RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 POGZQ7Z3K3 1410 aa27.41■■□□□ 1.98
CDC42EP1-202ENST00000415670 CFAP74Q9C0B2 1584 aa27.39■■□□□ 1.98
CDC42EP1-202ENST00000415670 EFCAB5A4FU69 1503 aa27.38■■□□□ 1.97
CDC42EP1-202ENST00000415670 ILDR2Q71H61 639 aa27.37■■□□□ 1.97
CDC42EP1-202ENST00000415670 ATP1B4Q9UN42 357 aaPredicted RBP27.36■■□□□ 1.97
CDC42EP1-202ENST00000415670 PLCH2O75038 1416 aa27.35■■□□□ 1.97
CDC42EP1-202ENST00000415670 MAGI2Q86UL8 1455 aa27.32■■□□□ 1.96
CDC42EP1-202ENST00000415670 ATP10AO60312 1499 aa27.31■■□□□ 1.96
CDC42EP1-202ENST00000415670 ARHGEF12Q9NZN5 1544 aa27.31■■□□□ 1.96
CDC42EP1-202ENST00000415670 EEA1Q15075 1411 aa27.3■■□□□ 1.96
CDC42EP1-202ENST00000415670 AFAP1Q8N556 730 aa27.29■■□□□ 1.96
CDC42EP1-202ENST00000415670 STRCQ7RTU9 1775 aa27.29■■□□□ 1.96
CDC42EP1-202ENST00000415670 C9orf84Q5VXU9 1444 aa27.24■■□□□ 1.95
CDC42EP1-202ENST00000415670 KIF14Q15058 1648 aa27.24■■□□□ 1.95
CDC42EP1-202ENST00000415670 EFCAB2Q5VUJ9 269 aa27.24■■□□□ 1.95
CDC42EP1-202ENST00000415670 PREX1Q8TCU6 1659 aa27.23■■□□□ 1.95
CDC42EP1-202ENST00000415670 DISP3Q9P2K9 1392 aa27.22■■□□□ 1.95
CDC42EP1-202ENST00000415670 MYO5CQ9NQX4 1742 aa27.19■■□□□ 1.94
CDC42EP1-202ENST00000415670 MYT1LQ9UL68 1186 aa27.18■■□□□ 1.94
CDC42EP1-202ENST00000415670 UBTFP17480 764 aaKnown RBP27.14■■□□□ 1.94
CDC42EP1-202ENST00000415670 ARHGAP35Q9NRY4 1499 aa27.13■■□□□ 1.93
CDC42EP1-202ENST00000415670 LRRIQ1Q96JM4 1722 aa27.12■■□□□ 1.93
CDC42EP1-202ENST00000415670 ARHGAP5Q13017 1502 aa27.11■■□□□ 1.93
CDC42EP1-202ENST00000415670 DIP2CQ9Y2E4 1556 aa27.1■■□□□ 1.93
CDC42EP1-202ENST00000415670 UHRF1BP1Q6BDS2 1440 aa27.09■■□□□ 1.93
CDC42EP1-202ENST00000415670 ZNF518AQ6AHZ1 1483 aa27.09■■□□□ 1.93
CDC42EP1-202ENST00000415670 KDM5CP41229 1560 aa27.09■■□□□ 1.93
CDC42EP1-202ENST00000415670 C3P01024 1663 aa27.08■■□□□ 1.93
CDC42EP1-202ENST00000415670 SETD1BQ9UPS6 1966 aaKnown RBP27.08■■□□□ 1.93
CDC42EP1-202ENST00000415670 DMRT2Q9Y5R5 561 aa27.07■■□□□ 1.92
CDC42EP1-202ENST00000415670 ABCA6Q8N139 1617 aa27.07■■□□□ 1.92
CDC42EP1-202ENST00000415670 CDC42BPBQ9Y5S2 1711 aa27.07■■□□□ 1.92
CDC42EP1-202ENST00000415670 TRAPPC8Q9Y2L5 1435 aa27.07■■□□□ 1.92
CDC42EP1-202ENST00000415670 SOCS7O14512 581 aa27.06■■□□□ 1.92
CDC42EP1-202ENST00000415670 TROQ12816 1431 aaPredicted RBP27.06■■□□□ 1.92
CDC42EP1-202ENST00000415670 CDK11AQ9UQ88 783 aaPredicted RBP27.04■■□□□ 1.92
CDC42EP1-202ENST00000415670 FMN1Q68DA7 1419 aa27.03■■□□□ 1.92
CDC42EP1-202ENST00000415670 LTBP4Q8N2S1 1624 aa27.01■■□□□ 1.91
CDC42EP1-202ENST00000415670 PTPRTO14522 1441 aa26.99■■□□□ 1.91
CDC42EP1-202ENST00000415670 MLH3Q9UHC1 1453 aa26.97■■□□□ 1.91
CDC42EP1-202ENST00000415670 REREQ9P2R6 1566 aa26.94■■□□□ 1.9
CDC42EP1-202ENST00000415670 KIDINS220Q9ULH0 1771 aa26.94■■□□□ 1.9
CDC42EP1-202ENST00000415670 NCKAP5LQ9HCH0 1330 aa26.93■■□□□ 1.9
CDC42EP1-202ENST00000415670 ESF1Q9H501 851 aaKnown RBP26.93■■□□□ 1.9
CDC42EP1-202ENST00000415670 CLIP1P30622 1438 aa26.92■■□□□ 1.9
CDC42EP1-202ENST00000415670 SPATA31D1Q6ZQQ2 1576 aa26.92■■□□□ 1.9
CDC42EP1-202ENST00000415670 ABCC1P33527 1531 aa26.91■■□□□ 1.9
CDC42EP1-202ENST00000415670 ITSN2Q9NZM3 1697 aa26.91■■□□□ 1.9
CDC42EP1-202ENST00000415670 NCOA1Q15788 1441 aa26.9■■□□□ 1.9
CDC42EP1-202ENST00000415670 AGLP35573 1532 aa26.9■■□□□ 1.9
CDC42EP1-202ENST00000415670 ZNF777Q9ULD5 760 aaPredicted RBP26.89■■□□□ 1.9
CDC42EP1-202ENST00000415670 PREX2Q70Z35 1606 aa26.89■■□□□ 1.9
CDC42EP1-202ENST00000415670 CAMSAP1Q5T5Y3 1602 aa26.86■■□□□ 1.89
CDC42EP1-202ENST00000415670 ZNF335Q9H4Z2 1342 aaPredicted RBP26.86■■□□□ 1.89
CDC42EP1-202ENST00000415670 HNRNPMP52272 730 aaKnown RBP eCLIP26.85■■□□□ 1.89
CDC42EP1-202ENST00000415670 CDC42BPAQ5VT25 1732 aa26.85■■□□□ 1.89
CDC42EP1-202ENST00000415670 ZMYM3Q14202 1370 aa26.83■■□□□ 1.88
CDC42EP1-202ENST00000415670 SUPT6HQ7KZ85 1726 aaKnown RBP26.81■■□□□ 1.88
CDC42EP1-202ENST00000415670 SAMD9LQ8IVG5 1584 aa26.8■■□□□ 1.88
CDC42EP1-202ENST00000415670 CASKIN1Q8WXD9 1431 aa26.77■■□□□ 1.88
CDC42EP1-202ENST00000415670 CNTLNQ9NXG0 1405 aa26.76■■□□□ 1.87
CDC42EP1-202ENST00000415670 UBAP1LF5GYI3 381 aa26.76■■□□□ 1.87
CDC42EP1-202ENST00000415670 SYCP2Q9BX26 1530 aa26.75■■□□□ 1.87
CDC42EP1-202ENST00000415670 SPAG9O60271 1321 aaKnown RBP26.74■■□□□ 1.87
CDC42EP1-202ENST00000415670 CLTCQ00610 1675 aaKnown RBP26.74■■□□□ 1.87
CDC42EP1-202ENST00000415670 GPATCH8Q9UKJ3 1502 aaKnown RBP26.72■■□□□ 1.87
CDC42EP1-202ENST00000415670 NPATQ14207 1427 aa26.72■■□□□ 1.87
CDC42EP1-202ENST00000415670 MROH2AA6NES4 1674 aa26.71■■□□□ 1.87
CDC42EP1-202ENST00000415670 IQSEC2Q5JU85 1478 aa26.71■■□□□ 1.87
CDC42EP1-202ENST00000415670 GGT6Q6P531 493 aa26.71■■□□□ 1.87
CDC42EP1-202ENST00000415670 LOC105371045A0A1W2PR82 267 aa26.7■■□□□ 1.86
CDC42EP1-202ENST00000415670 CCDC18Q5T9S5 1454 aa26.68■■□□□ 1.86
CDC42EP1-202ENST00000415670 PTPRKQ15262 1439 aa26.68■■□□□ 1.86
CDC42EP1-202ENST00000415670 ZNF644Q9H582 1327 aaPredicted RBP26.65■■□□□ 1.86
CDC42EP1-202ENST00000415670 MYO3AQ8NEV4 1616 aa26.65■■□□□ 1.86
CDC42EP1-202ENST00000415670 ATP7AQ04656 1500 aa26.64■■□□□ 1.85
CDC42EP1-202ENST00000415670 A2MP01023 1474 aa26.63■■□□□ 1.85
CDC42EP1-202ENST00000415670 CFDP1Q9UEE9 299 aaPredicted RBP26.61■■□□□ 1.85
CDC42EP1-202ENST00000415670 PLXNC1O60486 1568 aa26.61■■□□□ 1.85
CDC42EP1-202ENST00000415670 CEP170BQ9Y4F5 1589 aaPredicted RBP26.61■■□□□ 1.85
CDC42EP1-202ENST00000415670 TCOF1Q13428 1488 aaKnown RBP26.61■■□□□ 1.85
CDC42EP1-202ENST00000415670 PKD2Q13563 968 aa26.6■■□□□ 1.85
CDC42EP1-202ENST00000415670 ZNF142P52746 1687 aaPredicted RBP26.6■■□□□ 1.85
CDC42EP1-202ENST00000415670 INO80Q9ULG1 1556 aaPredicted RBP26.59■■□□□ 1.85
CDC42EP1-202ENST00000415670 FBXO31Q5XUX0 539 aaPredicted RBP26.59■■□□□ 1.85
CDC42EP1-202ENST00000415670 HSPA1LP34931 641 aa26.58■■□□□ 1.85
CDC42EP1-202ENST00000415670 PIP4K2BP78356 416 aa26.58■■□□□ 1.85
CDC42EP1-202ENST00000415670 FYCO1Q9BQS8 1478 aa26.57■■□□□ 1.84
CDC42EP1-202ENST00000415670 PPP6R1Q9UPN7 881 aa26.57■■□□□ 1.84
CDC42EP1-202ENST00000415670 PLA2R1Q13018 1463 aa26.56■■□□□ 1.84
CDC42EP1-202ENST00000415670 SCAF1Q9H7N4 1312 aaKnown RBP26.56■■□□□ 1.84
CDC42EP1-202ENST00000415670 KIAA1107Q9UPP5 1409 aa26.54■■□□□ 1.84
CDC42EP1-202ENST00000415670 CCNB3Q8WWL7 1395 aa26.53■■□□□ 1.84
CDC42EP1-202ENST00000415670 DNMT1P26358 1616 aaKnown RBP26.52■■□□□ 1.84
CDC42EP1-202ENST00000415670 A2ML1A8K2U0 1454 aa26.48■■□□□ 1.83
CDC42EP1-202ENST00000415670 SENP3Q9H4L4 574 aaPredicted RBP26.46■■□□□ 1.83
CDC42EP1-202ENST00000415670 MBD5Q9P267 1494 aa26.46■■□□□ 1.83
CDC42EP1-202ENST00000415670 NEURL4Q96JN8 1562 aa26.46■■□□□ 1.83
CDC42EP1-202ENST00000415670 ADGBQ8N7X0 1667 aa26.44■■□□□ 1.82
CDC42EP1-202ENST00000415670 PLEKHH2Q8IVE3 1493 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms