RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.21■□□□□ 0.51
RAPGEF1-205ENST00000419442 DMRT2Q9Y5R5 561 aa18.18■□□□□ 0.5
RAPGEF1-205ENST00000419442 SETD1BQ9UPS6 1966 aaKnown RBP18.17■□□□□ 0.5
RAPGEF1-205ENST00000419442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.15■□□□□ 0.5
RAPGEF1-205ENST00000419442 HNRNPUL2Q1KMD3 747 aaKnown RBP18.15■□□□□ 0.5
RAPGEF1-205ENST00000419442 MLECQ14165 292 aa18.14■□□□□ 0.49
RAPGEF1-205ENST00000419442 PTPRTO14522 1441 aa18.14■□□□□ 0.49
RAPGEF1-205ENST00000419442 ATP10AO60312 1499 aa18.14■□□□□ 0.49
RAPGEF1-205ENST00000419442 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.49
RAPGEF1-205ENST00000419442 PLEKHD1A6NEE1 506 aa18.13■□□□□ 0.49
RAPGEF1-205ENST00000419442 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
RAPGEF1-205ENST00000419442 LTBP4Q8N2S1 1624 aa18.12■□□□□ 0.49
RAPGEF1-205ENST00000419442 UHRF1BP1Q6BDS2 1440 aa18.11■□□□□ 0.49
RAPGEF1-205ENST00000419442 SCAPERQ9BY12 1400 aa18.09■□□□□ 0.49
RAPGEF1-205ENST00000419442 CEBPAP49715 358 aaPredicted RBP18.08■□□□□ 0.48
RAPGEF1-205ENST00000419442 PLCH2O75038 1416 aa18.06■□□□□ 0.48
RAPGEF1-205ENST00000419442 C3P01024 1663 aa18.05■□□□□ 0.48
RAPGEF1-205ENST00000419442 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
RAPGEF1-205ENST00000419442 KDM5CP41229 1560 aa18.02■□□□□ 0.48
RAPGEF1-205ENST00000419442 MYO5CQ9NQX4 1742 aa18.02■□□□□ 0.48
RAPGEF1-205ENST00000419442 DIP2CQ9Y2E4 1556 aa17.99■□□□□ 0.47
RAPGEF1-205ENST00000419442 NCOA1Q15788 1441 aa17.98■□□□□ 0.47
RAPGEF1-205ENST00000419442 CDK13Q14004 1512 aaKnown RBP17.98■□□□□ 0.47
RAPGEF1-205ENST00000419442 ZNF518AQ6AHZ1 1483 aa17.98■□□□□ 0.47
RAPGEF1-205ENST00000419442 AGLP35573 1532 aa17.96■□□□□ 0.47
RAPGEF1-205ENST00000419442 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
RAPGEF1-205ENST00000419442 TRAPPC8Q9Y2L5 1435 aa17.95■□□□□ 0.46
RAPGEF1-205ENST00000419442 ABCA6Q8N139 1617 aa17.94■□□□□ 0.46
RAPGEF1-205ENST00000419442 EFCAB2Q5VUJ9 269 aa17.94■□□□□ 0.46
RAPGEF1-205ENST00000419442 MLH3Q9UHC1 1453 aa17.91■□□□□ 0.46
RAPGEF1-205ENST00000419442 KIF14Q15058 1648 aa17.9■□□□□ 0.46
RAPGEF1-205ENST00000419442 CAMSAP1Q5T5Y3 1602 aa17.9■□□□□ 0.46
RAPGEF1-205ENST00000419442 MROH2AA6NES4 1674 aa17.88■□□□□ 0.45
RAPGEF1-205ENST00000419442 AFAP1Q8N556 730 aa17.88■□□□□ 0.45
RAPGEF1-205ENST00000419442 CNTLNQ9NXG0 1405 aa17.88■□□□□ 0.45
RAPGEF1-205ENST00000419442 NPATQ14207 1427 aa17.86■□□□□ 0.45
RAPGEF1-205ENST00000419442 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
RAPGEF1-205ENST00000419442 RANGAP1P46060 587 aaPredicted RBP17.85■□□□□ 0.45
RAPGEF1-205ENST00000419442 CDC42BPBQ9Y5S2 1711 aa17.85■□□□□ 0.45
RAPGEF1-205ENST00000419442 ZNF142P52746 1687 aaPredicted RBP17.83■□□□□ 0.45
RAPGEF1-205ENST00000419442 MED1Q15648 1581 aaPredicted RBP17.83■□□□□ 0.45
RAPGEF1-205ENST00000419442 UBAP1LF5GYI3 381 aa17.83■□□□□ 0.44
RAPGEF1-205ENST00000419442 KIDINS220Q9ULH0 1771 aa17.83■□□□□ 0.44
RAPGEF1-205ENST00000419442 PLA2R1Q13018 1463 aa17.82■□□□□ 0.44
RAPGEF1-205ENST00000419442 EEA1Q15075 1411 aa17.82■□□□□ 0.44
RAPGEF1-205ENST00000419442 ZNF335Q9H4Z2 1342 aaPredicted RBP17.82■□□□□ 0.44
RAPGEF1-205ENST00000419442 ITSN2Q9NZM3 1697 aa17.82■□□□□ 0.44
RAPGEF1-205ENST00000419442 ABCC1P33527 1531 aa17.82■□□□□ 0.44
RAPGEF1-205ENST00000419442 TROQ12816 1431 aaPredicted RBP17.81■□□□□ 0.44
RAPGEF1-205ENST00000419442 ESF1Q9H501 851 aaKnown RBP17.8■□□□□ 0.44
RAPGEF1-205ENST00000419442 TCOF1Q13428 1488 aaKnown RBP17.79■□□□□ 0.44
RAPGEF1-205ENST00000419442 PREX2Q70Z35 1606 aa17.79■□□□□ 0.44
RAPGEF1-205ENST00000419442 MYO3AQ8NEV4 1616 aa17.79■□□□□ 0.44
RAPGEF1-205ENST00000419442 CDK11AQ9UQ88 783 aaPredicted RBP17.78■□□□□ 0.44
RAPGEF1-205ENST00000419442 SUPT6HQ7KZ85 1726 aaKnown RBP17.78■□□□□ 0.44
RAPGEF1-205ENST00000419442 NCKAP5LQ9HCH0 1330 aa17.77■□□□□ 0.44
RAPGEF1-205ENST00000419442 FMN1Q68DA7 1419 aa17.77■□□□□ 0.44
RAPGEF1-205ENST00000419442 LRRIQ1Q96JM4 1722 aa17.77■□□□□ 0.44
RAPGEF1-205ENST00000419442 MYT1LQ9UL68 1186 aa17.76■□□□□ 0.43
RAPGEF1-205ENST00000419442 PKD2Q13563 968 aa17.75■□□□□ 0.43
RAPGEF1-205ENST00000419442 CEP170BQ9Y4F5 1589 aaPredicted RBP17.74■□□□□ 0.43
RAPGEF1-205ENST00000419442 CLIP1P30622 1438 aa17.74■□□□□ 0.43
RAPGEF1-205ENST00000419442 ZMYM3Q14202 1370 aa17.74■□□□□ 0.43
RAPGEF1-205ENST00000419442 CLTCQ00610 1675 aaKnown RBP17.72■□□□□ 0.43
RAPGEF1-205ENST00000419442 HSPA1LP34931 641 aa17.7■□□□□ 0.42
RAPGEF1-205ENST00000419442 PTPRKQ15262 1439 aa17.7■□□□□ 0.42
RAPGEF1-205ENST00000419442 SAMD9LQ8IVG5 1584 aa17.7■□□□□ 0.42
RAPGEF1-205ENST00000419442 CDC42BPAQ5VT25 1732 aa17.69■□□□□ 0.42
RAPGEF1-205ENST00000419442 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
RAPGEF1-205ENST00000419442 PLXNC1O60486 1568 aa17.68■□□□□ 0.42
RAPGEF1-205ENST00000419442 CPS1P31327 1500 aa17.67■□□□□ 0.42
RAPGEF1-205ENST00000419442 PPP6R1Q9UPN7 881 aa17.67■□□□□ 0.42
RAPGEF1-205ENST00000419442 ATP1B4Q9UN42 357 aaPredicted RBP17.66■□□□□ 0.42
RAPGEF1-205ENST00000419442 POLR1AO95602 1720 aaPredicted RBP17.66■□□□□ 0.42
RAPGEF1-205ENST00000419442 DNMT1P26358 1616 aaKnown RBP17.64■□□□□ 0.41
RAPGEF1-205ENST00000419442 ALKQ9UM73 1620 aa17.64■□□□□ 0.41
RAPGEF1-205ENST00000419442 NEURL4Q96JN8 1562 aa17.63■□□□□ 0.41
RAPGEF1-205ENST00000419442 TOM1O60784 492 aa17.63■□□□□ 0.41
RAPGEF1-205ENST00000419442 A2ML1A8K2U0 1454 aa17.63■□□□□ 0.41
RAPGEF1-205ENST00000419442 INO80Q9ULG1 1556 aaPredicted RBP17.62■□□□□ 0.41
RAPGEF1-205ENST00000419442 SHANK2Q9UPX8 1470 aa17.61■□□□□ 0.41
RAPGEF1-205ENST00000419442 ATP7AQ04656 1500 aa17.61■□□□□ 0.41
RAPGEF1-205ENST00000419442 SYCP2Q9BX26 1530 aa17.6■□□□□ 0.41
RAPGEF1-205ENST00000419442 A2MP01023 1474 aa17.59■□□□□ 0.41
RAPGEF1-205ENST00000419442 PIP4K2BP78356 416 aa17.59■□□□□ 0.41
RAPGEF1-205ENST00000419442 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.4
RAPGEF1-205ENST00000419442 VWDEQ8N2E2 1590 aa17.57■□□□□ 0.4
RAPGEF1-205ENST00000419442 CCDC18Q5T9S5 1454 aa17.57■□□□□ 0.4
RAPGEF1-205ENST00000419442 SPAG9O60271 1321 aaKnown RBP17.57■□□□□ 0.4
RAPGEF1-205ENST00000419442 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
RAPGEF1-205ENST00000419442 ADGBQ8N7X0 1667 aa17.55■□□□□ 0.4
RAPGEF1-205ENST00000419442 KIAA1107Q9UPP5 1409 aa17.55■□□□□ 0.4
RAPGEF1-205ENST00000419442 CASKIN1Q8WXD9 1431 aa17.53■□□□□ 0.4
RAPGEF1-205ENST00000419442 GPATCH8Q9UKJ3 1502 aaKnown RBP17.52■□□□□ 0.4
RAPGEF1-205ENST00000419442 PLEKHH2Q8IVE3 1493 aa17.51■□□□□ 0.39
RAPGEF1-205ENST00000419442 DEPDC5O75140 1603 aa17.5■□□□□ 0.39
RAPGEF1-205ENST00000419442 MED14O60244 1454 aa17.5■□□□□ 0.39
RAPGEF1-205ENST00000419442 HNRNPMP52272 730 aaKnown RBP eCLIP17.49■□□□□ 0.39
RAPGEF1-205ENST00000419442 GGT6Q6P531 493 aa17.49■□□□□ 0.39
RAPGEF1-205ENST00000419442 STRCP1A6NGW2 1772 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms