RNA–Protein interactions for RNA: ENST00000419830.2

USP8-203, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 2,402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-203ENST00000419830 ROCK1Q13464 1354 aa12.84□□□□□ -0.35
USP8-203ENST00000419830 DAPK1P53355 1430 aa12.84□□□□□ -0.35
USP8-203ENST00000419830 NUP153P49790 1475 aaKnown RBP12.83□□□□□ -0.36
USP8-203ENST00000419830 NBPF8Q3BBV2 869 aa12.82□□□□□ -0.36
USP8-203ENST00000419830 CCDC184Q52MB2 194 aa12.82□□□□□ -0.36
USP8-203ENST00000419830 KIAA0586Q9BVV6 1533 aa12.82□□□□□ -0.36
USP8-203ENST00000419830 HNRNPUQ00839 825 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP8-203ENST00000419830 NCOA1Q15788 1441 aa12.81□□□□□ -0.36
USP8-203ENST00000419830 RPRD2Q5VT52 1461 aaKnown RBP12.81□□□□□ -0.36
USP8-203ENST00000419830 KIAA0556O60303 1618 aa12.8□□□□□ -0.36
USP8-203ENST00000419830 DNMT1P26358 1616 aaKnown RBP12.8□□□□□ -0.36
USP8-203ENST00000419830 CNTLNQ9NXG0 1405 aa12.8□□□□□ -0.36
USP8-203ENST00000419830 TEX14Q8IWB6 1497 aa12.8□□□□□ -0.36
USP8-203ENST00000419830 IFT140Q96RY7 1462 aa12.79□□□□□ -0.36
USP8-203ENST00000419830 CCDC7Q96M83 1385 aa12.79□□□□□ -0.36
USP8-203ENST00000419830 SPATA31E1Q6ZUB1 1445 aa12.78□□□□□ -0.36
USP8-203ENST00000419830 RBM19Q9Y4C8 960 aaKnown RBP12.77□□□□□ -0.37
USP8-203ENST00000419830 PRKRIP1Q9H875 184 aaPredicted RBP12.77□□□□□ -0.37
USP8-203ENST00000419830 RAPGEF6Q8TEU7 1601 aa12.76□□□□□ -0.37
USP8-203ENST00000419830 ANP32EQ9BTT0 268 aa12.76□□□□□ -0.37
USP8-203ENST00000419830 SLC4A1APQ9BWU0 796 aaKnown RBP12.76□□□□□ -0.37
USP8-203ENST00000419830 PRG4Q92954 1404 aaPredicted RBP12.75□□□□□ -0.37
USP8-203ENST00000419830 GRIN2AQ12879 1464 aa12.75□□□□□ -0.37
USP8-203ENST00000419830 PZPP20742 1482 aa12.75□□□□□ -0.37
USP8-203ENST00000419830 KIF7Q2M1P5 1343 aa12.73□□□□□ -0.37
USP8-203ENST00000419830 CDK11AQ9UQ88 783 aaPredicted RBP12.73□□□□□ -0.37
USP8-203ENST00000419830 TROQ12816 1431 aaPredicted RBP12.73□□□□□ -0.37
USP8-203ENST00000419830 IRX6P78412 446 aaPredicted RBP12.72□□□□□ -0.37
USP8-203ENST00000419830 GPATCH8Q9UKJ3 1502 aaKnown RBP12.71□□□□□ -0.37
USP8-203ENST00000419830 CAMSAP2Q08AD1 1489 aa12.71□□□□□ -0.37
USP8-203ENST00000419830 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.38
USP8-203ENST00000419830 PLB1Q6P1J6 1458 aa12.7□□□□□ -0.38
USP8-203ENST00000419830 EIF4G3O43432 1585 aaKnown RBP12.7□□□□□ -0.38
USP8-203ENST00000419830 MBD5Q9P267 1494 aa12.69□□□□□ -0.38
USP8-203ENST00000419830 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
USP8-203ENST00000419830 MRS2Q9HD23 443 aa12.69□□□□□ -0.38
USP8-203ENST00000419830 KIF14Q15058 1648 aa12.68□□□□□ -0.38
USP8-203ENST00000419830 POLR1AO95602 1720 aaPredicted RBP12.68□□□□□ -0.38
USP8-203ENST00000419830 ADGRL2O95490 1459 aa12.68□□□□□ -0.38
USP8-203ENST00000419830 CEP170Q5SW79 1584 aa12.68□□□□□ -0.38
USP8-203ENST00000419830 KIAA1107Q9UPP5 1409 aa12.67□□□□□ -0.38
USP8-203ENST00000419830 ADCY10Q96PN6 1610 aa12.66□□□□□ -0.38
USP8-203ENST00000419830 ZBED9Q6R2W3 1325 aa12.66□□□□□ -0.38
USP8-203ENST00000419830 DHX29Q7Z478 1369 aaKnown RBP12.66□□□□□ -0.38
USP8-203ENST00000419830 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
USP8-203ENST00000419830 ADGBQ8N7X0 1667 aa12.65□□□□□ -0.38
USP8-203ENST00000419830 PKD2Q13563 968 aa12.65□□□□□ -0.38
USP8-203ENST00000419830 ERICH6BQ5W0A0 696 aa12.65□□□□□ -0.38
USP8-203ENST00000419830 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
USP8-203ENST00000419830 ITSN2Q9NZM3 1697 aa12.65□□□□□ -0.38
USP8-203ENST00000419830 CHMP7Q8WUX9 453 aaPredicted RBP12.64□□□□□ -0.39
USP8-203ENST00000419830 BCORL1Q5H9F3 1711 aa12.64□□□□□ -0.39
USP8-203ENST00000419830 CROCC2H7BZ55 1655 aa12.64□□□□□ -0.39
USP8-203ENST00000419830 SYNJ2O15056 1496 aa12.63□□□□□ -0.39
USP8-203ENST00000419830 JPH4Q96JJ6 628 aa12.63□□□□□ -0.39
USP8-203ENST00000419830 ANKRD30AQ9BXX3 1397 aa12.63□□□□□ -0.39
USP8-203ENST00000419830 MSH5O43196 834 aa12.62□□□□□ -0.39
USP8-203ENST00000419830 USP47Q96K76 1375 aa12.62□□□□□ -0.39
USP8-203ENST00000419830 PPP4R2Q9NY27 417 aa12.62□□□□□ -0.39
USP8-203ENST00000419830 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
USP8-203ENST00000419830 NUP160Q12769 1436 aa12.61□□□□□ -0.39
USP8-203ENST00000419830 ABCC10Q5T3U5 1492 aa12.6□□□□□ -0.39
USP8-203ENST00000419830 FBLN2P98095 1184 aa12.6□□□□□ -0.39
USP8-203ENST00000419830 KDM5CP41229 1560 aa12.59□□□□□ -0.39
USP8-203ENST00000419830 UHRF1BP1Q6BDS2 1440 aa12.59□□□□□ -0.39
USP8-203ENST00000419830 CARMIL2Q6F5E8 1435 aa12.59□□□□□ -0.39
USP8-203ENST00000419830 ZNF326Q5BKZ1 582 aaKnown RBP12.59□□□□□ -0.39
USP8-203ENST00000419830 CDC42BPAQ5VT25 1732 aa12.59□□□□□ -0.39
USP8-203ENST00000419830 ATP10BO94823 1461 aa12.58□□□□□ -0.39
USP8-203ENST00000419830 ABCA8O94911 1581 aa12.58□□□□□ -0.4
USP8-203ENST00000419830 PLEKHD1A6NEE1 506 aa12.58□□□□□ -0.4
USP8-203ENST00000419830 NUP155O75694 1391 aa12.57□□□□□ -0.4
USP8-203ENST00000419830 ARID4BQ4LE39 1312 aaPredicted RBP12.57□□□□□ -0.4
USP8-203ENST00000419830 FANCIQ9NVI1 1328 aa12.57□□□□□ -0.4
USP8-203ENST00000419830 C9orf84Q5VXU9 1444 aa12.57□□□□□ -0.4
USP8-203ENST00000419830 SHANK2Q9UPX8 1470 aa12.56□□□□□ -0.4
USP8-203ENST00000419830 RALGAPBQ86X10 1494 aa12.56□□□□□ -0.4
USP8-203ENST00000419830 SMG6Q86US8 1419 aaKnown RBP12.55□□□□□ -0.4
USP8-203ENST00000419830 B4GALNT3Q6L9W6 998 aa12.55□□□□□ -0.4
USP8-203ENST00000419830 ERCC6Q03468 1493 aa12.55□□□□□ -0.4
USP8-203ENST00000419830 KDM5DQ9BY66 1539 aa12.55□□□□□ -0.4
USP8-203ENST00000419830 CNGB1Q14028 1251 aaPredicted RBP12.54□□□□□ -0.4
USP8-203ENST00000419830 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
USP8-203ENST00000419830 PTPRGP23470 1445 aa12.54□□□□□ -0.4
USP8-203ENST00000419830 PNISRQ8TF01 805 aaKnown RBP12.53□□□□□ -0.4
USP8-203ENST00000419830 ARHGEF12Q9NZN5 1544 aa12.53□□□□□ -0.4
USP8-203ENST00000419830 HNRNPMP52272 730 aaKnown RBP eCLIP12.53□□□□□ -0.4
USP8-203ENST00000419830 RNF123Q5XPI4 1314 aa12.53□□□□□ -0.4
USP8-203ENST00000419830 CARD11Q9BXL7 1154 aa12.52□□□□□ -0.4
USP8-203ENST00000419830 ST20-MTHFSA0A0A6YYL1 179 aa12.51□□□□□ -0.41
USP8-203ENST00000419830 TSPY4P0CV99 314 aa12.51□□□□□ -0.41
USP8-203ENST00000419830 TSPY10P0CW01 314 aa12.51□□□□□ -0.41
USP8-203ENST00000419830 KIF15Q9NS87 1388 aa12.51□□□□□ -0.41
USP8-203ENST00000419830 KDM2AQ9Y2K7 1162 aa12.51□□□□□ -0.41
USP8-203ENST00000419830 ROCK2O75116 1388 aaKnown RBP12.51□□□□□ -0.41
USP8-203ENST00000419830 NUDCQ9Y266 331 aa12.5□□□□□ -0.41
USP8-203ENST00000419830 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
USP8-203ENST00000419830 ARHGEF5Q12774 1597 aa12.49□□□□□ -0.41
USP8-203ENST00000419830 SENP3-EIF4A1A0A087X0R7 540 aa12.48□□□□□ -0.41
USP8-203ENST00000419830 LRPPRCP42704 1394 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms