RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
CHEK2-210ENST00000416671 MSH5O43196 834 aa19.37■□□□□ 0.69
CHEK2-210ENST00000416671 UACAQ9BZF9 1416 aa19.36■□□□□ 0.69
CHEK2-210ENST00000416671 TCOF1Q13428 1488 aaKnown RBP19.36■□□□□ 0.69
CHEK2-210ENST00000416671 HIRIP3Q9BW71 556 aaPredicted RBP19.36■□□□□ 0.69
CHEK2-210ENST00000416671 ZNF644Q9H582 1327 aaPredicted RBP19.35■□□□□ 0.69
CHEK2-210ENST00000416671 ATP10BO94823 1461 aa19.35■□□□□ 0.69
CHEK2-210ENST00000416671 CDK11AQ9UQ88 783 aaPredicted RBP19.34■□□□□ 0.69
CHEK2-210ENST00000416671 TRIM52Q96A61 297 aa19.32■□□□□ 0.68
CHEK2-210ENST00000416671 PPP1R15AO75807 674 aaPredicted RBP19.32■□□□□ 0.68
CHEK2-210ENST00000416671 CCER2I3L3R5 266 aa19.31■□□□□ 0.68
CHEK2-210ENST00000416671 MIA2Q96PC5 1412 aa19.31■□□□□ 0.68
CHEK2-210ENST00000416671 KDM6BO15054 1643 aa19.3■□□□□ 0.68
CHEK2-210ENST00000416671 FANCIQ9NVI1 1328 aa19.3■□□□□ 0.68
CHEK2-210ENST00000416671 TROQ12816 1431 aaPredicted RBP19.3■□□□□ 0.68
CHEK2-210ENST00000416671 TONSLQ96HA7 1378 aa19.29■□□□□ 0.68
CHEK2-210ENST00000416671 KIF14Q15058 1648 aa19.29■□□□□ 0.68
CHEK2-210ENST00000416671 PLEKHD1A6NEE1 506 aa19.28■□□□□ 0.68
CHEK2-210ENST00000416671 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
CHEK2-210ENST00000416671 ERICH6Q7L0X2 663 aa19.27■□□□□ 0.68
CHEK2-210ENST00000416671 TIMELESSQ9UNS1 1208 aa19.27■□□□□ 0.68
CHEK2-210ENST00000416671 ANP32CO43423 234 aa19.25■□□□□ 0.67
CHEK2-210ENST00000416671 FOXD1Q16676 465 aa19.24■□□□□ 0.67
CHEK2-210ENST00000416671 GCC2Q8IWJ2 1684 aa19.24■□□□□ 0.67
CHEK2-210ENST00000416671 ZNF777Q9ULD5 760 aaPredicted RBP19.24■□□□□ 0.67
CHEK2-210ENST00000416671 DAPK1P53355 1430 aa19.23■□□□□ 0.67
CHEK2-210ENST00000416671 DENND4BO75064 1496 aaPredicted RBP19.22■□□□□ 0.67
CHEK2-210ENST00000416671 ABCC5O15440 1437 aa19.21■□□□□ 0.67
CHEK2-210ENST00000416671 CFDP1Q9UEE9 299 aaPredicted RBP19.21■□□□□ 0.67
CHEK2-210ENST00000416671 ABCC2Q92887 1545 aa19.2■□□□□ 0.66
CHEK2-210ENST00000416671 MPHOSPH9Q99550 1183 aa19.19■□□□□ 0.66
CHEK2-210ENST00000416671 MYT1LQ9UL68 1186 aa19.19■□□□□ 0.66
CHEK2-210ENST00000416671 GPATCH8Q9UKJ3 1502 aaKnown RBP19.18■□□□□ 0.66
CHEK2-210ENST00000416671 AKNAQ7Z591 1439 aa19.18■□□□□ 0.66
CHEK2-210ENST00000416671 DNMT1P26358 1616 aaKnown RBP19.16■□□□□ 0.66
CHEK2-210ENST00000416671 ADCY10Q96PN6 1610 aa19.16■□□□□ 0.66
CHEK2-210ENST00000416671 CAMSAP2Q08AD1 1489 aa19.14■□□□□ 0.66
CHEK2-210ENST00000416671 ABCC10Q5T3U5 1492 aa19.14■□□□□ 0.65
CHEK2-210ENST00000416671 KDM5BQ9UGL1 1544 aa19.12■□□□□ 0.65
CHEK2-210ENST00000416671 ROCK1Q13464 1354 aa19.11■□□□□ 0.65
CHEK2-210ENST00000416671 ZCCHC11Q5TAX3 1644 aaKnown RBP19.1■□□□□ 0.65
CHEK2-210ENST00000416671 CDC42BPAQ5VT25 1732 aa19.1■□□□□ 0.65
CHEK2-210ENST00000416671 ITSN2Q9NZM3 1697 aa19.08■□□□□ 0.65
CHEK2-210ENST00000416671 SLC4A1APQ9BWU0 796 aaKnown RBP19.08■□□□□ 0.64
CHEK2-210ENST00000416671 UHRF1BP1LA0JNW5 1464 aa19.08■□□□□ 0.64
CHEK2-210ENST00000416671 L3MBTL2Q969R5 705 aa19.05■□□□□ 0.64
CHEK2-210ENST00000416671 DEKP35659 375 aaKnown RBP19.05■□□□□ 0.64
CHEK2-210ENST00000416671 IRX6P78412 446 aaPredicted RBP19.05■□□□□ 0.64
CHEK2-210ENST00000416671 TTC37Q6PGP7 1564 aa19.05■□□□□ 0.64
CHEK2-210ENST00000416671 NCOA1Q15788 1441 aa19.04■□□□□ 0.64
CHEK2-210ENST00000416671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.03■□□□□ 0.64
CHEK2-210ENST00000416671 HNRNPMP52272 730 aaKnown RBP eCLIP19.03■□□□□ 0.64
CHEK2-210ENST00000416671 HNRNPUQ00839 825 aaKnown RBP eCLIP19.03■□□□□ 0.64
CHEK2-210ENST00000416671 ERICH6BQ5W0A0 696 aa19.03■□□□□ 0.64
CHEK2-210ENST00000416671 ANKRD30BQ9BXX2 1392 aa19.01■□□□□ 0.63
CHEK2-210ENST00000416671 PRKCSHP14314 528 aaPredicted RBP19.01■□□□□ 0.63
CHEK2-210ENST00000416671 CDC42BPBQ9Y5S2 1711 aa19■□□□□ 0.63
CHEK2-210ENST00000416671 PPP4R2Q9NY27 417 aa18.99■□□□□ 0.63
CHEK2-210ENST00000416671 HSPA5P11021 654 aaKnown RBP18.98■□□□□ 0.63
CHEK2-210ENST00000416671 CROCC2H7BZ55 1655 aa18.97■□□□□ 0.63
CHEK2-210ENST00000416671 ADGBQ8N7X0 1667 aa18.97■□□□□ 0.63
CHEK2-210ENST00000416671 ANKRD30AQ9BXX3 1397 aa18.97■□□□□ 0.63
CHEK2-210ENST00000416671 PZPP20742 1482 aa18.97■□□□□ 0.63
CHEK2-210ENST00000416671 PREX2Q70Z35 1606 aa18.96■□□□□ 0.63
CHEK2-210ENST00000416671 ARHGAP5Q13017 1502 aa18.96■□□□□ 0.63
CHEK2-210ENST00000416671 SAMD9LQ8IVG5 1584 aa18.95■□□□□ 0.62
CHEK2-210ENST00000416671 RPRD2Q5VT52 1461 aaKnown RBP18.95■□□□□ 0.62
CHEK2-210ENST00000416671 NBPF8Q3BBV2 869 aa18.94■□□□□ 0.62
CHEK2-210ENST00000416671 ADGRL2O95490 1459 aa18.94■□□□□ 0.62
CHEK2-210ENST00000416671 C9orf84Q5VXU9 1444 aa18.93■□□□□ 0.62
CHEK2-210ENST00000416671 ANKRD50Q9ULJ7 1429 aa18.93■□□□□ 0.62
CHEK2-210ENST00000416671 TSPY4P0CV99 314 aa18.92■□□□□ 0.62
CHEK2-210ENST00000416671 TSPY10P0CW01 314 aa18.92■□□□□ 0.62
CHEK2-210ENST00000416671 PKD2Q13563 968 aa18.92■□□□□ 0.62
CHEK2-210ENST00000416671 CYB5RLQ6IPT4 315 aa18.92■□□□□ 0.62
CHEK2-210ENST00000416671 EIF4G2P78344 907 aaKnown RBP eCLIP18.91■□□□□ 0.62
CHEK2-210ENST00000416671 WDR7Q9Y4E6 1490 aa18.91■□□□□ 0.62
CHEK2-210ENST00000416671 ASXL2Q76L83 1435 aa18.91■□□□□ 0.62
CHEK2-210ENST00000416671 MBD5Q9P267 1494 aa18.91■□□□□ 0.62
CHEK2-210ENST00000416671 WASHC2AQ641Q2 1341 aa18.91■□□□□ 0.62
CHEK2-210ENST00000416671 MYO5CQ9NQX4 1742 aa18.9■□□□□ 0.62
CHEK2-210ENST00000416671 TEX14Q8IWB6 1497 aa18.9■□□□□ 0.62
CHEK2-210ENST00000416671 NPM1P06748 294 aaKnown RBP eCLIP18.9■□□□□ 0.62
CHEK2-210ENST00000416671 SYCP2Q9BX26 1530 aa18.89■□□□□ 0.62
CHEK2-210ENST00000416671 PLCH2O75038 1416 aa18.88■□□□□ 0.61
CHEK2-210ENST00000416671 NUP155O75694 1391 aa18.88■□□□□ 0.61
CHEK2-210ENST00000416671 NOP58Q9Y2X3 529 aaKnown RBP18.88■□□□□ 0.61
CHEK2-210ENST00000416671 C11orf95C9JLR9 678 aaPredicted RBP18.87■□□□□ 0.61
CHEK2-210ENST00000416671 ZNF326Q5BKZ1 582 aaKnown RBP18.87■□□□□ 0.61
CHEK2-210ENST00000416671 ARHGEF12Q9NZN5 1544 aa18.86■□□□□ 0.61
CHEK2-210ENST00000416671 KIAA1107Q9UPP5 1409 aa18.86■□□□□ 0.61
CHEK2-210ENST00000416671 KIF15Q9NS87 1388 aa18.85■□□□□ 0.61
CHEK2-210ENST00000416671 EFCAB2Q5VUJ9 269 aa18.85■□□□□ 0.61
CHEK2-210ENST00000416671 SHANK2Q9UPX8 1470 aa18.84■□□□□ 0.61
CHEK2-210ENST00000416671 CCDC141Q6ZP82 1450 aa18.83■□□□□ 0.61
CHEK2-210ENST00000416671 B4GALNT3Q6L9W6 998 aa18.83■□□□□ 0.6
CHEK2-210ENST00000416671 NBR1Q14596 966 aa18.83■□□□□ 0.6
CHEK2-210ENST00000416671 ARHGEF5Q12774 1597 aa18.82■□□□□ 0.6
CHEK2-210ENST00000416671 RIMBP3CA6NJZ7 1639 aa18.82■□□□□ 0.6
CHEK2-210ENST00000416671 RIMBP3BA6NNM3 1639 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms