RNA–Protein interactions for RNA: ENST00000415191.6

C2CD3-205, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 2,587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-205ENST00000415191 ABCC5O15440 1437 aa27.24■■□□□ 1.95
C2CD3-205ENST00000415191 L3MBTL2Q969R5 705 aa27.22■■□□□ 1.95
C2CD3-205ENST00000415191 WASHC2AQ641Q2 1341 aa27.22■■□□□ 1.95
C2CD3-205ENST00000415191 CDK11AQ9UQ88 783 aaPredicted RBP27.22■■□□□ 1.95
C2CD3-205ENST00000415191 EIF4G2P78344 907 aaKnown RBP eCLIP27.2■■□□□ 1.95
C2CD3-205ENST00000415191 TSHZ2Q9NRE2 1034 aa27.17■■□□□ 1.94
C2CD3-205ENST00000415191 ANKRD30BQ9BXX2 1392 aa27.16■■□□□ 1.94
C2CD3-205ENST00000415191 NEFLP07196 543 aa27.15■■□□□ 1.94
C2CD3-205ENST00000415191 PRG4Q92954 1404 aaPredicted RBP27.14■■□□□ 1.93
C2CD3-205ENST00000415191 RPRD2Q5VT52 1461 aaKnown RBP27.13■■□□□ 1.93
C2CD3-205ENST00000415191 TROQ12816 1431 aaPredicted RBP27.12■■□□□ 1.93
C2CD3-205ENST00000415191 CHMP7Q8WUX9 453 aaPredicted RBP27.11■■□□□ 1.93
C2CD3-205ENST00000415191 SLC4A1APQ9BWU0 796 aaKnown RBP27.11■■□□□ 1.93
C2CD3-205ENST00000415191 MAGI1Q96QZ7 1491 aaPredicted RBP27.11■■□□□ 1.93
C2CD3-205ENST00000415191 ERCC6Q03468 1493 aa27.1■■□□□ 1.93
C2CD3-205ENST00000415191 CEP170Q5SW79 1584 aa27.1■■□□□ 1.93
C2CD3-205ENST00000415191 MYT1Q01538 1121 aa27.09■■□□□ 1.93
C2CD3-205ENST00000415191 PLB1Q6P1J6 1458 aa27.09■■□□□ 1.93
C2CD3-205ENST00000415191 CFDP1Q9UEE9 299 aaPredicted RBP27.08■■□□□ 1.93
C2CD3-205ENST00000415191 CAMSAP2Q08AD1 1489 aa27.08■■□□□ 1.93
C2CD3-205ENST00000415191 TEX14Q8IWB6 1497 aa27.07■■□□□ 1.92
C2CD3-205ENST00000415191 FBLN2P98095 1184 aa27.06■■□□□ 1.92
C2CD3-205ENST00000415191 NBPF8Q3BBV2 869 aa27.06■■□□□ 1.92
C2CD3-205ENST00000415191 SYNJ2O15056 1496 aa27.06■■□□□ 1.92
C2CD3-205ENST00000415191 ITSN2Q9NZM3 1697 aa27.06■■□□□ 1.92
C2CD3-205ENST00000415191 CNTLNQ9NXG0 1405 aa27.06■■□□□ 1.92
C2CD3-205ENST00000415191 HNRNPUQ00839 825 aaKnown RBP eCLIP27.04■■□□□ 1.92
C2CD3-205ENST00000415191 C11orf95C9JLR9 678 aaPredicted RBP27.04■■□□□ 1.92
C2CD3-205ENST00000415191 NCOA1Q15788 1441 aa27.03■■□□□ 1.92
C2CD3-205ENST00000415191 GPATCH8Q9UKJ3 1502 aaKnown RBP27.03■■□□□ 1.92
C2CD3-205ENST00000415191 KIF14Q15058 1648 aa27.03■■□□□ 1.92
C2CD3-205ENST00000415191 CCDC7Q96M83 1385 aa27.02■■□□□ 1.92
C2CD3-205ENST00000415191 ZNF777Q9ULD5 760 aaPredicted RBP27.02■■□□□ 1.92
C2CD3-205ENST00000415191 ADGBQ8N7X0 1667 aa27.01■■□□□ 1.91
C2CD3-205ENST00000415191 PZPP20742 1482 aa27■■□□□ 1.91
C2CD3-205ENST00000415191 ADCY10Q96PN6 1610 aa26.99■■□□□ 1.91
C2CD3-205ENST00000415191 CARMIL2Q6F5E8 1435 aa26.98■■□□□ 1.91
C2CD3-205ENST00000415191 JPH4Q96JJ6 628 aa26.97■■□□□ 1.91
C2CD3-205ENST00000415191 CROCC2H7BZ55 1655 aa26.94■■□□□ 1.9
C2CD3-205ENST00000415191 NUP160Q12769 1436 aa26.94■■□□□ 1.9
C2CD3-205ENST00000415191 ADGRL2O95490 1459 aa26.93■■□□□ 1.9
C2CD3-205ENST00000415191 SPATA31E1Q6ZUB1 1445 aa26.92■■□□□ 1.9
C2CD3-205ENST00000415191 CCDC184Q52MB2 194 aa26.92■■□□□ 1.9
C2CD3-205ENST00000415191 PRKRIP1Q9H875 184 aaPredicted RBP26.91■■□□□ 1.9
C2CD3-205ENST00000415191 ANKRD30AQ9BXX3 1397 aa26.9■■□□□ 1.9
C2CD3-205ENST00000415191 KIF7Q2M1P5 1343 aa26.89■■□□□ 1.9
C2CD3-205ENST00000415191 KIAA1107Q9UPP5 1409 aa26.89■■□□□ 1.89
C2CD3-205ENST00000415191 POLR1AO95602 1720 aaPredicted RBP26.88■■□□□ 1.89
C2CD3-205ENST00000415191 PLEKHD1A6NEE1 506 aa26.86■■□□□ 1.89
C2CD3-205ENST00000415191 PKD2Q13563 968 aa26.86■■□□□ 1.89
C2CD3-205ENST00000415191 CDC42BPAQ5VT25 1732 aa26.85■■□□□ 1.89
C2CD3-205ENST00000415191 ANKRD50Q9ULJ7 1429 aa26.84■■□□□ 1.89
C2CD3-205ENST00000415191 ABCA8O94911 1581 aa26.83■■□□□ 1.89
C2CD3-205ENST00000415191 MBD5Q9P267 1494 aa26.83■■□□□ 1.89
C2CD3-205ENST00000415191 MRS2Q9HD23 443 aa26.82■■□□□ 1.88
C2CD3-205ENST00000415191 ZNF326Q5BKZ1 582 aaKnown RBP26.8■■□□□ 1.88
C2CD3-205ENST00000415191 FAM9BQ8IZU0 186 aa26.8■■□□□ 1.88
C2CD3-205ENST00000415191 ATP10BO94823 1461 aa26.8■■□□□ 1.88
C2CD3-205ENST00000415191 ABCC10Q5T3U5 1492 aa26.79■■□□□ 1.88
C2CD3-205ENST00000415191 C9orf84Q5VXU9 1444 aa26.77■■□□□ 1.88
C2CD3-205ENST00000415191 IRX6P78412 446 aaPredicted RBP26.76■■□□□ 1.87
C2CD3-205ENST00000415191 SHANK2Q9UPX8 1470 aa26.75■■□□□ 1.87
C2CD3-205ENST00000415191 USP47Q96K76 1375 aa26.75■■□□□ 1.87
C2CD3-205ENST00000415191 NUP155O75694 1391 aa26.74■■□□□ 1.87
C2CD3-205ENST00000415191 BCORL1Q5H9F3 1711 aa26.71■■□□□ 1.87
C2CD3-205ENST00000415191 TSPY4P0CV99 314 aa26.71■■□□□ 1.87
C2CD3-205ENST00000415191 TSPY10P0CW01 314 aa26.71■■□□□ 1.87
C2CD3-205ENST00000415191 POLR3GLQ9BT43 218 aa26.69■■□□□ 1.86
C2CD3-205ENST00000415191 RBM19Q9Y4C8 960 aaKnown RBP26.68■■□□□ 1.86
C2CD3-205ENST00000415191 ZBED9Q6R2W3 1325 aa26.68■■□□□ 1.86
C2CD3-205ENST00000415191 KDM5CP41229 1560 aa26.67■■□□□ 1.86
C2CD3-205ENST00000415191 HNRNPMP52272 730 aaKnown RBP eCLIP26.67■■□□□ 1.86
C2CD3-205ENST00000415191 DHX29Q7Z478 1369 aaKnown RBP26.65■■□□□ 1.86
C2CD3-205ENST00000415191 KIF15Q9NS87 1388 aa26.65■■□□□ 1.86
C2CD3-205ENST00000415191 UHRF1BP1Q6BDS2 1440 aa26.64■■□□□ 1.86
C2CD3-205ENST00000415191 KDM5DQ9BY66 1539 aa26.64■■□□□ 1.85
C2CD3-205ENST00000415191 CNGB1Q14028 1251 aaPredicted RBP26.63■■□□□ 1.85
C2CD3-205ENST00000415191 PTPRGP23470 1445 aa26.63■■□□□ 1.85
C2CD3-205ENST00000415191 RALGAPBQ86X10 1494 aa26.62■■□□□ 1.85
C2CD3-205ENST00000415191 ARHGEF5Q12774 1597 aa26.62■■□□□ 1.85
C2CD3-205ENST00000415191 ARHGEF12Q9NZN5 1544 aa26.6■■□□□ 1.85
C2CD3-205ENST00000415191 ARID4BQ4LE39 1312 aaPredicted RBP26.59■■□□□ 1.85
C2CD3-205ENST00000415191 CARD11Q9BXL7 1154 aa26.58■■□□□ 1.85
C2CD3-205ENST00000415191 ERICH6BQ5W0A0 696 aa26.58■■□□□ 1.85
C2CD3-205ENST00000415191 KDM2AQ9Y2K7 1162 aa26.57■■□□□ 1.84
C2CD3-205ENST00000415191 CDC42BPBQ9Y5S2 1711 aa26.56■■□□□ 1.84
C2CD3-205ENST00000415191 ANP32EQ9BTT0 268 aa26.56■■□□□ 1.84
C2CD3-205ENST00000415191 SAMD9LQ8IVG5 1584 aa26.56■■□□□ 1.84
C2CD3-205ENST00000415191 CCDC141Q6ZP82 1450 aa26.55■■□□□ 1.84
C2CD3-205ENST00000415191 PREX2Q70Z35 1606 aa26.54■■□□□ 1.84
C2CD3-205ENST00000415191 DCAF11Q8TEB1 546 aa26.53■■□□□ 1.84
C2CD3-205ENST00000415191 PPP4R2Q9NY27 417 aa26.53■■□□□ 1.84
C2CD3-205ENST00000415191 ROCK2O75116 1388 aaKnown RBP26.51■■□□□ 1.83
C2CD3-205ENST00000415191 FAM135AQ9P2D6 1515 aa26.49■■□□□ 1.83
C2CD3-205ENST00000415191 ST20-MTHFSA0A0A6YYL1 179 aa26.48■■□□□ 1.83
C2CD3-205ENST00000415191 RSPH4AQ5TD94 716 aa26.47■■□□□ 1.83
C2CD3-205ENST00000415191 CHD1O14646 1710 aa26.45■■□□□ 1.83
C2CD3-205ENST00000415191 SYCP2Q9BX26 1530 aa26.44■■□□□ 1.82
C2CD3-205ENST00000415191 TTC37Q6PGP7 1564 aa26.42■■□□□ 1.82
C2CD3-205ENST00000415191 ARHGAP5Q13017 1502 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms