RNA–Protein interactions for RNA: ENST00000417982.6

PCTP-203, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 2

Gene PCTP, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-203ENST00000417982 GPATCH8Q9UKJ3 1502 aaKnown RBP29.23■■■□□ 2.27
PCTP-203ENST00000417982 CHD1O14646 1710 aa29.23■■■□□ 2.27
PCTP-203ENST00000417982 ZNF644Q9H582 1327 aaPredicted RBP29.21■■■□□ 2.27
PCTP-203ENST00000417982 CAMSAP2Q08AD1 1489 aa29.2■■■□□ 2.26
PCTP-203ENST00000417982 ATP10BO94823 1461 aa29.19■■■□□ 2.26
PCTP-203ENST00000417982 TONSLQ96HA7 1378 aa29.19■■■□□ 2.26
PCTP-203ENST00000417982 KDM5BQ9UGL1 1544 aa29.18■■■□□ 2.26
PCTP-203ENST00000417982 SHROOM2Q13796 1616 aa29.15■■■□□ 2.26
PCTP-203ENST00000417982 ABCC10Q5T3U5 1492 aa29.14■■■□□ 2.26
PCTP-203ENST00000417982 CROCC2H7BZ55 1655 aa29.12■■■□□ 2.25
PCTP-203ENST00000417982 CFDP1Q9UEE9 299 aaPredicted RBP29.12■■■□□ 2.25
PCTP-203ENST00000417982 CDC42BPAQ5VT25 1732 aa29.1■■■□□ 2.25
PCTP-203ENST00000417982 ADGBQ8N7X0 1667 aa29.1■■■□□ 2.25
PCTP-203ENST00000417982 PTPRGP23470 1445 aa29.09■■■□□ 2.25
PCTP-203ENST00000417982 ADGRL2O95490 1459 aa29.08■■■□□ 2.25
PCTP-203ENST00000417982 YTHDC1Q96MU7 727 aaKnown RBP29.08■■■□□ 2.25
PCTP-203ENST00000417982 TRIM52Q96A61 297 aa29.07■■■□□ 2.24
PCTP-203ENST00000417982 MPHOSPH9Q99550 1183 aa29.06■■■□□ 2.24
PCTP-203ENST00000417982 PLEKHD1A6NEE1 506 aa29.06■■■□□ 2.24
PCTP-203ENST00000417982 NCOA1Q15788 1441 aa29.04■■■□□ 2.24
PCTP-203ENST00000417982 SHANK2Q9UPX8 1470 aa28.97■■■□□ 2.23
PCTP-203ENST00000417982 ANKRD30BQ9BXX2 1392 aa28.96■■■□□ 2.23
PCTP-203ENST00000417982 GTF3C3Q9Y5Q9 886 aa28.94■■■□□ 2.22
PCTP-203ENST00000417982 PZPP20742 1482 aa28.93■■■□□ 2.22
PCTP-203ENST00000417982 ZNF777Q9ULD5 760 aaPredicted RBP28.93■■■□□ 2.22
PCTP-203ENST00000417982 ERCC6L2Q5T890 1561 aa28.91■■■□□ 2.22
PCTP-203ENST00000417982 RPRD2Q5VT52 1461 aaKnown RBP28.9■■■□□ 2.22
PCTP-203ENST00000417982 ANKRD30AQ9BXX3 1397 aa28.9■■■□□ 2.22
PCTP-203ENST00000417982 CLASP1Q7Z460 1538 aa28.89■■■□□ 2.22
PCTP-203ENST00000417982 ARHGEF5Q12774 1597 aa28.89■■■□□ 2.21
PCTP-203ENST00000417982 PREX2Q70Z35 1606 aa28.88■■■□□ 2.21
PCTP-203ENST00000417982 ABCC2Q92887 1545 aa28.87■■■□□ 2.21
PCTP-203ENST00000417982 FOXD1Q16676 465 aa28.87■■■□□ 2.21
PCTP-203ENST00000417982 DDX10Q13206 875 aaKnown RBP28.86■■■□□ 2.21
PCTP-203ENST00000417982 C9orf84Q5VXU9 1444 aa28.86■■■□□ 2.21
PCTP-203ENST00000417982 CDC42BPBQ9Y5S2 1711 aa28.85■■■□□ 2.21
PCTP-203ENST00000417982 HIRIP3Q9BW71 556 aaPredicted RBP28.85■■■□□ 2.21
PCTP-203ENST00000417982 TEX14Q8IWB6 1497 aa28.84■■■□□ 2.21
PCTP-203ENST00000417982 SLC4A1APQ9BWU0 796 aaKnown RBP28.83■■■□□ 2.21
PCTP-203ENST00000417982 MBD5Q9P267 1494 aa28.83■■■□□ 2.21
PCTP-203ENST00000417982 ANKRD50Q9ULJ7 1429 aa28.82■■■□□ 2.2
PCTP-203ENST00000417982 SAMD9LQ8IVG5 1584 aa28.82■■■□□ 2.2
PCTP-203ENST00000417982 L3MBTL2Q969R5 705 aa28.79■■■□□ 2.2
PCTP-203ENST00000417982 TTC37Q6PGP7 1564 aa28.77■■■□□ 2.2
PCTP-203ENST00000417982 KIAA1107Q9UPP5 1409 aa28.76■■■□□ 2.19
PCTP-203ENST00000417982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.75■■■□□ 2.19
PCTP-203ENST00000417982 KDM5DQ9BY66 1539 aa28.75■■■□□ 2.19
PCTP-203ENST00000417982 CCDC141Q6ZP82 1450 aa28.74■■■□□ 2.19
PCTP-203ENST00000417982 UHRF1BP1LA0JNW5 1464 aa28.72■■■□□ 2.19
PCTP-203ENST00000417982 HNRNPMP52272 730 aaKnown RBP eCLIP28.69■■■□□ 2.18
PCTP-203ENST00000417982 TSPY4P0CV99 314 aa28.69■■■□□ 2.18
PCTP-203ENST00000417982 TSPY10P0CW01 314 aa28.69■■■□□ 2.18
PCTP-203ENST00000417982 KIF15Q9NS87 1388 aa28.68■■■□□ 2.18
PCTP-203ENST00000417982 MAST1Q9Y2H9 1570 aa28.67■■■□□ 2.18
PCTP-203ENST00000417982 HSPA5P11021 654 aaKnown RBP28.66■■■□□ 2.18
PCTP-203ENST00000417982 MYO5CQ9NQX4 1742 aa28.66■■■□□ 2.18
PCTP-203ENST00000417982 ZCCHC11Q5TAX3 1644 aaKnown RBP28.66■■■□□ 2.18
PCTP-203ENST00000417982 KCNH8Q96L42 1107 aa28.66■■■□□ 2.18
PCTP-203ENST00000417982 RSPH4AQ5TD94 716 aa28.65■■■□□ 2.18
PCTP-203ENST00000417982 SYCP2Q9BX26 1530 aa28.65■■■□□ 2.18
PCTP-203ENST00000417982 ARHGAP5Q13017 1502 aa28.65■■■□□ 2.18
PCTP-203ENST00000417982 NBPF8Q3BBV2 869 aa28.63■■■□□ 2.17
PCTP-203ENST00000417982 PKD2Q13563 968 aa28.62■■■□□ 2.17
PCTP-203ENST00000417982 EIF4G2P78344 907 aaKnown RBP eCLIP28.62■■■□□ 2.17
PCTP-203ENST00000417982 NUP155O75694 1391 aa28.61■■■□□ 2.17
PCTP-203ENST00000417982 PLEKHH2Q8IVE3 1493 aa28.59■■■□□ 2.17
PCTP-203ENST00000417982 CCER2I3L3R5 266 aa28.59■■■□□ 2.17
PCTP-203ENST00000417982 WASHC2AQ641Q2 1341 aa28.57■■■□□ 2.16
PCTP-203ENST00000417982 ANP32CO43423 234 aa28.56■■■□□ 2.16
PCTP-203ENST00000417982 SPATA31E1Q6ZUB1 1445 aa28.55■■■□□ 2.16
PCTP-203ENST00000417982 PLXNC1O60486 1568 aa28.55■■■□□ 2.16
PCTP-203ENST00000417982 PLCH2O75038 1416 aa28.53■■■□□ 2.16
PCTP-203ENST00000417982 UNC13BO14795 1591 aa28.51■■■□□ 2.15
PCTP-203ENST00000417982 ARHGEF12Q9NZN5 1544 aa28.5■■■□□ 2.15
PCTP-203ENST00000417982 FAM135AQ9P2D6 1515 aa28.49■■■□□ 2.15
PCTP-203ENST00000417982 POLR1AO95602 1720 aaPredicted RBP28.47■■■□□ 2.15
PCTP-203ENST00000417982 UHRF1BP1Q6BDS2 1440 aa28.46■■■□□ 2.15
PCTP-203ENST00000417982 ABCC1P33527 1531 aa28.45■■■□□ 2.15
PCTP-203ENST00000417982 CCDC7Q96M83 1385 aa28.44■■■□□ 2.14
PCTP-203ENST00000417982 ARAP3Q8WWN8 1544 aa28.44■■■□□ 2.14
PCTP-203ENST00000417982 CNTLNQ9NXG0 1405 aa28.43■■■□□ 2.14
PCTP-203ENST00000417982 C11orf95C9JLR9 678 aaPredicted RBP28.42■■■□□ 2.14
PCTP-203ENST00000417982 DUOX2Q9NRD8 1548 aa28.4■■■□□ 2.14
PCTP-203ENST00000417982 IQGAP3Q86VI3 1631 aa28.38■■■□□ 2.13
PCTP-203ENST00000417982 EFCAB2Q5VUJ9 269 aa28.38■■■□□ 2.13
PCTP-203ENST00000417982 MAGI2Q86UL8 1455 aa28.38■■■□□ 2.13
PCTP-203ENST00000417982 RALGAPBQ86X10 1494 aa28.37■■■□□ 2.13
PCTP-203ENST00000417982 ERBINQ96RT1 1412 aa28.35■■■□□ 2.13
PCTP-203ENST00000417982 KDM5CP41229 1560 aa28.34■■■□□ 2.13
PCTP-203ENST00000417982 WDR7Q9Y4E6 1490 aa28.34■■■□□ 2.13
PCTP-203ENST00000417982 TRAPPC8Q9Y2L5 1435 aa28.33■■■□□ 2.13
PCTP-203ENST00000417982 KIF7Q2M1P5 1343 aa28.31■■■□□ 2.12
PCTP-203ENST00000417982 USP47Q96K76 1375 aa28.31■■■□□ 2.12
PCTP-203ENST00000417982 PLA2R1Q13018 1463 aa28.3■■■□□ 2.12
PCTP-203ENST00000417982 BCORL1Q5H9F3 1711 aa28.28■■■□□ 2.12
PCTP-203ENST00000417982 ABCA9Q8IUA7 1624 aa28.28■■■□□ 2.12
PCTP-203ENST00000417982 RTEL1-TNFRSF6BF6WH68 1400 aa28.26■■■□□ 2.11
PCTP-203ENST00000417982 ZFYVE16Q7Z3T8 1539 aa28.25■■■□□ 2.11
PCTP-203ENST00000417982 CCDC144AA2RUR9 1427 aa28.24■■■□□ 2.11
PCTP-203ENST00000417982 ATP10AO60312 1499 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms