 0.95
CRTC3-202ENST00000420329 PLEKHG5O94827 1062 aa20.98■□□□□ 0.95
CRTC3-202ENST00000420329 CENPQQ7L2Z9 268 aaPredicted RBP20.98■□□□□ 0.95
CRTC3-202ENST00000420329 FYCO1Q9BQS8 1478 aa20.98■□□□□ 0.95
CRTC3-202ENST00000420329 ITPRIPQ8IWB1 547 aa20.98■□□□□ 0.95
CRTC3-202ENST00000420329 IPO8O15397 1037 aaKnown RBP20.97■□□□□ 0.95
CRTC3-202ENST00000420329 STK26Q9P289 416 aa20.97■□□□□ 0.95
CRTC3-202ENST00000420329 GZF1Q9H116 711 aaPredicted RBP20.96■□□□□ 0.95
CRTC3-202ENST00000420329 SLC4A3P48751 1232 aa20.96■□□□□ 0.95
CRTC3-202ENST00000420329 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
CRTC3-202ENST00000420329 KIF3BO15066 747 aa20.95■□□□□ 0.94
CRTC3-202ENST00000420329 FAM161AQ3B820 660 aa20.94■□□□□ 0.94
CRTC3-202ENST00000420329 DNTTIP2Q5QJE6 756 aaKnown RBP20.94■□□□□ 0.94
CRTC3-202ENST00000420329 TIAM1Q13009 1591 aa20.93■□□□□ 0.94
CRTC3-202ENST00000420329 CFTRP13569 1480 aa20.93■□□□□ 0.94
CRTC3-202ENST00000420329 MFAP1P55081 439 aaKnown RBP20.92■□□□□ 0.94
CRTC3-202ENST00000420329 SMC4Q9NTJ3 1288 aa20.92■□□□□ 0.94
CRTC3-202ENST00000420329 SPAG9O60271 1321 aaKnown RBP20.91■□□□□ 0.94
CRTC3-202ENST00000420329 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.9■□□□□ 0.94
CRTC3-202ENST00000420329 RRP7AQ9Y3A4 280 aaKnown RBP20.89■□□□□ 0.93
CRTC3-202ENST00000420329 HFM1A2PYH4 1435 aa20.88■□□□□ 0.93
CRTC3-202ENST00000420329 HDGFL2Q7Z4V5 671 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms