RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 TRPM1Q7Z4N2 1603 aa6.74□□□□□ -1.33
GPCPD1-202ENST00000418646 PZPP20742 1482 aa6.74□□□□□ -1.33
GPCPD1-202ENST00000418646 IQGAP3Q86VI3 1631 aa6.74□□□□□ -1.33
GPCPD1-202ENST00000418646 RPRD2Q5VT52 1461 aaKnown RBP6.73□□□□□ -1.33
GPCPD1-202ENST00000418646 PPP1R15AO75807 674 aaPredicted RBP6.72□□□□□ -1.33
GPCPD1-202ENST00000418646 CHD1O14646 1710 aa6.72□□□□□ -1.33
GPCPD1-202ENST00000418646 UHRF1BP1Q6BDS2 1440 aa6.72□□□□□ -1.33
GPCPD1-202ENST00000418646 CDK13Q14004 1512 aaKnown RBP6.71□□□□□ -1.33
GPCPD1-202ENST00000418646 CCER1Q8TC90 406 aaPredicted RBP6.71□□□□□ -1.33
GPCPD1-202ENST00000418646 ZMYM4Q5VZL5 1548 aa6.71□□□□□ -1.34
GPCPD1-202ENST00000418646 UBTFP17480 764 aaKnown RBP6.71□□□□□ -1.34
GPCPD1-202ENST00000418646 CLASP1Q7Z460 1538 aa6.71□□□□□ -1.34
GPCPD1-202ENST00000418646 KIAA1210Q9ULL0 1709 aa6.71□□□□□ -1.34
GPCPD1-202ENST00000418646 ZNF608Q9ULD9 1512 aaPredicted RBP6.71□□□□□ -1.34
GPCPD1-202ENST00000418646 VWDEQ8N2E2 1590 aa6.71□□□□□ -1.34
GPCPD1-202ENST00000418646 IQGAP1P46940 1657 aa6.7□□□□□ -1.34
GPCPD1-202ENST00000418646 SAMD9LQ8IVG5 1584 aa6.7□□□□□ -1.34
GPCPD1-202ENST00000418646 CEP152O94986 1710 aa6.7□□□□□ -1.34
GPCPD1-202ENST00000418646 ARAP3Q8WWN8 1544 aa6.7□□□□□ -1.34
GPCPD1-202ENST00000418646 SYNJ2O15056 1496 aa6.7□□□□□ -1.34
GPCPD1-202ENST00000418646 RIMBP3CA6NJZ7 1639 aa6.7□□□□□ -1.34
GPCPD1-202ENST00000418646 RIMBP3BA6NNM3 1639 aa6.7□□□□□ -1.34
GPCPD1-202ENST00000418646 RIMBP3Q9UFD9 1639 aa6.7□□□□□ -1.34
GPCPD1-202ENST00000418646 DAPK1P53355 1430 aa6.69□□□□□ -1.34
GPCPD1-202ENST00000418646 ATP10AO60312 1499 aa6.69□□□□□ -1.34
GPCPD1-202ENST00000418646 ZC3H13Q5T200 1668 aaKnown RBP6.69□□□□□ -1.34
GPCPD1-202ENST00000418646 NCOA1Q15788 1441 aa6.69□□□□□ -1.34
GPCPD1-202ENST00000418646 MYOM1P52179 1685 aa6.68□□□□□ -1.34
GPCPD1-202ENST00000418646 SPHKAPQ2M3C7 1700 aa6.68□□□□□ -1.34
GPCPD1-202ENST00000418646 ABCC5O15440 1437 aa6.68□□□□□ -1.34
GPCPD1-202ENST00000418646 MYO3AQ8NEV4 1616 aa6.68□□□□□ -1.34
GPCPD1-202ENST00000418646 MIER1Q8N108 512 aa6.67□□□□□ -1.34
GPCPD1-202ENST00000418646 CAMSAP2Q08AD1 1489 aa6.67□□□□□ -1.34
GPCPD1-202ENST00000418646 GPATCH8Q9UKJ3 1502 aaKnown RBP6.67□□□□□ -1.34
GPCPD1-202ENST00000418646 ABCA9Q8IUA7 1624 aa6.66□□□□□ -1.34
GPCPD1-202ENST00000418646 EIF2AK4Q9P2K8 1649 aaKnown RBP6.65□□□□□ -1.34
GPCPD1-202ENST00000418646 ANKRD30BQ9BXX2 1392 aa6.65□□□□□ -1.34
GPCPD1-202ENST00000418646 PPRC1Q5VV67 1664 aaKnown RBP6.65□□□□□ -1.34
GPCPD1-202ENST00000418646 PRDM15P57071 1507 aaPredicted RBP6.65□□□□□ -1.34
GPCPD1-202ENST00000418646 MROH1Q8NDA8 1641 aa6.65□□□□□ -1.35
GPCPD1-202ENST00000418646 INO80Q9ULG1 1556 aaPredicted RBP6.64□□□□□ -1.35
GPCPD1-202ENST00000418646 TTC37Q6PGP7 1564 aa6.64□□□□□ -1.35
GPCPD1-202ENST00000418646 RALGAPBQ86X10 1494 aa6.63□□□□□ -1.35
GPCPD1-202ENST00000418646 TROQ12816 1431 aaPredicted RBP6.63□□□□□ -1.35
GPCPD1-202ENST00000418646 UHRF1BP1LA0JNW5 1464 aa6.62□□□□□ -1.35
GPCPD1-202ENST00000418646 VIRMAQ69YN4 1812 aaKnown RBP6.62□□□□□ -1.35
GPCPD1-202ENST00000418646 MADDQ8WXG6 1647 aa6.62□□□□□ -1.35
GPCPD1-202ENST00000418646 DUOX2Q9NRD8 1548 aa6.61□□□□□ -1.35
GPCPD1-202ENST00000418646 ZCCHC11Q5TAX3 1644 aaKnown RBP6.61□□□□□ -1.35
GPCPD1-202ENST00000418646 CCER2I3L3R5 266 aa6.6□□□□□ -1.35
GPCPD1-202ENST00000418646 INSRP06213 1382 aa6.6□□□□□ -1.35
GPCPD1-202ENST00000418646 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.6□□□□□ -1.35
GPCPD1-202ENST00000418646 TDRD9Q8NDG6 1382 aaKnown RBP6.6□□□□□ -1.35
GPCPD1-202ENST00000418646 WDR7Q9Y4E6 1490 aa6.6□□□□□ -1.35
GPCPD1-202ENST00000418646 ERCC6Q03468 1493 aa6.59□□□□□ -1.35
GPCPD1-202ENST00000418646 ABCC1P33527 1531 aa6.59□□□□□ -1.35
GPCPD1-202ENST00000418646 DHX29Q7Z478 1369 aaKnown RBP6.59□□□□□ -1.35
GPCPD1-202ENST00000418646 GTF3C3Q9Y5Q9 886 aa6.59□□□□□ -1.35
GPCPD1-202ENST00000418646 USP32Q8NFA0 1604 aa6.59□□□□□ -1.36
GPCPD1-202ENST00000418646 CNTLNQ9NXG0 1405 aa6.58□□□□□ -1.36
GPCPD1-202ENST00000418646 ATP10BO94823 1461 aa6.58□□□□□ -1.36
GPCPD1-202ENST00000418646 PIK3C2BO00750 1634 aa6.57□□□□□ -1.36
GPCPD1-202ENST00000418646 ABCC2Q92887 1545 aa6.57□□□□□ -1.36
GPCPD1-202ENST00000418646 TET3O43151 1660 aa6.57□□□□□ -1.36
GPCPD1-202ENST00000418646 GPRASP1Q5JY77 1395 aa6.57□□□□□ -1.36
GPCPD1-202ENST00000418646 ABCA6Q8N139 1617 aa6.56□□□□□ -1.36
GPCPD1-202ENST00000418646 SYNMO15061 1565 aa6.56□□□□□ -1.36
GPCPD1-202ENST00000418646 PLA2R1Q13018 1463 aa6.56□□□□□ -1.36
GPCPD1-202ENST00000418646 PLB1Q6P1J6 1458 aa6.56□□□□□ -1.36
GPCPD1-202ENST00000418646 CENPBP07199 599 aaPredicted RBP6.56□□□□□ -1.36
GPCPD1-202ENST00000418646 RNF123Q5XPI4 1314 aa6.56□□□□□ -1.36
GPCPD1-202ENST00000418646 HNRNPUL2Q1KMD3 747 aaKnown RBP6.55□□□□□ -1.36
GPCPD1-202ENST00000418646 NRXN1Q9ULB1 1477 aa6.55□□□□□ -1.36
GPCPD1-202ENST00000418646 ZFYVE16Q7Z3T8 1539 aa6.55□□□□□ -1.36
GPCPD1-202ENST00000418646 FAM135AQ9P2D6 1515 aa6.55□□□□□ -1.36
GPCPD1-202ENST00000418646 TRPM2O94759 1503 aa6.55□□□□□ -1.36
GPCPD1-202ENST00000418646 LMTK2Q8IWU2 1503 aa6.55□□□□□ -1.36
GPCPD1-202ENST00000418646 KIAA1107Q9UPP5 1409 aa6.54□□□□□ -1.36
GPCPD1-202ENST00000418646 MROH2AA6NES4 1674 aa6.54□□□□□ -1.36
GPCPD1-202ENST00000418646 ZNF518AQ6AHZ1 1483 aa6.54□□□□□ -1.36
GPCPD1-202ENST00000418646 SUPT16HQ9Y5B9 1047 aaKnown RBP6.54□□□□□ -1.36
GPCPD1-202ENST00000418646 PPLO60437 1756 aa6.54□□□□□ -1.36
GPCPD1-202ENST00000418646 CCDC141Q6ZP82 1450 aa6.53□□□□□ -1.36
GPCPD1-202ENST00000418646 SHPRHQ149N8 1683 aa6.53□□□□□ -1.36
GPCPD1-202ENST00000418646 ERCC6L2Q5T890 1561 aa6.53□□□□□ -1.36
GPCPD1-202ENST00000418646 EHMT2Q96KQ7 1210 aa6.53□□□□□ -1.36
GPCPD1-202ENST00000418646 LRPPRCP42704 1394 aaKnown RBP6.52□□□□□ -1.37
GPCPD1-202ENST00000418646 KIF13AQ9H1H9 1805 aa6.52□□□□□ -1.37
GPCPD1-202ENST00000418646 MTUS2Q5JR59 1369 aa6.51□□□□□ -1.37
GPCPD1-202ENST00000418646 KIDINS220Q9ULH0 1771 aa6.51□□□□□ -1.37
GPCPD1-202ENST00000418646 CLTCL1P53675 1640 aa6.51□□□□□ -1.37
GPCPD1-202ENST00000418646 SETD1AO15047 1707 aaKnown RBP6.51□□□□□ -1.37
GPCPD1-202ENST00000418646 ANKRD26Q9UPS8 1709 aa6.51□□□□□ -1.37
GPCPD1-202ENST00000418646 CLTCQ00610 1675 aaKnown RBP6.51□□□□□ -1.37
GPCPD1-202ENST00000418646 ARID4BQ4LE39 1312 aaPredicted RBP6.51□□□□□ -1.37
GPCPD1-202ENST00000418646 WASHC2AQ641Q2 1341 aa6.51□□□□□ -1.37
GPCPD1-202ENST00000418646 SETBP1Q9Y6X0 1596 aa6.51□□□□□ -1.37
GPCPD1-202ENST00000418646 PRG4Q92954 1404 aaPredicted RBP6.5□□□□□ -1.37
GPCPD1-202ENST00000418646 PTPRTO14522 1441 aa6.5□□□□□ -1.37
GPCPD1-202ENST00000418646 ERBINQ96RT1 1412 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms