RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 ERCC6Q03468 1493 aa20.53■□□□□ 0.88
LINC00475-202ENST00000416438 GRIN2AQ12879 1464 aa20.53■□□□□ 0.88
LINC00475-202ENST00000416438 GCC2Q8IWJ2 1684 aa20.53■□□□□ 0.88
LINC00475-202ENST00000416438 AKNAQ7Z591 1439 aa20.51■□□□□ 0.87
LINC00475-202ENST00000416438 CCDC184Q52MB2 194 aa20.51■□□□□ 0.87
LINC00475-202ENST00000416438 NBPF8Q3BBV2 869 aa20.49■□□□□ 0.87
LINC00475-202ENST00000416438 NUP153P49790 1475 aaKnown RBP20.48■□□□□ 0.87
LINC00475-202ENST00000416438 DAPK1P53355 1430 aa20.48■□□□□ 0.87
LINC00475-202ENST00000416438 ABCC5O15440 1437 aa20.47■□□□□ 0.87
LINC00475-202ENST00000416438 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
LINC00475-202ENST00000416438 FBLN2P98095 1184 aa20.47■□□□□ 0.87
LINC00475-202ENST00000416438 SLC4A1APQ9BWU0 796 aaKnown RBP20.46■□□□□ 0.87
LINC00475-202ENST00000416438 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
LINC00475-202ENST00000416438 ANKRD30BQ9BXX2 1392 aa20.45■□□□□ 0.86
LINC00475-202ENST00000416438 RAPGEF6Q8TEU7 1601 aa20.44■□□□□ 0.86
LINC00475-202ENST00000416438 ROCK1Q13464 1354 aa20.41■□□□□ 0.86
LINC00475-202ENST00000416438 CNTLNQ9NXG0 1405 aa20.4■□□□□ 0.86
LINC00475-202ENST00000416438 CEP170Q5SW79 1584 aa20.4■□□□□ 0.86
LINC00475-202ENST00000416438 CCDC7Q96M83 1385 aa20.4■□□□□ 0.86
LINC00475-202ENST00000416438 MAGI1Q96QZ7 1491 aaPredicted RBP20.4■□□□□ 0.86
LINC00475-202ENST00000416438 ZNF777Q9ULD5 760 aaPredicted RBP20.4■□□□□ 0.86
LINC00475-202ENST00000416438 CDK11AQ9UQ88 783 aaPredicted RBP20.39■□□□□ 0.85
LINC00475-202ENST00000416438 RBM19Q9Y4C8 960 aaKnown RBP20.39■□□□□ 0.85
LINC00475-202ENST00000416438 PRG4Q92954 1404 aaPredicted RBP20.39■□□□□ 0.85
LINC00475-202ENST00000416438 FAM9BQ8IZU0 186 aa20.38■□□□□ 0.85
LINC00475-202ENST00000416438 RPRD2Q5VT52 1461 aaKnown RBP20.38■□□□□ 0.85
LINC00475-202ENST00000416438 PRKRIP1Q9H875 184 aaPredicted RBP20.38■□□□□ 0.85
LINC00475-202ENST00000416438 PLB1Q6P1J6 1458 aa20.38■□□□□ 0.85
LINC00475-202ENST00000416438 SYNJ2O15056 1496 aa20.38■□□□□ 0.85
LINC00475-202ENST00000416438 NCOA1Q15788 1441 aa20.37■□□□□ 0.85
LINC00475-202ENST00000416438 CFDP1Q9UEE9 299 aaPredicted RBP20.36■□□□□ 0.85
LINC00475-202ENST00000416438 DNMT1P26358 1616 aaKnown RBP20.35■□□□□ 0.85
LINC00475-202ENST00000416438 TEX14Q8IWB6 1497 aa20.34■□□□□ 0.85
LINC00475-202ENST00000416438 KIF7Q2M1P5 1343 aa20.34■□□□□ 0.85
LINC00475-202ENST00000416438 CNGB1Q14028 1251 aaPredicted RBP20.34■□□□□ 0.85
LINC00475-202ENST00000416438 ANP32EQ9BTT0 268 aa20.33■□□□□ 0.85
LINC00475-202ENST00000416438 MRS2Q9HD23 443 aa20.33■□□□□ 0.85
LINC00475-202ENST00000416438 JPH4Q96JJ6 628 aa20.32■□□□□ 0.84
LINC00475-202ENST00000416438 TROQ12816 1431 aaPredicted RBP20.32■□□□□ 0.84
LINC00475-202ENST00000416438 ZNF326Q5BKZ1 582 aaKnown RBP20.31■□□□□ 0.84
LINC00475-202ENST00000416438 SPATA31E1Q6ZUB1 1445 aa20.29■□□□□ 0.84
LINC00475-202ENST00000416438 POLR3GLQ9BT43 218 aa20.28■□□□□ 0.84
LINC00475-202ENST00000416438 PZPP20742 1482 aa20.28■□□□□ 0.84
LINC00475-202ENST00000416438 CAMSAP2Q08AD1 1489 aa20.27■□□□□ 0.84
LINC00475-202ENST00000416438 KIF14Q15058 1648 aa20.27■□□□□ 0.84
LINC00475-202ENST00000416438 NUP160Q12769 1436 aa20.27■□□□□ 0.84
LINC00475-202ENST00000416438 CARMIL2Q6F5E8 1435 aa20.27■□□□□ 0.84
LINC00475-202ENST00000416438 PKD2Q13563 968 aa20.26■□□□□ 0.83
LINC00475-202ENST00000416438 GPATCH8Q9UKJ3 1502 aaKnown RBP20.26■□□□□ 0.83
LINC00475-202ENST00000416438 ITSN2Q9NZM3 1697 aa20.2■□□□□ 0.82
LINC00475-202ENST00000416438 KIAA1107Q9UPP5 1409 aa20.2■□□□□ 0.82
LINC00475-202ENST00000416438 ADCY10Q96PN6 1610 aa20.18■□□□□ 0.82
LINC00475-202ENST00000416438 SENP3-EIF4A1A0A087X0R7 540 aa20.18■□□□□ 0.82
LINC00475-202ENST00000416438 ZBED9Q6R2W3 1325 aa20.17■□□□□ 0.82
LINC00475-202ENST00000416438 ANKRD30AQ9BXX3 1397 aa20.17■□□□□ 0.82
LINC00475-202ENST00000416438 USP47Q96K76 1375 aa20.17■□□□□ 0.82
LINC00475-202ENST00000416438 PLEKHD1A6NEE1 506 aa20.16■□□□□ 0.82
LINC00475-202ENST00000416438 ANKRD50Q9ULJ7 1429 aa20.15■□□□□ 0.82
LINC00475-202ENST00000416438 ABCA8O94911 1581 aa20.14■□□□□ 0.82
LINC00475-202ENST00000416438 ATP10BO94823 1461 aa20.14■□□□□ 0.82
LINC00475-202ENST00000416438 PPP4R2Q9NY27 417 aa20.14■□□□□ 0.82
LINC00475-202ENST00000416438 NUP155O75694 1391 aa20.14■□□□□ 0.81
LINC00475-202ENST00000416438 DHX29Q7Z478 1369 aaKnown RBP20.13■□□□□ 0.81
LINC00475-202ENST00000416438 ADGBQ8N7X0 1667 aa20.13■□□□□ 0.81
LINC00475-202ENST00000416438 B4GALNT3Q6L9W6 998 aa20.13■□□□□ 0.81
LINC00475-202ENST00000416438 KDM2AQ9Y2K7 1162 aa20.13■□□□□ 0.81
LINC00475-202ENST00000416438 MBD5Q9P267 1494 aa20.13■□□□□ 0.81
LINC00475-202ENST00000416438 ADGRL2O95490 1459 aa20.13■□□□□ 0.81
LINC00475-202ENST00000416438 MSH5O43196 834 aa20.12■□□□□ 0.81
LINC00475-202ENST00000416438 CROCC2H7BZ55 1655 aa20.11■□□□□ 0.81
LINC00475-202ENST00000416438 HNRNPMP52272 730 aaKnown RBP eCLIP20.11■□□□□ 0.81
LINC00475-202ENST00000416438 BCORL1Q5H9F3 1711 aa20.09■□□□□ 0.81
LINC00475-202ENST00000416438 CDC42BPAQ5VT25 1732 aa20.09■□□□□ 0.81
LINC00475-202ENST00000416438 ABCC10Q5T3U5 1492 aa20.09■□□□□ 0.81
LINC00475-202ENST00000416438 ERICH6BQ5W0A0 696 aa20.09■□□□□ 0.81
LINC00475-202ENST00000416438 TSPY4P0CV99 314 aa20.08■□□□□ 0.81
LINC00475-202ENST00000416438 TSPY10P0CW01 314 aa20.08■□□□□ 0.81
LINC00475-202ENST00000416438 CARD11Q9BXL7 1154 aa20.08■□□□□ 0.81
LINC00475-202ENST00000416438 C9orf84Q5VXU9 1444 aa20.06■□□□□ 0.8
LINC00475-202ENST00000416438 DCAF11Q8TEB1 546 aa20.05■□□□□ 0.8
LINC00475-202ENST00000416438 PTPRGP23470 1445 aa20.05■□□□□ 0.8
LINC00475-202ENST00000416438 POLR1AO95602 1720 aaPredicted RBP20.04■□□□□ 0.8
LINC00475-202ENST00000416438 ST20-MTHFSA0A0A6YYL1 179 aa20.04■□□□□ 0.8
LINC00475-202ENST00000416438 KDM5CP41229 1560 aa20.02■□□□□ 0.8
LINC00475-202ENST00000416438 KIF15Q9NS87 1388 aa20■□□□□ 0.79
LINC00475-202ENST00000416438 TMC1Q8TDI8 760 aa19.99■□□□□ 0.79
LINC00475-202ENST00000416438 UHRF1BP1Q6BDS2 1440 aa19.99■□□□□ 0.79
LINC00475-202ENST00000416438 PNISRQ8TF01 805 aaKnown RBP19.99■□□□□ 0.79
LINC00475-202ENST00000416438 FANCIQ9NVI1 1328 aa19.98■□□□□ 0.79
LINC00475-202ENST00000416438 SHANK2Q9UPX8 1470 aa19.98■□□□□ 0.79
LINC00475-202ENST00000416438 ARID4BQ4LE39 1312 aaPredicted RBP19.98■□□□□ 0.79
LINC00475-202ENST00000416438 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
LINC00475-202ENST00000416438 RALGAPBQ86X10 1494 aa19.97■□□□□ 0.79
LINC00475-202ENST00000416438 SMG6Q86US8 1419 aaKnown RBP19.96■□□□□ 0.79
LINC00475-202ENST00000416438 CHD1O14646 1710 aa19.96■□□□□ 0.79
LINC00475-202ENST00000416438 RGL3Q3MIN7 710 aa19.95■□□□□ 0.78
LINC00475-202ENST00000416438 ROCK2O75116 1388 aaKnown RBP19.92■□□□□ 0.78
LINC00475-202ENST00000416438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.92■□□□□ 0.78
LINC00475-202ENST00000416438 SAMD9LQ8IVG5 1584 aa19.91■□□□□ 0.78
LINC00475-202ENST00000416438 CDC42BPBQ9Y5S2 1711 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms