RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 TMF1P82094 1093 aa22.38■■□□□ 1.17
SYNGAP1-202ENST00000418600 PRG4Q92954 1404 aaPredicted RBP22.38■■□□□ 1.17
SYNGAP1-202ENST00000418600 U2SURPO15042 1029 aaKnown RBP22.35■■□□□ 1.17
SYNGAP1-202ENST00000418600 FOXD1Q16676 465 aa22.35■■□□□ 1.17
SYNGAP1-202ENST00000418600 GOLGA2Q08379 1002 aa22.35■■□□□ 1.17
SYNGAP1-202ENST00000418600 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
SYNGAP1-202ENST00000418600 ATF3P18847 181 aa22.34■■□□□ 1.17
SYNGAP1-202ENST00000418600 MRS2Q9HD23 443 aa22.31■■□□□ 1.16
SYNGAP1-202ENST00000418600 MSH5O43196 834 aa22.29■■□□□ 1.16
SYNGAP1-202ENST00000418600 HIRIP3Q9BW71 556 aaPredicted RBP22.29■■□□□ 1.16
SYNGAP1-202ENST00000418600 NUTM2FA1L443 756 aa22.28■■□□□ 1.16
SYNGAP1-202ENST00000418600 RTF1Q92541 710 aaKnown RBP22.28■■□□□ 1.16
SYNGAP1-202ENST00000418600 ZNF330Q9Y3S2 320 aaPredicted RBP22.28■■□□□ 1.16
SYNGAP1-202ENST00000418600 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.27■■□□□ 1.16
SYNGAP1-202ENST00000418600 POGZQ7Z3K3 1410 aa22.27■■□□□ 1.15
SYNGAP1-202ENST00000418600 EIF3AQ14152 1382 aaKnown RBP22.26■■□□□ 1.15
SYNGAP1-202ENST00000418600 SNAPC4Q5SXM2 1469 aa22.26■■□□□ 1.15
SYNGAP1-202ENST00000418600 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
SYNGAP1-202ENST00000418600 HNRNPUQ00839 825 aaKnown RBP eCLIP22.25■■□□□ 1.15
SYNGAP1-202ENST00000418600 MORC1Q86VD1 984 aa22.23■■□□□ 1.15
SYNGAP1-202ENST00000418600 NEUROD2Q15784 382 aa22.21■■□□□ 1.15
SYNGAP1-202ENST00000418600 SF3B2Q13435 895 aaKnown RBP22.19■■□□□ 1.14
SYNGAP1-202ENST00000418600 CC2D1BQ5T0F9 858 aaKnown RBP22.19■■□□□ 1.14
SYNGAP1-202ENST00000418600 HSP90AA1P07900 732 aaKnown RBP22.18■■□□□ 1.14
SYNGAP1-202ENST00000418600 PIP4K2BP78356 416 aa22.17■■□□□ 1.14
SYNGAP1-202ENST00000418600 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
SYNGAP1-202ENST00000418600 G3V3G9 751 aa22.16■■□□□ 1.14
SYNGAP1-202ENST00000418600 DCAF8Q5TAQ9 597 aa22.16■■□□□ 1.14
SYNGAP1-202ENST00000418600 ANP32BQ92688 251 aaKnown RBP22.16■■□□□ 1.14
SYNGAP1-202ENST00000418600 VGFO15240 615 aaPredicted RBP22.16■■□□□ 1.14
SYNGAP1-202ENST00000418600 KLHL34Q8N239 644 aa22.16■■□□□ 1.14
SYNGAP1-202ENST00000418600 UPF2Q9HAU5 1272 aaKnown RBP22.16■■□□□ 1.14
SYNGAP1-202ENST00000418600 UACAQ9BZF9 1416 aa22.15■■□□□ 1.14
SYNGAP1-202ENST00000418600 LAMC3Q9Y6N6 1575 aa22.15■■□□□ 1.14
SYNGAP1-202ENST00000418600 VPS8Q8N3P4 1428 aa22.15■■□□□ 1.14
SYNGAP1-202ENST00000418600 TERF2IPQ9NYB0 399 aa22.15■■□□□ 1.14
SYNGAP1-202ENST00000418600 AMPHP49418 695 aa22.15■■□□□ 1.14
SYNGAP1-202ENST00000418600 ANP32AP39687 249 aaKnown RBP22.14■■□□□ 1.14
SYNGAP1-202ENST00000418600 OS9Q13438 667 aaPredicted RBP22.14■■□□□ 1.13
SYNGAP1-202ENST00000418600 CFTRP13569 1480 aa22.13■■□□□ 1.13
SYNGAP1-202ENST00000418600 ARHGAP5Q13017 1502 aa22.13■■□□□ 1.13
SYNGAP1-202ENST00000418600 PSME1Q06323 249 aa22.13■■□□□ 1.13
SYNGAP1-202ENST00000418600 ROCK2O75116 1388 aaKnown RBP22.13■■□□□ 1.13
SYNGAP1-202ENST00000418600 LTV1Q96GA3 475 aaPredicted RBP22.1■■□□□ 1.13
SYNGAP1-202ENST00000418600 TOPBP1Q92547 1522 aa22.1■■□□□ 1.13
SYNGAP1-202ENST00000418600 PROSER2Q86WR7 435 aaPredicted RBP22.08■■□□□ 1.13
SYNGAP1-202ENST00000418600 FTSJ3Q8IY81 847 aaKnown RBP22.06■■□□□ 1.12
SYNGAP1-202ENST00000418600 SIN3AQ96ST3 1273 aa22.06■■□□□ 1.12
SYNGAP1-202ENST00000418600 SETD5Q9C0A6 1442 aa22.06■■□□□ 1.12
SYNGAP1-202ENST00000418600 KANK4Q5T7N3 995 aaPredicted RBP22.06■■□□□ 1.12
SYNGAP1-202ENST00000418600 MPHOSPH9Q99550 1183 aa22.06■■□□□ 1.12
SYNGAP1-202ENST00000418600 IGF1RP08069 1367 aa22.05■■□□□ 1.12
SYNGAP1-202ENST00000418600 THEMISQ8N1K5 641 aaPredicted RBP22.04■■□□□ 1.12
SYNGAP1-202ENST00000418600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.03■■□□□ 1.12
SYNGAP1-202ENST00000418600 GTF2E1P29083 439 aaPredicted RBP22.02■■□□□ 1.12
SYNGAP1-202ENST00000418600 TRAK1Q9UPV9 953 aa22.02■■□□□ 1.12
SYNGAP1-202ENST00000418600 NUTM2BA6NNL0 878 aaPredicted RBP22.01■■□□□ 1.11
SYNGAP1-202ENST00000418600 NUTM2EB1AL46 878 aaPredicted RBP22.01■■□□□ 1.11
SYNGAP1-202ENST00000418600 NUTM2AQ8IVF1 878 aaPredicted RBP22.01■■□□□ 1.11
SYNGAP1-202ENST00000418600 DNMBPQ6XZF7 1577 aa22■■□□□ 1.11
SYNGAP1-202ENST00000418600 TXNDC2Q86VQ3 553 aa21.98■■□□□ 1.11
SYNGAP1-202ENST00000418600 SYNJ1O43426 1573 aa21.98■■□□□ 1.11
SYNGAP1-202ENST00000418600 ANKLE2Q86XL3 938 aa21.97■■□□□ 1.11
SYNGAP1-202ENST00000418600 CCDC144AA2RUR9 1427 aa21.97■■□□□ 1.11
SYNGAP1-202ENST00000418600 ISY1Q9ULR0 285 aaKnown RBP21.97■■□□□ 1.11
SYNGAP1-202ENST00000418600 SYTL4Q96C24 671 aaPredicted RBP21.96■■□□□ 1.11
SYNGAP1-202ENST00000418600 DMRT2Q9Y5R5 561 aa21.95■■□□□ 1.1
SYNGAP1-202ENST00000418600 POLA1P09884 1462 aaPredicted RBP21.93■■□□□ 1.1
SYNGAP1-202ENST00000418600 C1orf141Q5JVX7 400 aa21.92■■□□□ 1.1
SYNGAP1-202ENST00000418600 CHMP4BQ9H444 224 aaKnown RBP21.92■■□□□ 1.1
SYNGAP1-202ENST00000418600 CHMP4AQ9BY43 222 aa21.92■■□□□ 1.1
SYNGAP1-202ENST00000418600 CDK11BP21127 795 aaKnown RBP21.92■■□□□ 1.1
SYNGAP1-202ENST00000418600 CASC1Q6TDU7 716 aa21.92■■□□□ 1.1
SYNGAP1-202ENST00000418600 TULP1O00294 542 aaPredicted RBP21.91■■□□□ 1.1
SYNGAP1-202ENST00000418600 MINK1Q8N4C8 1332 aaPredicted RBP21.9■■□□□ 1.1
SYNGAP1-202ENST00000418600 COG3Q96JB2 828 aa21.9■■□□□ 1.1
SYNGAP1-202ENST00000418600 CALD1Q05682 793 aaKnown RBP21.89■■□□□ 1.09
SYNGAP1-202ENST00000418600 BICRAQ9NZM4 1560 aa21.88■■□□□ 1.09
SYNGAP1-202ENST00000418600 RAPGEF3O95398 923 aa21.87■■□□□ 1.09
SYNGAP1-202ENST00000418600 TAF7LQ5H9L4 462 aa21.87■■□□□ 1.09
SYNGAP1-202ENST00000418600 AFAP1Q8N556 730 aa21.87■■□□□ 1.09
SYNGAP1-202ENST00000418600 GTF3C3Q9Y5Q9 886 aa21.87■■□□□ 1.09
SYNGAP1-202ENST00000418600 EVC2Q86UK5 1308 aa21.86■■□□□ 1.09
SYNGAP1-202ENST00000418600 ESCO1Q5FWF5 840 aa21.85■■□□□ 1.09
SYNGAP1-202ENST00000418600 U2AF1L5P0DN76 240 aaPredicted RBP21.84■■□□□ 1.09
SYNGAP1-202ENST00000418600 U2AF1Q01081 240 aaKnown RBP eCLIP21.84■■□□□ 1.09
SYNGAP1-202ENST00000418600 GPRASP1Q5JY77 1395 aa21.83■■□□□ 1.09
SYNGAP1-202ENST00000418600 MYOM3Q5VTT5 1437 aa21.82■■□□□ 1.08
SYNGAP1-202ENST00000418600 CHMP3Q9Y3E7 222 aa21.82■■□□□ 1.08
SYNGAP1-202ENST00000418600 CD109Q6YHK3 1445 aa21.82■■□□□ 1.08
SYNGAP1-202ENST00000418600 MS4A1P11836 297 aa21.81■■□□□ 1.08
SYNGAP1-202ENST00000418600 SENP3-EIF4A1A0A087X0R7 540 aa21.81■■□□□ 1.08
SYNGAP1-202ENST00000418600 MAGI1Q96QZ7 1491 aaPredicted RBP21.8■■□□□ 1.08
SYNGAP1-202ENST00000418600 FRAT1Q92837 279 aaPredicted RBP21.8■■□□□ 1.08
SYNGAP1-202ENST00000418600 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.8■■□□□ 1.08
SYNGAP1-202ENST00000418600 PLEKHH2Q8IVE3 1493 aa21.8■■□□□ 1.08
SYNGAP1-202ENST00000418600 KIF15Q9NS87 1388 aa21.79■■□□□ 1.08
SYNGAP1-202ENST00000418600 TTC5Q8N0Z6 440 aa21.79■■□□□ 1.08
SYNGAP1-202ENST00000418600 DHX57Q6P158 1386 aaKnown RBP21.78■■□□□ 1.08
SYNGAP1-202ENST00000418600 KTN1Q86UP2 1357 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms