RNA–Protein interactions for RNA: ENST00000420077.5

SEMA4F-204, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best)

Gene SEMA4F, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-204ENST00000420077 KCNH8Q96L42 1107 aa23.84■■□□□ 1.41
SEMA4F-204ENST00000420077 ADCY10Q96PN6 1610 aa23.83■■□□□ 1.41
SEMA4F-204ENST00000420077 ABCC5O15440 1437 aa23.83■■□□□ 1.41
SEMA4F-204ENST00000420077 TROQ12816 1431 aaPredicted RBP23.83■■□□□ 1.41
SEMA4F-204ENST00000420077 TRIM52Q96A61 297 aa23.82■■□□□ 1.4
SEMA4F-204ENST00000420077 PLB1Q6P1J6 1458 aa23.81■■□□□ 1.4
SEMA4F-204ENST00000420077 CARMIL2Q6F5E8 1435 aa23.79■■□□□ 1.4
SEMA4F-204ENST00000420077 MPHOSPH9Q99550 1183 aa23.78■■□□□ 1.4
SEMA4F-204ENST00000420077 PRG4Q92954 1404 aaPredicted RBP23.78■■□□□ 1.4
SEMA4F-204ENST00000420077 KIF14Q15058 1648 aa23.76■■□□□ 1.39
SEMA4F-204ENST00000420077 ZNF644Q9H582 1327 aaPredicted RBP23.76■■□□□ 1.39
SEMA4F-204ENST00000420077 ADGBQ8N7X0 1667 aa23.76■■□□□ 1.39
SEMA4F-204ENST00000420077 CAMSAP2Q08AD1 1489 aa23.75■■□□□ 1.39
SEMA4F-204ENST00000420077 CROCC2H7BZ55 1655 aa23.73■■□□□ 1.39
SEMA4F-204ENST00000420077 CCER2I3L3R5 266 aa23.72■■□□□ 1.39
SEMA4F-204ENST00000420077 GPATCH8Q9UKJ3 1502 aaKnown RBP23.72■■□□□ 1.39
SEMA4F-204ENST00000420077 ANP32CO43423 234 aa23.71■■□□□ 1.39
SEMA4F-204ENST00000420077 ABCA8O94911 1581 aa23.7■■□□□ 1.38
SEMA4F-204ENST00000420077 RPRD2Q5VT52 1461 aaKnown RBP23.68■■□□□ 1.38
SEMA4F-204ENST00000420077 ANKRD30BQ9BXX2 1392 aa23.68■■□□□ 1.38
SEMA4F-204ENST00000420077 SUPT16HQ9Y5B9 1047 aaKnown RBP23.67■■□□□ 1.38
SEMA4F-204ENST00000420077 CFDP1Q9UEE9 299 aaPredicted RBP23.66■■□□□ 1.38
SEMA4F-204ENST00000420077 ADGRL2O95490 1459 aa23.66■■□□□ 1.38
SEMA4F-204ENST00000420077 CDC42BPAQ5VT25 1732 aa23.65■■□□□ 1.38
SEMA4F-204ENST00000420077 FOXD1Q16676 465 aa23.64■■□□□ 1.38
SEMA4F-204ENST00000420077 NCOA1Q15788 1441 aa23.63■■□□□ 1.37
SEMA4F-204ENST00000420077 TEX14Q8IWB6 1497 aa23.63■■□□□ 1.37
SEMA4F-204ENST00000420077 L3MBTL2Q969R5 705 aa23.62■■□□□ 1.37
SEMA4F-204ENST00000420077 HSPA5P11021 654 aaKnown RBP23.61■■□□□ 1.37
SEMA4F-204ENST00000420077 PZPP20742 1482 aa23.61■■□□□ 1.37
SEMA4F-204ENST00000420077 ABCC10Q5T3U5 1492 aa23.59■■□□□ 1.37
SEMA4F-204ENST00000420077 SLC4A1APQ9BWU0 796 aaKnown RBP23.58■■□□□ 1.37
SEMA4F-204ENST00000420077 ATP10BO94823 1461 aa23.58■■□□□ 1.37
SEMA4F-204ENST00000420077 EIF4G2P78344 907 aaKnown RBP eCLIP23.57■■□□□ 1.36
SEMA4F-204ENST00000420077 ERCC6L2Q5T890 1561 aa23.57■■□□□ 1.36
SEMA4F-204ENST00000420077 WASHC2AQ641Q2 1341 aa23.57■■□□□ 1.36
SEMA4F-204ENST00000420077 PLEKHD1A6NEE1 506 aa23.54■■□□□ 1.36
SEMA4F-204ENST00000420077 SHANK2Q9UPX8 1470 aa23.54■■□□□ 1.36
SEMA4F-204ENST00000420077 ZNF777Q9ULD5 760 aaPredicted RBP23.54■■□□□ 1.36
SEMA4F-204ENST00000420077 ANKRD30AQ9BXX3 1397 aa23.53■■□□□ 1.36
SEMA4F-204ENST00000420077 POLR1AO95602 1720 aaPredicted RBP23.51■■□□□ 1.35
SEMA4F-204ENST00000420077 PTPRGP23470 1445 aa23.51■■□□□ 1.35
SEMA4F-204ENST00000420077 KIAA1107Q9UPP5 1409 aa23.49■■□□□ 1.35
SEMA4F-204ENST00000420077 NBPF8Q3BBV2 869 aa23.48■■□□□ 1.35
SEMA4F-204ENST00000420077 CNTLNQ9NXG0 1405 aa23.48■■□□□ 1.35
SEMA4F-204ENST00000420077 ANKRD50Q9ULJ7 1429 aa23.47■■□□□ 1.35
SEMA4F-204ENST00000420077 SHROOM2Q13796 1616 aa23.47■■□□□ 1.35
SEMA4F-204ENST00000420077 CLASP1Q7Z460 1538 aa23.46■■□□□ 1.35
SEMA4F-204ENST00000420077 MBD5Q9P267 1494 aa23.46■■□□□ 1.35
SEMA4F-204ENST00000420077 C9orf84Q5VXU9 1444 aa23.46■■□□□ 1.35
SEMA4F-204ENST00000420077 ARHGEF5Q12774 1597 aa23.45■■□□□ 1.34
SEMA4F-204ENST00000420077 SPATA31E1Q6ZUB1 1445 aa23.44■■□□□ 1.34
SEMA4F-204ENST00000420077 CCDC7Q96M83 1385 aa23.43■■□□□ 1.34
SEMA4F-204ENST00000420077 KDM5DQ9BY66 1539 aa23.42■■□□□ 1.34
SEMA4F-204ENST00000420077 PREX2Q70Z35 1606 aa23.42■■□□□ 1.34
SEMA4F-204ENST00000420077 CDC42BPBQ9Y5S2 1711 aa23.41■■□□□ 1.34
SEMA4F-204ENST00000420077 C11orf95C9JLR9 678 aaPredicted RBP23.39■■□□□ 1.33
SEMA4F-204ENST00000420077 PKD2Q13563 968 aa23.38■■□□□ 1.33
SEMA4F-204ENST00000420077 SAMD9LQ8IVG5 1584 aa23.37■■□□□ 1.33
SEMA4F-204ENST00000420077 OSCARQ8IYS5 282 aa23.35■■□□□ 1.33
SEMA4F-204ENST00000420077 TSPY4P0CV99 314 aa23.33■■□□□ 1.33
SEMA4F-204ENST00000420077 TSPY10P0CW01 314 aa23.33■■□□□ 1.33
SEMA4F-204ENST00000420077 NUP155O75694 1391 aa23.32■■□□□ 1.32
SEMA4F-204ENST00000420077 KIF15Q9NS87 1388 aa23.32■■□□□ 1.32
SEMA4F-204ENST00000420077 CCDC141Q6ZP82 1450 aa23.32■■□□□ 1.32
SEMA4F-204ENST00000420077 FKBP8Q14318 412 aa23.31■■□□□ 1.32
SEMA4F-204ENST00000420077 KIF7Q2M1P5 1343 aa23.31■■□□□ 1.32
SEMA4F-204ENST00000420077 HNRNPMP52272 730 aaKnown RBP eCLIP23.29■■□□□ 1.32
SEMA4F-204ENST00000420077 ARHGEF12Q9NZN5 1544 aa23.29■■□□□ 1.32
SEMA4F-204ENST00000420077 KDM5CP41229 1560 aa23.29■■□□□ 1.32
SEMA4F-204ENST00000420077 TTC37Q6PGP7 1564 aa23.29■■□□□ 1.32
SEMA4F-204ENST00000420077 UHRF1BP1Q6BDS2 1440 aa23.28■■□□□ 1.32
SEMA4F-204ENST00000420077 PRKRIP1Q9H875 184 aaPredicted RBP23.27■■□□□ 1.32
SEMA4F-204ENST00000420077 BCORL1Q5H9F3 1711 aa23.27■■□□□ 1.32
SEMA4F-204ENST00000420077 NEFLP07196 543 aa23.26■■□□□ 1.31
SEMA4F-204ENST00000420077 HNRNPUQ00839 825 aaKnown RBP eCLIP23.25■■□□□ 1.31
SEMA4F-204ENST00000420077 MAST1Q9Y2H9 1570 aa23.25■■□□□ 1.31
SEMA4F-204ENST00000420077 ABCC2Q92887 1545 aa23.25■■□□□ 1.31
SEMA4F-204ENST00000420077 USP47Q96K76 1375 aa23.25■■□□□ 1.31
SEMA4F-204ENST00000420077 RALGAPBQ86X10 1494 aa23.25■■□□□ 1.31
SEMA4F-204ENST00000420077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.25■■□□□ 1.31
SEMA4F-204ENST00000420077 MYO5CQ9NQX4 1742 aa23.24■■□□□ 1.31
SEMA4F-204ENST00000420077 SYCP2Q9BX26 1530 aa23.24■■□□□ 1.31
SEMA4F-204ENST00000420077 RSPH4AQ5TD94 716 aa23.23■■□□□ 1.31
SEMA4F-204ENST00000420077 BCANQ96GW7 911 aa23.22■■□□□ 1.31
SEMA4F-204ENST00000420077 ARHGAP5Q13017 1502 aa23.22■■□□□ 1.31
SEMA4F-204ENST00000420077 FAM135AQ9P2D6 1515 aa23.22■■□□□ 1.31
SEMA4F-204ENST00000420077 CCDC184Q52MB2 194 aa23.2■■□□□ 1.3
SEMA4F-204ENST00000420077 UNC13BO14795 1591 aa23.2■■□□□ 1.3
SEMA4F-204ENST00000420077 ZNF326Q5BKZ1 582 aaKnown RBP23.19■■□□□ 1.3
SEMA4F-204ENST00000420077 PLXNC1O60486 1568 aa23.18■■□□□ 1.3
SEMA4F-204ENST00000420077 TSHZ2Q9NRE2 1034 aa23.17■■□□□ 1.3
SEMA4F-204ENST00000420077 ARID4BQ4LE39 1312 aaPredicted RBP23.16■■□□□ 1.3
SEMA4F-204ENST00000420077 PLEKHH2Q8IVE3 1493 aa23.15■■□□□ 1.3
SEMA4F-204ENST00000420077 DHX29Q7Z478 1369 aaKnown RBP23.14■■□□□ 1.29
SEMA4F-204ENST00000420077 MRS2Q9HD23 443 aa23.13■■□□□ 1.29
SEMA4F-204ENST00000420077 ZCCHC11Q5TAX3 1644 aaKnown RBP23.12■■□□□ 1.29
SEMA4F-204ENST00000420077 UHRF1BP1LA0JNW5 1464 aa23.11■■□□□ 1.29
SEMA4F-204ENST00000420077 IQGAP3Q86VI3 1631 aa23.1■■□□□ 1.29
SEMA4F-204ENST00000420077 CARD11Q9BXL7 1154 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms