RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-208ENST00000419205 CAMSAP2Q08AD1 1489 aa29.87■■■□□ 2.37
FAM3A-208ENST00000419205 CENPBP07199 599 aaPredicted RBP29.84■■■□□ 2.37
FAM3A-208ENST00000419205 PPP1R15AO75807 674 aaPredicted RBP29.83■■■□□ 2.37
FAM3A-208ENST00000419205 PTPRGP23470 1445 aa29.82■■■□□ 2.36
FAM3A-208ENST00000419205 ZNF644Q9H582 1327 aaPredicted RBP29.82■■■□□ 2.36
FAM3A-208ENST00000419205 CROCC2H7BZ55 1655 aa29.82■■■□□ 2.36
FAM3A-208ENST00000419205 ADGBQ8N7X0 1667 aa29.82■■■□□ 2.36
FAM3A-208ENST00000419205 DENND4BO75064 1496 aaPredicted RBP29.81■■■□□ 2.36
FAM3A-208ENST00000419205 CDC42BPAQ5VT25 1732 aa29.81■■■□□ 2.36
FAM3A-208ENST00000419205 ABCC10Q5T3U5 1492 aa29.8■■■□□ 2.36
FAM3A-208ENST00000419205 TONSLQ96HA7 1378 aa29.8■■■□□ 2.36
FAM3A-208ENST00000419205 PLEKHD1A6NEE1 506 aa29.79■■■□□ 2.36
FAM3A-208ENST00000419205 CFDP1Q9UEE9 299 aaPredicted RBP29.79■■■□□ 2.36
FAM3A-208ENST00000419205 ADGRL2O95490 1459 aa29.74■■■□□ 2.35
FAM3A-208ENST00000419205 TRIM52Q96A61 297 aa29.71■■■□□ 2.35
FAM3A-208ENST00000419205 SCAF1Q9H7N4 1312 aaKnown RBP29.7■■■□□ 2.35
FAM3A-208ENST00000419205 KDM5BQ9UGL1 1544 aa29.7■■■□□ 2.34
FAM3A-208ENST00000419205 MPHOSPH9Q99550 1183 aa29.68■■■□□ 2.34
FAM3A-208ENST00000419205 NCOA1Q15788 1441 aa29.67■■■□□ 2.34
FAM3A-208ENST00000419205 CLASP1Q7Z460 1538 aa29.65■■■□□ 2.34
FAM3A-208ENST00000419205 SHANK2Q9UPX8 1470 aa29.65■■■□□ 2.34
FAM3A-208ENST00000419205 ERCC6L2Q5T890 1561 aa29.6■■■□□ 2.33
FAM3A-208ENST00000419205 ABCC2Q92887 1545 aa29.6■■■□□ 2.33
FAM3A-208ENST00000419205 ZNF777Q9ULD5 760 aaPredicted RBP29.59■■■□□ 2.33
FAM3A-208ENST00000419205 PREX2Q70Z35 1606 aa29.59■■■□□ 2.33
FAM3A-208ENST00000419205 ARHGEF5Q12774 1597 aa29.58■■■□□ 2.33
FAM3A-208ENST00000419205 ANKRD30AQ9BXX3 1397 aa29.58■■■□□ 2.33
FAM3A-208ENST00000419205 CDC42BPBQ9Y5S2 1711 aa29.55■■■□□ 2.32
FAM3A-208ENST00000419205 ANKRD30BQ9BXX2 1392 aa29.54■■■□□ 2.32
FAM3A-208ENST00000419205 PZPP20742 1482 aa29.52■■■□□ 2.32
FAM3A-208ENST00000419205 YTHDC1Q96MU7 727 aaKnown RBP29.52■■■□□ 2.32
FAM3A-208ENST00000419205 C9orf84Q5VXU9 1444 aa29.51■■■□□ 2.31
FAM3A-208ENST00000419205 RPRD2Q5VT52 1461 aaKnown RBP29.51■■■□□ 2.31
FAM3A-208ENST00000419205 SAMD9LQ8IVG5 1584 aa29.49■■■□□ 2.31
FAM3A-208ENST00000419205 MBD5Q9P267 1494 aa29.47■■■□□ 2.31
FAM3A-208ENST00000419205 UHRF1BP1LA0JNW5 1464 aa29.46■■■□□ 2.31
FAM3A-208ENST00000419205 ANKRD50Q9ULJ7 1429 aa29.46■■■□□ 2.31
FAM3A-208ENST00000419205 SLC4A1APQ9BWU0 796 aaKnown RBP29.46■■■□□ 2.31
FAM3A-208ENST00000419205 TTC37Q6PGP7 1564 aa29.45■■■□□ 2.31
FAM3A-208ENST00000419205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.44■■■□□ 2.3
FAM3A-208ENST00000419205 FOXD1Q16676 465 aa29.42■■■□□ 2.3
FAM3A-208ENST00000419205 CCDC141Q6ZP82 1450 aa29.42■■■□□ 2.3
FAM3A-208ENST00000419205 MYO5CQ9NQX4 1742 aa29.41■■■□□ 2.3
FAM3A-208ENST00000419205 TEX14Q8IWB6 1497 aa29.41■■■□□ 2.3
FAM3A-208ENST00000419205 ZCCHC11Q5TAX3 1644 aaKnown RBP29.4■■■□□ 2.3
FAM3A-208ENST00000419205 KDM5DQ9BY66 1539 aa29.4■■■□□ 2.3
FAM3A-208ENST00000419205 TSPY4P0CV99 314 aa29.39■■■□□ 2.3
FAM3A-208ENST00000419205 TSPY10P0CW01 314 aa29.39■■■□□ 2.3
FAM3A-208ENST00000419205 RSPH4AQ5TD94 716 aa29.39■■■□□ 2.29
FAM3A-208ENST00000419205 KIAA1107Q9UPP5 1409 aa29.38■■■□□ 2.29
FAM3A-208ENST00000419205 DDX10Q13206 875 aaKnown RBP29.38■■■□□ 2.29
FAM3A-208ENST00000419205 MAST1Q9Y2H9 1570 aa29.37■■■□□ 2.29
FAM3A-208ENST00000419205 L3MBTL2Q969R5 705 aa29.36■■■□□ 2.29
FAM3A-208ENST00000419205 ARHGAP5Q13017 1502 aa29.35■■■□□ 2.29
FAM3A-208ENST00000419205 HNRNPMP52272 730 aaKnown RBP eCLIP29.34■■■□□ 2.29
FAM3A-208ENST00000419205 HIRIP3Q9BW71 556 aaPredicted RBP29.34■■■□□ 2.29
FAM3A-208ENST00000419205 GTF3C3Q9Y5Q9 886 aa29.33■■■□□ 2.29
FAM3A-208ENST00000419205 KIF15Q9NS87 1388 aa29.33■■■□□ 2.29
FAM3A-208ENST00000419205 PLEKHH2Q8IVE3 1493 aa29.32■■■□□ 2.28
FAM3A-208ENST00000419205 SYCP2Q9BX26 1530 aa29.31■■■□□ 2.28
FAM3A-208ENST00000419205 PLXNC1O60486 1568 aa29.24■■■□□ 2.27
FAM3A-208ENST00000419205 PKD2Q13563 968 aa29.24■■■□□ 2.27
FAM3A-208ENST00000419205 NUP155O75694 1391 aa29.24■■■□□ 2.27
FAM3A-208ENST00000419205 PLCH2O75038 1416 aa29.22■■■□□ 2.27
FAM3A-208ENST00000419205 HSPA5P11021 654 aaKnown RBP29.21■■■□□ 2.27
FAM3A-208ENST00000419205 EIF4G2P78344 907 aaKnown RBP eCLIP29.21■■■□□ 2.27
FAM3A-208ENST00000419205 UNC13BO14795 1591 aa29.18■■■□□ 2.26
FAM3A-208ENST00000419205 NBPF8Q3BBV2 869 aa29.16■■■□□ 2.26
FAM3A-208ENST00000419205 ARAP3Q8WWN8 1544 aa29.16■■■□□ 2.26
FAM3A-208ENST00000419205 ABCC1P33527 1531 aa29.14■■■□□ 2.26
FAM3A-208ENST00000419205 ARHGEF12Q9NZN5 1544 aa29.14■■■□□ 2.26
FAM3A-208ENST00000419205 CCER2I3L3R5 266 aa29.13■■■□□ 2.25
FAM3A-208ENST00000419205 KCNH8Q96L42 1107 aa29.13■■■□□ 2.25
FAM3A-208ENST00000419205 FAM135AQ9P2D6 1515 aa29.13■■■□□ 2.25
FAM3A-208ENST00000419205 ANP32CO43423 234 aa29.13■■■□□ 2.25
FAM3A-208ENST00000419205 POLR1AO95602 1720 aaPredicted RBP29.11■■■□□ 2.25
FAM3A-208ENST00000419205 WASHC2AQ641Q2 1341 aa29.09■■■□□ 2.25
FAM3A-208ENST00000419205 EFCAB2Q5VUJ9 269 aa29.09■■■□□ 2.25
FAM3A-208ENST00000419205 DUOX2Q9NRD8 1548 aa29.09■■■□□ 2.25
FAM3A-208ENST00000419205 SPATA31E1Q6ZUB1 1445 aa29.09■■■□□ 2.25
FAM3A-208ENST00000419205 WDR7Q9Y4E6 1490 aa29.06■■■□□ 2.24
FAM3A-208ENST00000419205 UHRF1BP1Q6BDS2 1440 aa29.06■■■□□ 2.24
FAM3A-208ENST00000419205 IQGAP3Q86VI3 1631 aa29.05■■■□□ 2.24
FAM3A-208ENST00000419205 ERBINQ96RT1 1412 aa29.04■■■□□ 2.24
FAM3A-208ENST00000419205 MAGI2Q86UL8 1455 aa29.02■■■□□ 2.24
FAM3A-208ENST00000419205 ABCA9Q8IUA7 1624 aa29■■■□□ 2.23
FAM3A-208ENST00000419205 CCDC7Q96M83 1385 aa28.99■■■□□ 2.23
FAM3A-208ENST00000419205 CNTLNQ9NXG0 1405 aa28.99■■■□□ 2.23
FAM3A-208ENST00000419205 TRAPPC8Q9Y2L5 1435 aa28.97■■■□□ 2.23
FAM3A-208ENST00000419205 RALGAPBQ86X10 1494 aa28.97■■■□□ 2.23
FAM3A-208ENST00000419205 RTEL1-TNFRSF6BF6WH68 1400 aa28.95■■■□□ 2.23
FAM3A-208ENST00000419205 KDM5CP41229 1560 aa28.93■■■□□ 2.22
FAM3A-208ENST00000419205 C11orf95C9JLR9 678 aaPredicted RBP28.91■■■□□ 2.22
FAM3A-208ENST00000419205 ZFYVE16Q7Z3T8 1539 aa28.91■■■□□ 2.22
FAM3A-208ENST00000419205 CCDC144AA2RUR9 1427 aa28.88■■■□□ 2.21
FAM3A-208ENST00000419205 USP47Q96K76 1375 aa28.88■■■□□ 2.21
FAM3A-208ENST00000419205 OSCARQ8IYS5 282 aa28.88■■■□□ 2.21
FAM3A-208ENST00000419205 FANCAO15360 1455 aa28.87■■■□□ 2.21
FAM3A-208ENST00000419205 ATP10AO60312 1499 aa28.87■■■□□ 2.21
FAM3A-208ENST00000419205 PLA2R1Q13018 1463 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms