RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 DAPK1P53355 1430 aa14.09□□□□□ -0.15
LINC00494-201ENST00000416742 TROQ12816 1431 aaPredicted RBP14.09□□□□□ -0.15
LINC00494-201ENST00000416742 ABCC5O15440 1437 aa14.09□□□□□ -0.15
LINC00494-201ENST00000416742 NUP160Q12769 1436 aa14.08□□□□□ -0.16
LINC00494-201ENST00000416742 SLC4A1APQ9BWU0 796 aaKnown RBP14.07□□□□□ -0.16
LINC00494-201ENST00000416742 AKNAQ7Z591 1439 aa14.07□□□□□ -0.16
LINC00494-201ENST00000416742 GCC2Q8IWJ2 1684 aa14.06□□□□□ -0.16
LINC00494-201ENST00000416742 ANP32CO43423 234 aa14.05□□□□□ -0.16
LINC00494-201ENST00000416742 L3MBTL2Q969R5 705 aa14.04□□□□□ -0.16
LINC00494-201ENST00000416742 DENND4BO75064 1496 aaPredicted RBP14.04□□□□□ -0.16
LINC00494-201ENST00000416742 ROCK1Q13464 1354 aa14.03□□□□□ -0.16
LINC00494-201ENST00000416742 GPATCH8Q9UKJ3 1502 aaKnown RBP14.02□□□□□ -0.16
LINC00494-201ENST00000416742 CAMSAP2Q08AD1 1489 aa14.01□□□□□ -0.17
LINC00494-201ENST00000416742 DNMT1P26358 1616 aaKnown RBP14.01□□□□□ -0.17
LINC00494-201ENST00000416742 HSPA5P11021 654 aaKnown RBP14.01□□□□□ -0.17
LINC00494-201ENST00000416742 KIF14Q15058 1648 aa14.01□□□□□ -0.17
LINC00494-201ENST00000416742 PTPRGP23470 1445 aa14□□□□□ -0.17
LINC00494-201ENST00000416742 ATP10BO94823 1461 aa13.99□□□□□ -0.17
LINC00494-201ENST00000416742 EIF4G2P78344 907 aaKnown RBP eCLIP13.98□□□□□ -0.17
LINC00494-201ENST00000416742 ANKRD30BQ9BXX2 1392 aa13.97□□□□□ -0.17
LINC00494-201ENST00000416742 KDM5BQ9UGL1 1544 aa13.97□□□□□ -0.17
LINC00494-201ENST00000416742 TSPY4P0CV99 314 aa13.97□□□□□ -0.17
LINC00494-201ENST00000416742 TSPY10P0CW01 314 aa13.97□□□□□ -0.17
LINC00494-201ENST00000416742 PELP1Q8IZL8 1130 aaKnown RBP13.97□□□□□ -0.17
LINC00494-201ENST00000416742 NCOA1Q15788 1441 aa13.96□□□□□ -0.17
LINC00494-201ENST00000416742 HNRNPMP52272 730 aaKnown RBP eCLIP13.96□□□□□ -0.17
LINC00494-201ENST00000416742 ANKRD30AQ9BXX3 1397 aa13.96□□□□□ -0.18
LINC00494-201ENST00000416742 ITSN2Q9NZM3 1697 aa13.95□□□□□ -0.18
LINC00494-201ENST00000416742 PKD2Q13563 968 aa13.94□□□□□ -0.18
LINC00494-201ENST00000416742 NBPF8Q3BBV2 869 aa13.94□□□□□ -0.18
LINC00494-201ENST00000416742 ABCA8O94911 1581 aa13.94□□□□□ -0.18
LINC00494-201ENST00000416742 ZNF326Q5BKZ1 582 aaKnown RBP13.94□□□□□ -0.18
LINC00494-201ENST00000416742 CCER2I3L3R5 266 aa13.93□□□□□ -0.18
LINC00494-201ENST00000416742 WASHC2AQ641Q2 1341 aa13.92□□□□□ -0.18
LINC00494-201ENST00000416742 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
LINC00494-201ENST00000416742 ADCY10Q96PN6 1610 aa13.9□□□□□ -0.18
LINC00494-201ENST00000416742 ANKRD50Q9ULJ7 1429 aa13.9□□□□□ -0.18
LINC00494-201ENST00000416742 NUP155O75694 1391 aa13.9□□□□□ -0.19
LINC00494-201ENST00000416742 ABCC10Q5T3U5 1492 aa13.89□□□□□ -0.19
LINC00494-201ENST00000416742 SUPT16HQ9Y5B9 1047 aaKnown RBP13.89□□□□□ -0.19
LINC00494-201ENST00000416742 PZPP20742 1482 aa13.89□□□□□ -0.19
LINC00494-201ENST00000416742 C9orf84Q5VXU9 1444 aa13.88□□□□□ -0.19
LINC00494-201ENST00000416742 C11orf95C9JLR9 678 aaPredicted RBP13.88□□□□□ -0.19
LINC00494-201ENST00000416742 CDC42BPAQ5VT25 1732 aa13.87□□□□□ -0.19
LINC00494-201ENST00000416742 CHD1O14646 1710 aa13.87□□□□□ -0.19
LINC00494-201ENST00000416742 ADGRL2O95490 1459 aa13.87□□□□□ -0.19
LINC00494-201ENST00000416742 POLR3GLQ9BT43 218 aa13.86□□□□□ -0.19
LINC00494-201ENST00000416742 KIAA1107Q9UPP5 1409 aa13.86□□□□□ -0.19
LINC00494-201ENST00000416742 ADGBQ8N7X0 1667 aa13.85□□□□□ -0.19
LINC00494-201ENST00000416742 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
LINC00494-201ENST00000416742 TEX14Q8IWB6 1497 aa13.84□□□□□ -0.19
LINC00494-201ENST00000416742 CNGB1Q14028 1251 aaPredicted RBP13.83□□□□□ -0.2
LINC00494-201ENST00000416742 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
LINC00494-201ENST00000416742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC00494-201ENST00000416742 CCDC7Q96M83 1385 aa13.82□□□□□ -0.2
LINC00494-201ENST00000416742 BCANQ96GW7 911 aa13.82□□□□□ -0.2
LINC00494-201ENST00000416742 CROCC2H7BZ55 1655 aa13.82□□□□□ -0.2
LINC00494-201ENST00000416742 ERCC6L2Q5T890 1561 aa13.81□□□□□ -0.2
LINC00494-201ENST00000416742 HNRNPUQ00839 825 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC00494-201ENST00000416742 FKBP8Q14318 412 aa13.8□□□□□ -0.2
LINC00494-201ENST00000416742 RSPH4AQ5TD94 716 aa13.79□□□□□ -0.2
LINC00494-201ENST00000416742 SHANK2Q9UPX8 1470 aa13.79□□□□□ -0.2
LINC00494-201ENST00000416742 KIF7Q2M1P5 1343 aa13.79□□□□□ -0.2
LINC00494-201ENST00000416742 MBD5Q9P267 1494 aa13.79□□□□□ -0.2
LINC00494-201ENST00000416742 CNTLNQ9NXG0 1405 aa13.78□□□□□ -0.2
LINC00494-201ENST00000416742 CCDC141Q6ZP82 1450 aa13.78□□□□□ -0.2
LINC00494-201ENST00000416742 ARHGAP5Q13017 1502 aa13.77□□□□□ -0.2
LINC00494-201ENST00000416742 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
LINC00494-201ENST00000416742 CCDC184Q52MB2 194 aa13.77□□□□□ -0.21
LINC00494-201ENST00000416742 NEFLP07196 543 aa13.76□□□□□ -0.21
LINC00494-201ENST00000416742 SAMD9LQ8IVG5 1584 aa13.76□□□□□ -0.21
LINC00494-201ENST00000416742 PRKRIP1Q9H875 184 aaPredicted RBP13.75□□□□□ -0.21
LINC00494-201ENST00000416742 CDC42BPBQ9Y5S2 1711 aa13.75□□□□□ -0.21
LINC00494-201ENST00000416742 FAM9BQ8IZU0 186 aa13.75□□□□□ -0.21
LINC00494-201ENST00000416742 CARD11Q9BXL7 1154 aa13.75□□□□□ -0.21
LINC00494-201ENST00000416742 RGL3Q3MIN7 710 aa13.74□□□□□ -0.21
LINC00494-201ENST00000416742 USP47Q96K76 1375 aa13.74□□□□□ -0.21
LINC00494-201ENST00000416742 SPATA31E1Q6ZUB1 1445 aa13.74□□□□□ -0.21
LINC00494-201ENST00000416742 MRS2Q9HD23 443 aa13.74□□□□□ -0.21
LINC00494-201ENST00000416742 ARHGEF5Q12774 1597 aa13.74□□□□□ -0.21
LINC00494-201ENST00000416742 SYCP2Q9BX26 1530 aa13.74□□□□□ -0.21
LINC00494-201ENST00000416742 SHROOM2Q13796 1616 aa13.73□□□□□ -0.21
LINC00494-201ENST00000416742 ABCC2Q92887 1545 aa13.73□□□□□ -0.21
LINC00494-201ENST00000416742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC00494-201ENST00000416742 PREX2Q70Z35 1606 aa13.72□□□□□ -0.21
LINC00494-201ENST00000416742 TTC37Q6PGP7 1564 aa13.72□□□□□ -0.21
LINC00494-201ENST00000416742 EFCAB2Q5VUJ9 269 aa13.72□□□□□ -0.21
LINC00494-201ENST00000416742 ST20-MTHFSA0A0A6YYL1 179 aa13.68□□□□□ -0.22
LINC00494-201ENST00000416742 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
LINC00494-201ENST00000416742 PLEKHH2Q8IVE3 1493 aa13.68□□□□□ -0.22
LINC00494-201ENST00000416742 FAM135AQ9P2D6 1515 aa13.67□□□□□ -0.22
LINC00494-201ENST00000416742 KDM5DQ9BY66 1539 aa13.67□□□□□ -0.22
LINC00494-201ENST00000416742 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
LINC00494-201ENST00000416742 PLCH2O75038 1416 aa13.66□□□□□ -0.22
LINC00494-201ENST00000416742 AFAP1Q8N556 730 aa13.65□□□□□ -0.22
LINC00494-201ENST00000416742 MYO5CQ9NQX4 1742 aa13.65□□□□□ -0.22
LINC00494-201ENST00000416742 ARHGEF12Q9NZN5 1544 aa13.65□□□□□ -0.22
LINC00494-201ENST00000416742 ROCK2O75116 1388 aaKnown RBP13.64□□□□□ -0.23
LINC00494-201ENST00000416742 UHRF1BP1Q6BDS2 1440 aa13.64□□□□□ -0.23
LINC00494-201ENST00000416742 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms